BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0071.p (494 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777770.1| periplasmic trypsin-like serine endoprotease... 978 0.0 ref|YP_004753961.1| putative periplasmic serine protease [Collim... 658 0.0 emb|CBJ41200.1| periplasmic protease; contains two PDZ domain [R... 583 e-164 ref|YP_001893372.1| protease Do [Ralstonia pickettii 12J] >gi|24... 580 e-163 ref|YP_003750573.1| periplasmic protease; contains two pdz domai... 579 e-163 ref|NP_523111.1| protease signal peptide protein [Ralstonia sola... 579 e-163 emb|CCA87166.1| periplasmic protease; contains two PDZ domain [R... 578 e-163 ref|ZP_07674118.1| serine protease [Ralstonia sp. 5_7_47FAA] >gi... 577 e-162 ref|YP_001796606.1| periplasmic protease [Cupriavidus taiwanensi... 575 e-162 emb|CCA82848.1| periplasmic protease; contains two PDZ domain [b... 575 e-162 >ref|YP_003777770.1| periplasmic trypsin-like serine endoprotease [Herbaspirillum seropedicae SmR1] gb|ADJ65862.1| periplasmic trypsin-like serine endoprotease protein [Herbaspirillum seropedicae SmR1] Length = 494 Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust. Identities = 494/494 (100%), Positives = 494/494 (100%) Query: 1 MSRRIVFVRNTLAVMIAAVVGGSYVYFRGADLPSAHAAAVNAPLVASNSAPAAPAGPVVA 60 MSRRIVFVRNTLAVMIAAVVGGSYVYFRGADLPSAHAAAVNAPLVASNSAPAAPAGPVVA Sbjct: 1 MSRRIVFVRNTLAVMIAAVVGGSYVYFRGADLPSAHAAAVNAPLVASNSAPAAPAGPVVA 60 Query: 61 AATDFSGIVQRYGPAVVNISVTGKARKVADDDDNGLDPNDPFSEFFKRFGPQLQMPQQPR 120 AATDFSGIVQRYGPAVVNISVTGKARKVADDDDNGLDPNDPFSEFFKRFGPQLQMPQQPR Sbjct: 61 AATDFSGIVQRYGPAVVNISVTGKARKVADDDDNGLDPNDPFSEFFKRFGPQLQMPQQPR 120 Query: 121 IMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDA 180 IMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDA Sbjct: 121 IMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDA 180 Query: 181 KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAV 240 KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAV Sbjct: 181 KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAV 240 Query: 241 NPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRL 300 NPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRL Sbjct: 241 NPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRL 300 Query: 301 GVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLP 360 GVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLP Sbjct: 301 GVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLP 360 Query: 361 TLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKD 420 TLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKD Sbjct: 361 TLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKD 420 Query: 421 EQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLV 480 EQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLV Sbjct: 421 EQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLV 480 Query: 481 ERGDEKIFVPLALN 494 ERGDEKIFVPLALN Sbjct: 481 