BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0055.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777747.1| signal peptide protein [Herbaspirillum serop... 508 e-142 ref|YP_004349679.1| signal peptide protein [Burkholderia gladiol... 325 3e-87 ref|YP_004474426.1| hypothetical protein Psefu_2365 [Pseudomonas... 323 2e-86 ref|YP_001185734.1| hypothetical protein Pmen_0228 [Pseudomonas ... 322 5e-86 ref|YP_004378058.1| hypothetical protein MDS_0275 [Pseudomonas m... 320 2e-85 gb|EFV86439.1| serine peptidase, family S33 [Achromobacter xylos... 316 2e-84 gb|EGP48456.1| hypothetical protein AXXA_00715 [Achromobacter xy... 315 6e-84 gb|ADR60790.1| Hypothetical protein, conserved [Pseudomonas puti... 311 4e-83 ref|YP_004153060.1| hypothetical protein Varpa_0731 [Variovorax ... 311 5e-83 ref|YP_004354798.1| hypothetical protein PSEBR_a3464 [Pseudomona... 310 9e-83 >ref|YP_003777747.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ65839.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/261 (99%), Positives = 260/261 (99%) Query: 1 MQASSRLFNLKTTLGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQ 60 MQASSRLFNLKT LGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQ Sbjct: 1 MQASSRLFNLKTALGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQ 60 Query: 61 AKGVKVTAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVY 120 AKGVKVTAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVY Sbjct: 61 AKGVKVTAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVY 120 Query: 121 VAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMA 180 VAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMA Sbjct: 121 VAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMA 180 Query: 181 ATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERSFAKQINAKTTELPASHV 240 ATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALER+FAKQINAKTTELPASHV Sbjct: 181 ATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERAFAKQINAKTTELPASHV 240 Query: 241 PQQSRPADVAKVILEAVAASK 261 PQQSRPADVAKVILEAVAASK Sbjct: 241 PQQSRPADVAKVILEAVAASK 261 >ref|YP_004349679.1| signal peptide protein [Burkholderia gladioli BSR3] gb|AEA64167.1| signal peptide protein [Burkholderia gladioli BSR3] Length = 257 Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 165/222 (74%), Positives = 183/222 (82%) Query: 38 SVVIVHGAFADGSDWAKVIPLLQAKGVKVTAVQNPLTSLADDVAAARRAIDNQPGKVVLV 97 SVVIVHGAFADGSDWAKV+PLLQ KG+ VT VQNPL SLA DVAAA RAID QPGKVVLV Sbjct: 34 SVVIVHGAFADGSDWAKVVPLLQDKGIHVTVVQNPLDSLAGDVAAATRAIDKQPGKVVLV 93 Query: 98 GHSWGGTVITEAGNHDKVASLVYVAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKAGFAS 157 GHSWGGTVITEAG +DKVASLVYVAAFAPDAGQ+ D+ KD P PGIA++ D G+ S Sbjct: 94 GHSWGGTVITEAGKNDKVASLVYVAAFAPDAGQSVADVSKDAPKSPGIARVEADSQGWLS 153 Query: 158 LPPAALAADFAQDVPAKQAAVMAATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQ 217 LP A+A DFAQDVPA++A VMAATQGPI AFG+ V TAAW +PS+YIVS DRMI Sbjct: 154 LPAQAVAEDFAQDVPAREARVMAATQGPIKGSAFGEAVSTAAWHDKPSYYIVSQHDRMIP 213 Query: 218 PALERSFAKQINAKTTELPASHVPQQSRPADVAKVILEAVAA 259 P+LERS AK I AK TELP SHVPQ+SRPADVA+VI +AVAA Sbjct: 214 PSLERSMAKAIGAKLTELPTSHVPQRSRPADVARVIEQAVAA 255 >ref|YP_004474426.1| hypothetical protein Psefu_2365 [Pseudomonas fulva 12-X] gb|AEF22332.1| hypothetical protein Psefu_2365 [Pseudomonas fulva 12-X] Length = 257 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 161/251 (64%), Positives = 196/251 (78%) Query: 