ERGDEKIFVPLALN 494 >ref|YP_004753961.1| putative periplasmic serine protease [Collimonas fungivorans Ter331] gb|AEK63138.1| putative periplasmic serine protease [Collimonas fungivorans Ter331] Length = 507 Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/498 (68%), Positives = 401/498 (80%), Gaps = 11/498 (2%) Query: 1 MSR--RIVFVRNTLAVMIAAVVGGSYVYFRGADL--PSAHAAAVNAPLVASNSAPAAPAG 56 MSR R F+R+ +A+ + V GG+Y++ + D+ +A+AA V V SN+APA Sbjct: 15 MSRQTRQTFIRSAIAIAVLVVAGGTYLHSKNGDIGIDNANAAIVAPAPVVSNTAPA---- 70 Query: 57 PVVAAATDFSGIVQRYGPAVVNISVTGKARKVA-DDDDNGLDPNDPFSEFFKRFGPQLQM 115 VA ATDFSGIV+R GPAVVNISVTGKA++ A D D+ LDPNDPFS+FFKRFGPQLQ+ Sbjct: 71 --VAVATDFSGIVERAGPAVVNISVTGKAKQSAVSDQDDELDPNDPFSQFFKRFGPQLQI 128 Query: 116 PQQPRIMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAV 175 P+ P+IM G GSGFIIS DGLILTNAHVV+GA EV VKLTDRREF+AKVLG DKQSDIAV Sbjct: 129 PRHPQIMRGEGSGFIISADGLILTNAHVVEGASEVTVKLTDRREFRAKVLGSDKQSDIAV 188 Query: 176 IRIDAKNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQ 235 IRIDAKNLP VQIG+P+ +VG+PVLAIGSPYGF+NTATAGI+SAKSRSLPDD YVPFIQ Sbjct: 189 IRIDAKNLPIVQIGNPALTRVGEPVLAIGSPYGFENTATAGIVSAKSRSLPDDTYVPFIQ 248 Query: 236 TDVAVNPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKV 295 TDVAVNPGNSGGPLF++ G+VIGINSQIYSQTGG+QGLSF+IPIDVA KVEQQLV HGKV Sbjct: 249 TDVAVNPGNSGGPLFNIKGEVIGINSQIYSQTGGYQGLSFAIPIDVATKVEQQLVKHGKV 308 Query: 296 TRGRLGVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDH 355 TR LGVSVQ++NQAL++SFGLK A GALVSSV+KGSPADK GLQ GDVI+ FNG I H Sbjct: 309 TRSHLGVSVQEVNQALAESFGLKSAAGALVSSVDKGSPADKGGLQTGDVILRFNGQPISH 368 Query: 356 SVDLPTLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVR 415 S DLP+LVADT PG+ +EV+R G+ +T+ V E + K + + Q RLGLA+R Sbjct: 369 SSDLPSLVADTAPGTASTIEVVRNGQPKTLTVKPTEAEAVKTASNDEGAGSQARLGLALR 428 Query: 416 PLDKDEQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKN 475 L DEQ Q+G GL+VED SGP+A+AGIQ GDVIL++NG PV+SV QLR+L + AGKN Sbjct: 429 QLSPDEQQQVGIHGGLVVEDASGPSALAGIQRGDVILSLNGKPVNSVEQLRQLVSKAGKN 488 Query: 476 VALLVERGDEKIFVPLAL 493 VALLV+R +KIFVPL L Sbjct: 489 VALLVQRDKDKIFVPLNL 506 >emb|CBJ41200.1| periplasmic protease; contains two PDZ domain [Ralstonia solanacearum CMR15] Length = 490 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 314/491 (63%), Positives = 370/491 (75%), Gaps = 5/491 (1%) Query: 4 RIVFVRNTLAVMIAAVVGGSYVYFRGADLPSAHAAAVNAPLVASNSAPAAPAGPVVAAAT 63 R R+ + + V G Y Y + AV APL A +A A+ A VA Sbjct: 3 RQTMARSAVGLAAVLAVAGGYAYLQK----DVMTRAVAAPLEAPATAQASAAPMAVAVPM 58 Query: 64 DFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQPRIM 122 DFS IV+RYGPAVVNIS T A++ + G+ P+DPF+EFF+RF PQ Q +++ Sbjct: 59 DFSAIVERYGPAVVNISTTAHAQRTSLQGLPPGVSPDDPFAEFFRRFMPQTPQQQGDQVV 118 Query: 123 HGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAKN 182 GLGSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI A N Sbjct: 119 KGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVLRIAAGN 178 Query: 183 LPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVNP 242 LPTVQIG P+ KVG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAVNP Sbjct: 179 LPTVQIGSPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNP 238 Query: 243 GNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLGV 302 GNSGGPLF+ G+VIGINSQIYSQTGG+QGLSF++PIDVAMKVEQQLV GKVTRGRLG+ Sbjct: 239 GNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMKVEQQLVATGKVTRGRLGI 298 Query: 303 SVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPTL 362 SVQ+++Q+L+DSF L K EGALV++VEK PA KAGLQ GDVI+ I HS DLP Sbjct: 299 SVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDVHIGHSGDLPEQ 358 Query: 363 VADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDEQ 422 VA+ PGST P++++R GK ++VTVGE K AK A S + D+GRLGLAVRPL +E+ Sbjct: 359 VAEIKPGSTVPLQIIRHGKPTALSVTVGEAKDAKVAANTSAAPDKGRLGLAVRPLQPEEK 418 Query: 423 AQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVER 482 Q G GL+V D SGPAA AGIQ GDVIL++NGTPVSS +LR L AGK+VALLV+R Sbjct: 419 RQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRALVDRAGKHVALLVQR 478 Query: 483 GDEKIFVPLAL 493 D KIFVPL L Sbjct: 479 DDAKIFVPLDL 489 >ref|YP_001893372.1| protease Do [Ralstonia pickettii 12J] ref|YP_002983715.1| protease Do [Ralstonia pickettii 12D] gb|ACD29945.1| protease Do [Ralstonia pickettii 12J] gb|ACS65043.1| protease Do [Ralstonia pickettii 12D] Length = 492 Score = 580 bits (1494), Expect = e-163, Method: Compositional matrix adjust. Identities = 316/485 (65%), Positives = 375/485 (77%), Gaps = 9/485 (1%) Query: 12 LAVMIAAVVGGSYVYFRGADLPSAHAAAVNAPLVASNSAPAAPAGPVVAAATDFSGIVQR 71 LA +IA V G Y Y + D+ + AA AP+ ++ A VAA DFSGIV+R Sbjct: 13 LAAVIA--VAGGYAYLQ-KDVITRAVAAPIAPVTTPQTS-MATPAVAVAAPMDFSGIVER 68 Query: 72 YGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQ--PRIMHGLGSG 128 YGPAVVNISVT A++ + G+ P+DPF++FFK F PQ MPQQ +I+ GLGSG Sbjct: 69 YGPAVVNISVTAHAQRTSMQGLPPGMSPDDPFADFFKHFMPQ--MPQQRGDQIVRGLGSG 126 Query: 129 FIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAKNLPTVQI 188 FI+S DGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI AKNLP VQI Sbjct: 127 FIVSSDGLILTNAHVVDGAQEVNVKLTDRREFKAKVLGVDKQSDVAVLRISAKNLPVVQI 186 Query: 189 GDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVNPGNSGGP 248 G P+ KVG+PV+AIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAVNPGNSGGP Sbjct: 187 GSPANTKVGEPVVAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNPGNSGGP 246 Query: 249 LFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLGVSVQDLN 308 LF+ +G+VIGINSQIYSQTGG+QGLSF+IPIDVAMKVEQQLV GKVTRGRLG++VQ+++ Sbjct: 247 LFNQHGEVIGINSQIYSQTGGYQGLSFAIPIDVAMKVEQQLVATGKVTRGRLGIAVQEVD 306 Query: 309 QALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPTLVADTPP 368 Q+L+DSF L K EGALV+SVE PA KAGLQ GDVI+ NG ID S DLP VAD P Sbjct: 307 QSLADSFNLPKPEGALVNSVESDGPAAKAGLQPGDVILQINGARIDRSGDLPEQVADIKP 366 Query: 369 GSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDEQAQLGGQ 428 G+T P+++MR GK T++VTVG K AK + + +QGRLGLAVRPL DE+ Q G Sbjct: 367 GTTVPLQIMRQGKPTTLSVTVGAAKDAKVASNDKAAPNQGRLGLAVRPLQPDEKRQSGLP 426 Query: 429 KGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVERGDEKIF 488 GL+V + SGP+A GIQ GDVIL++NGTPVSSV +LR L AGK+VALLV+R D KIF Sbjct: 427 GGLVVMEASGPSAKVGIQPGDVILSLNGTPVSSVQELRTLVERAGKHVALLVQRDDTKIF 486 Query: 489 VPLAL 493 VP+ L Sbjct: 487 VPVDL 491 >ref|YP_003750573.1| periplasmic protease; contains two pdz domain [Ralstonia solanacearum PSI07] emb|CBJ35975.1| periplasmic protease; contains two PDZ domain [Ralstonia solanacearum PSI07] Length = 490 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 296/431 (68%), Positives = 351/431 (81%), Gaps = 1/431 (0%) Query: 64 DFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQPRIM 122 DFSGIV+RYGPAVVNIS T A++ + G++P+DPF+EFFK F PQ+ Q +++ Sbjct: 59 DFSGIVERYGPAVVNISTTAHAQRTSIQGLPPGMNPDDPFAEFFKHFMPQMPQQQGDQVV 118 Query: 123 HGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAKN 182 GLGSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI A+N Sbjct: 119 KGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVLRIAARN 178 Query: 183 LPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVNP 242 LPTVQIG+P+ KVG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAVNP Sbjct: 179 LPTVQIGNPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNP 238 Query: 243 GNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLGV 302 GNSGGPLF+ G+VIGINSQIYSQTGG+QGLSF++PIDVAM+VEQQLV GKVTRGRLG+ Sbjct: 239 GNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMRVEQQLVATGKVTRGRLGI 298 Query: 303 SVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPTL 362 SVQ+++Q+L+DSF L K EGALV++VEK PA KAGLQ GDVI+ I HS DLP Sbjct: 299 SVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDAHIGHSGDLPEQ 358 Query: 363 VADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDEQ 422 VA+ PG+ P++++R GK T++VTVGE K AK A S + D+GRLGLAVRPL +E+ Sbjct: 359 VAEIKPGTNVPLQIIRHGKPTTLSVTVGEAKDAKVAASTSAAPDKGRLGLAVRPLQPEEK 418 Query: 423 AQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVER 482 Q G GL+V D SGPAA AGIQ GDVIL++NGTPVSS +LR L AGK+VALLV+R Sbjct: 419 RQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRSLVDRAGKHVALLVQR 478 Query: 483 GDEKIFVPLAL 493 D KIFVPL L Sbjct: 479 DDAKIFVPLDL 489 >ref|NP_523111.1| protease signal peptide protein [Ralstonia solanacearum GMI1000] emb|CAD18703.1| probable protease signal peptide protein [Ralstonia solanacearum GMI1000] Length = 490 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 299/436 (68%), Positives = 350/436 (80%), Gaps = 1/436 (0%) Query: 59 VAAATDFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQ 117 VA DFS IV+RYGPAVVNIS T +A++ + G+ P+DPF+EFF+RF PQ Q Sbjct: 54 VAVPMDFSAIVERYGPAVVNISTTARAQRTSIQGLPPGVSPDDPFAEFFRRFMPQAPQQQ 113 Query: 118 QPRIMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIR 177 +++ GLGSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+R