7 LFNLKTTLGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVKV 66 + +K+ + A+A+A + S A Q SVVIVHGAFADGSDWAKV+PLLQA+GV V Sbjct: 1 MKTVKSQIAAIALAIGSTLTVGTSYAADTQPSVVIVHGAFADGSDWAKVVPLLQAEGVSV 60 Query: 67 TAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFAP 126 T VQNPLTSLADDVAA +R ++NQ GKVVLVGHSWGGTVITEAGN KV +LVYVAAFAP Sbjct: 61 TVVQNPLTSLADDVAATQRVLNNQDGKVVLVGHSWGGTVITEAGNDKKVGALVYVAAFAP 120 Query: 127 DAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGPI 186 AGQ +G+ GK P PPGIA+L D+ GF L P +A DFAQD+PA Q AVM ATQGPI Sbjct: 121 QAGQTSGEQGKGAPTPPGIAQLKSDRNGFLYLTPEGMAKDFAQDLPAAQTAVMTATQGPI 180 Query: 187 AMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSRP 246 AF DKV +AAWKT+PSWY+++T+DRMI P ++R+ AK+I A +E+ ASHVPQQS+P Sbjct: 181 KASAFEDKVTSAAWKTKPSWYLLATQDRMIHPDVQRAAAKRIGATLSEVNASHVPQQSQP 240 Query: 247 ADVAKVILEAV 257 A+VA+VIL+AV Sbjct: 241 AEVAEVILDAV 251 >ref|YP_001185734.1| hypothetical protein Pmen_0228 [Pseudomonas mendocina ymp] gb|ABP83002.1| hypothetical protein Pmen_0228 [Pseudomonas mendocina ymp] Length = 257 Score = 322 bits (824), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 164/255 (64%), Positives = 199/255 (78%), Gaps = 2/255 (0%) Query: 7 LFNLKTTLGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVKV 66 +F K L ALA+A+ F A A AA A+ SVVIVHGAFADGSDWAKV+PLLQ KG+KV Sbjct: 1 MFKAKPLLLALAIASPFFALS-AQAADAK-PSVVIVHGAFADGSDWAKVVPLLQDKGIKV 58 Query: 67 TAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFAP 126 T VQNPLTSLADDVAA +R ++NQ G VVLVGHSWGGTVI++AG DKV SLVYVAAFAP Sbjct: 59 TVVQNPLTSLADDVAATQRVLNNQDGNVVLVGHSWGGTVISQAGTDDKVRSLVYVAAFAP 118 Query: 127 DAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGPI 186 +AGQ+TG+L P PG ++++ DK GF L +AADFAQD+PAKQ A+M ATQGPI Sbjct: 119 NAGQSTGELYGGYPTAPGSSQIAADKNGFLYLTSQGMAADFAQDLPAKQTAIMTATQGPI 178 Query: 187 AMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSRP 246 AF D+ AAWK +PSWYIV++ DRMI P ++R FAK+I A+TTE+ ASHVPQQSRP Sbjct: 179 RAAAFDDRTSVAAWKQKPSWYIVASDDRMIVPQMQRDFAKKIGAQTTEIAASHVPQQSRP 238 Query: 247 ADVAKVILEAVAASK 261 +DVAKVI++AV ++ Sbjct: 239 SDVAKVIIQAVEKTQ 253 >ref|YP_004378058.1| hypothetical protein MDS_0275 [Pseudomonas mendocina NK-01] gb|AEB56306.1| hypothetical protein MDS_0275 [Pseudomonas mendocina NK-01] Length = 257 Score = 320 bits (819), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 162/255 (63%), Positives = 198/255 (77%), Gaps = 2/255 (0%) Query: 7 LFNLKTTLGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVKV 66 +FN K + ALA+A+ F A A AA A + SVVIVHGAFADGSDWAKV+PLLQ KG+KV Sbjct: 1 MFNTKPLILALAIASPFFAIN-AQAAEA-KPSVVIVHGAFADGSDWAKVVPLLQEKGIKV 58 Query: 67 TAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFAP 126 T VQNPLTSL DDVAA +R ++NQ G VVLVGHSWGGTVITEAG +KV SLVYVAAFAP Sbjct: 59 TVVQNPLTSLVDDVAATQRVLNNQEGDVVLVGHSWGGTVITEAGTDEKVRSLVYVAAFAP 118 Query: 127 DAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGPI 186 +AGQ++G+L PG ++++ DK GF L P +AADFAQD+PA Q AVM ATQGPI Sbjct: 119 NAGQSSGELYSGYRTAPGSSQIAADKNGFLYLTPQGMAADFAQDLPAAQTAVMTATQGPI 178 Query: 187 AMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSRP 246 AF ++ AAWK +PSWY+V++ DRMI P ++R FAK+I A+TTE+ ASHVPQQSRP Sbjct: 179 RAAAFDERTSVAAWKQKPSWYLVASDDRMIVPEMQRDFAKKIGAQTTEVAASHVPQQSRP 238 Query: 247 ADVAKVILEAVAASK 261 ADVAKVI++AV ++ Sbjct: 239 ADVAKVIIQAVEKTQ 253 >gb|EFV86439.1| serine peptidase, family S33 [Achromobacter xylosoxidans C54] Length = 257 