Sbjct: 114 GDQVVKGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVLR 173 Query: 178 IDAKNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTD 237 I A NLPTVQIG P+ KVG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTD Sbjct: 174 IAASNLPTVQIGSPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTD 233 Query: 238 VAVNPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTR 297 VAVNPGNSGGPLF+ G+VIGINSQIYSQTGG+QGLSF++PIDVAMKVEQQLV GKVTR Sbjct: 234 VAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMKVEQQLVATGKVTR 293 Query: 298 GRLGVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSV 357 GRLG+SVQ+++Q+L+DSF L K EGALV++VEK PA KAGLQ GDVI+ I HS Sbjct: 294 GRLGISVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDVHIGHSG 353 Query: 358 DLPTLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPL 417 DLP VA+ PGST P++++R GK ++VTVGE K AK A S + D+GRLGLAVRPL Sbjct: 354 DLPEQVAEIKPGSTVPLQIIRHGKPTALSVTVGEAKDAKVAANTSAAPDKGRLGLAVRPL 413 Query: 418 DKDEQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVA 477 +E+ Q G GL+V D SGPAA AGIQ GDVIL++NGTPVSS +LR L AGK+VA Sbjct: 414 QAEEKRQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRALVDRAGKHVA 473 Query: 478 LLVERGDEKIFVPLAL 493 LLV+R D KIFVPL L Sbjct: 474 LLVQRDDAKIFVPLDL 489 >emb|CCA87166.1| periplasmic protease; contains two PDZ domain [Ralstonia syzygii R24] Length = 490 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 296/431 (68%), Positives = 350/431 (81%), Gaps = 1/431 (0%) Query: 64 DFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQPRIM 122 DFSGIV+RYGPAVVNIS T A++ + G++P+DPF+EFFK F PQ+ Q +++ Sbjct: 59 DFSGIVERYGPAVVNISTTAHAQRTSIQGLPPGMNPDDPFAEFFKHFMPQVPQQQGDQVV 118 Query: 123 HGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAKN 182 GLGSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI A+N Sbjct: 119 KGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVLRIAARN 178 Query: 183 LPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVNP 242 LPTVQIG+P+ KVG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAVNP Sbjct: 179 LPTVQIGNPAGTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNP 238 Query: 243 GNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLGV 302 GNSGGPLF G+VIGINSQIYSQTGG+QGLSF++PIDVAM+VEQQLV GKVTRGRLG+ Sbjct: 239 GNSGGPLFSQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMRVEQQLVATGKVTRGRLGI 298 Query: 303 SVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPTL 362 SVQ+++Q+L+DSF L K EGALV++VEK PA KAGLQ GDVI+ I HS DLP Sbjct: 299 SVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDAHIGHSGDLPEQ 358 Query: 363 VADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDEQ 422 VA+ PG+ P++++R GK T++VTVGE K AK A S + D+GRLGLAVRPL +E+ Sbjct: 359 VAEIKPGTNVPLQIIRHGKPTTLSVTVGEAKDAKVAASTSAAPDKGRLGLAVRPLQPEEK 418 Query: 423 AQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVER 482 Q G GL+V D SGPAA AGIQ GDVIL++NGTPVSS +LR L AGK+VALLV+R Sbjct: 419 RQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRSLVDRAGKHVALLVQR 478 Query: 483 GDEKIFVPLAL 493 D KIFVPL L Sbjct: 479 DDAKIFVPLDL 489 >ref|ZP_07674118.1| serine protease [Ralstonia sp. 5_7_47FAA] gb|EFP67549.1| serine protease [Ralstonia sp. 5_7_47FAA] Length = 493 Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust. Identities = 301/433 (69%), Positives = 350/433 (80%), Gaps = 5/433 (1%) Query: 64 DFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQ--PR 120 DFSGIV RYGPAVVNIS T A++ + G+ P+DPFSEFFKRF PQ MPQQ + Sbjct: 62 DFSGIVDRYGPAVVNISTTAHAQRTSMQGLPPGMSPDDPFSEFFKRFMPQ--MPQQRGDQ 119 Query: 121 IMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDA 180 I+ GLGSGFI+S DGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI A Sbjct: 120 IVRGLGSGFIVSSDGLILTNAHVVDGAQEVNVKLTDRREFKAKVLGVDKQSDVAVLRISA 179 Query: 181 KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAV 240 KNLP VQIG P+ KVG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAV Sbjct: 180 KNLPVVQIGSPANTKVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAV 239 Query: 241 NPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRL 300 NPGNSGGPLF+ G+VIGINSQIYSQTGG+QGLSF++PIDVAMKVEQQLV+ GKVTRGRL Sbjct: 240 NPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMKVEQQLVSTGKVTRGRL 299 Query: 301 GVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLP 360 G++VQ+++Q+L+DSF L K EGALV+SVE G PA KAGLQ GDVI+ ID S DLP Sbjct: 300 GIAVQEVDQSLADSFKLPKPEGALVNSVEDGGPAAKAGLQPGDVILQIGDARIDRSGDLP 359 Query: 361 TLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKD 420 VAD PGST P++++R GK T+ VTVG K+AK + + DQGRLGLAVRPL + Sbjct: 360 EQVADIKPGSTVPLQIIRQGKPTTLTVTVGAAKEAKVASNEKAAPDQGRLGLAVRPLQPE 419 Query: 421 EQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLV 480 E+ Q G GL+V DV+GP+A GIQ GDVIL++NGTPVSSV +LR L AGK+VALLV Sbjct: 420 EKRQNGLPGGLVVMDVTGPSAKVGIQPGDVILSLNGTPVSSVQELRTLVDRAGKHVALLV 479 Query: 481 ERGDEKIFVPLAL 493 +R D KIFVP+ L Sbjct: 480 QRDDTKIFVPVDL 492 >ref|YP_001796606.1| periplasmic protease [Cupriavidus taiwanensis LMG 19424] emb|CAP63369.1| PERIPLASMIC PROTEASE; contains two PDZ domain [Cupriavidus taiwanensis LMG 19424] Length = 511 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 304/493 (61%), Positives = 367/493 (74%), Gaps = 11/493 (2%) Query: 4 RIVFVRNTLAVMIAAVVGGSYVYF-RGADLPSAHAAAVNAPLVASNSAPAAPAGPVVAAA 62 R R + + A +GG Y Y R P A A +A A P Sbjct: 26 RQTIARTAVGIAALAALGGGYAYLQREVITPGYAAPAPVVAAAQPAAAVARP-------- 77 Query: 63 TDFSGIVQRYGPAVVNISVTGKARKVADDDDNGLDPNDPFSEFFKRFGPQLQMPQ--QPR 120 DFSGIV +YGPAVVNISVT +A++ A G+DP+DP +FFKRFGPQ Q PQ + Sbjct: 78 MDFSGIVAQYGPAVVNISVTARAQRTAVQMPPGIDPDDPLFQFFKRFGPQFQGPQGGAQQ 137 Query: 121 IMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDA 180 ++ G GSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG D Q+D+AVIRIDA Sbjct: 138 LVRGQGSGFIVSPDGLILTNAHVVDGAQEVTVKLTDRREFKAKVLGTDPQTDVAVIRIDA 197 Query: 181 KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAV 240 ++LPTV++GDPS+V+VG+PVLAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAV Sbjct: 198 RDLPTVRLGDPSQVRVGEPVLAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAV 257 Query: 241 NPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRL 300 NPGNSGGPLF+ G+V+GINSQIYSQTGG+QGLSF+IPIDVA KV+QQLV HGKVTRGRL Sbjct: 258 NPGNSGGPLFNQRGEVVGINSQIYSQTGGYQGLSFAIPIDVATKVQQQLVAHGKVTRGRL 317 Query: 301 GVSVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLP 360 G+SVQ++NQAL+ SFGL K GALV+SVE SPA +AGL+ GDVI+ N IDHS DLP Sbjct: 318 GISVQEVNQALAQSFGLPKPTGALVNSVEPDSPAARAGLKPGDVIVQLNNDVIDHSGDLP 377 Query: 361 TLVADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKD 420 VAD PG+ ++++R G+ T++VTVG + KA + GRLGLAVRPL Sbjct: 378 EHVADIKPGTQSSLKIIRKGQPMTLSVTVGSARDQAVAQKAGGKEANGRLGLAVRPLSPA 437 Query: 421 EQAQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLV 480 E+ + G + GL+VEDV+GPAA GIQ GDVIL++NGTP++SV QLR L +GK VALLV Sbjct: 438 EKRESGIEGGLVVEDVTGPAARVGIQPGDVILSLNGTPIASVDQLRTLVGKSGKQVALLV 497 Query: 481 ERGDEKIFVPLAL 493 +R D +IF+PL L Sbjct: 498 QRDDARIFIPLDL 510 >emb|CCA82848.1| periplasmic protease; contains two PDZ domain [blood disease bacterium R229] Length = 490 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 294/431 (68%), Positives = 349/431 (80%), Gaps = 1/431 (0%) Query: 64 DFSGIVQRYGPAVVNISVTGKARKVADDD-DNGLDPNDPFSEFFKRFGPQLQMPQQPRIM 122 DFSGIV+RYGPAVVNIS T A++ + G++P+DPF+EFFK F PQ+ Q +++ Sbjct: 59 DFSGIVERYGPAVVNISTTAHAQRTSIQGLPPGMNPDDPFAEFFKHFMPQMPQQQGDQVV 118 Query: 123 HGLGSGFIISPDGLILTNAHVVDGAQEVVVKLTDRREFKAKVLGIDKQSDIAVIRIDAKN 182 GLGSGFI+SPDGLILTNAHVVDGAQEV VKLTDRREFKAKVLG+DKQSD+AV+RI A+N Sbjct: 119 KGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLTDRREFKAKVLGVDKQSDVAVLRIAARN 178 Query: 183 LPTVQIGDPSRVKVGQPVLAIGSPYGFDNTATAGIISAKSRSLPDDNYVPFIQTDVAVNP 242 LPTVQIG+P+ KVG+P LAIGSPYGF+NT TAGI+SAKSRSLPDD YVPFIQTDVAVNP Sbjct: 179 LPTVQIGNPAGTKVGEPALAIGSPYGFENTVTAGIVSAKSRSLPDDTYVPFIQTDVAVNP 238 Query: 243 GNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSFSIPIDVAMKVEQQLVTHGKVTRGRLGV 302 GNSGGPLF+ G+VIGINSQIYSQTGG+QGLSF++PIDVAM+VEQQLV GKVTRGRLG+ Sbjct: 239 GNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAVPIDVAMRVEQQLVATGKVTRGRLGI 298 Query: 303 SVQDLNQALSDSFGLKKAEGALVSSVEKGSPADKAGLQAGDVIISFNGHAIDHSVDLPTL 362 SVQ+++Q+L+DSF L K EGALV++VEK PA KAGLQ GDVI+ I HS DLP Sbjct: 299 SVQEVDQSLADSFNLPKPEGALVNAVEKDGPAAKAGLQPGDVILQIGDAHIGHSGDLPEQ 358 Query: 363 VADTPPGSTKPMEVMRAGKVRTINVTVGEMKQAKNDAKASKSDDQGRLGLAVRPLDKDEQ 422 VA+ G+ P++++R GK T++VTVGE K AK A S + D+GRLGLAVRPL +E+ Sbjct: 359 VAEIKSGTNVPLQIIRHGKPTTLSVTVGEAKDAKVAASTSAAPDKGRLGLAVRPLQPEEK 418 Query: 423 AQLGGQKGLLVEDVSGPAAVAGIQSGDVILAVNGTPVSSVAQLRKLATDAGKNVALLVER 482 Q G GL+V D SGPAA AGIQ GDVIL++NGTPVSS +LR L AGK+VALLV+R Sbjct: 419 RQSGLPGGLVVMDSSGPAAKAGIQPGDVILSLNGTPVSSAQELRSLVDRAGKHVALLVQR 478 Query: 483 GDEKIFVPLAL 493 D KIFVPL L Sbjct: 479 DDAKIFVPLDL 489