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 168/237 (70%), Positives = 186/237 (78%), Gaps = 4/237 (1%) Query: 25 AAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVKVTAVQNPLTSLADDVAAAR 84 AA PA+A P SVVIVHGAFADGSDWAKV+ LLQAKGV+V AVQNPL SLA DVAAA Sbjct: 25 AAEPAAARP----SVVIVHGAFADGSDWAKVVALLQAKGVQVQAVQNPLESLAGDVAAAN 80 Query: 85 RAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFAPDAGQATGDLGKDLPVPPG 144 RAIDNQPGKVVLVGHSWGGTVITEAGNH KVASLVYVAAFAPDAGQ+ L + P G Sbjct: 81 RAIDNQPGKVVLVGHSWGGTVITEAGNHPKVASLVYVAAFAPDAGQSVATLTEGTPKAQG 140 Query: 145 IAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGPIAMKAFGDKVETAAWKTRP 204 + D G+ SL PA LA DFAQDVPA QA VMAATQGPI AFG+ V TAAWKT+P Sbjct: 141 SDSIGADSHGWLSLSPAGLARDFAQDVPAAQARVMAATQGPIKASAFGEAVSTAAWKTKP 200 Query: 205 SWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSRPADVAKVILEAVAASK 261 SW++VS DRMI PAL+ AK+I AK T+L ASHVPQQS+P VA+VIL+AVA+ K Sbjct: 201 SWFVVSNHDRMILPALQHQMAKRIGAKVTDLQASHVPQQSQPDAVARVILDAVASVK 257 >gb|EGP48456.1| hypothetical protein AXXA_00715 [Achromobacter xylosoxidans AXX-A] Length = 257 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 167/237 (70%), Positives = 184/237 (77%), Gaps = 4/237 (1%) Query: 25 AAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVKVTAVQNPLTSLADDVAAAR 84 AAGP SA P SVVIVHGAFADGSDWAKV+ LLQAKGV+V AVQNPL SLA DVAAA Sbjct: 25 AAGPDSARP----SVVIVHGAFADGSDWAKVVALLQAKGVQVQAVQNPLESLAGDVAAAN 80 Query: 85 RAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFAPDAGQATGDLGKDLPVPPG 144 RAIDNQPGKVVLVGHSWGGTVITEAGNH KVASLVYVAAFA DAGQ+ L + P PG Sbjct: 81 RAIDNQPGKVVLVGHSWGGTVITEAGNHPKVASLVYVAAFALDAGQSVATLTEGTPKAPG 140 Query: 145 IAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGPIAMKAFGDKVETAAWKTRP 204 + D G+ SL P LA DFAQDVPA QA VMAATQGPI AFG+ V TAAWKT+P Sbjct: 141 SDSIGADSHGWLSLSPQGLARDFAQDVPAAQAKVMAATQGPIKASAFGEPVTTAAWKTKP 200 Query: 205 SWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSRPADVAKVILEAVAASK 261 SW++VS DRMI PAL+ AK+I AK T+L SHVPQQS+P VA+VIL+AVA+ K Sbjct: 201 SWFVVSNHDRMILPALQHQMAKRIGAKVTDLQTSHVPQQSQPEAVARVILDAVASVK 257 >gb|ADR60790.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 257 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 150/222 (67%), Positives = 179/222 (80%) Query: 38 SVVIVHGAFADGSDWAKVIPLLQAKGVKVTAVQNPLTSLADDVAAARRAIDNQPGKVVLV 97 SVVIVHGAFADGSDWAKV+P LQA+GV VT VQNPLTSLADDVAA +R ++NQ G VVLV Sbjct: 32 SVVIVHGAFADGSDWAKVVPYLQAEGVVVTVVQNPLTSLADDVAATQRVLNNQSGNVVLV 91 Query: 98 GHSWGGTVITEAGNHDKVASLVYVAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKAGFAS 157 GHSWGGTVI+EAG H+KV++LVYVAAFAPDAGQ +G+ GK P PPGI+++ D GF Sbjct: 92 GHSWGGTVISEAGAHEKVSALVYVAAFAPDAGQFSGEQGKGAPTPPGISQIKADGNGFLY 151 Query: 158 LPPAALAADFAQDVPAKQAAVMAATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQ 217 L +A DFAQD+PA Q AVM ATQGPI AF D+ AAWKT+PSWY+++T DRMI Sbjct: 152 LTAEGMAKDFAQDLPAAQTAVMTATQGPIKASAFDDRTTVAAWKTKPSWYLLATDDRMIH 211 Query: 218 PALERSFAKQINAKTTELPASHVPQQSRPADVAKVILEAVAA 259 P ++RS AK+I A TEL ASHVPQQS+P +VAKVIL+AV++ Sbjct: 212 PDIQRSSAKRIGATLTELRASHVPQQSQPGEVAKVILKAVSS 253 >ref|YP_004153060.1| hypothetical protein Varpa_0731 [Variovorax paradoxus EPS] gb|ADU34949.1| hypothetical protein Varpa_0731 [Variovorax paradoxus EPS] Length = 254 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 154/228 (67%), Positives = 182/228 (79%) Query: 34 AEQASVVIVHGAFADGSDWAKVIPLLQAKGVKVTAVQNPLTSLADDVAAARRAIDNQPGK 93 A++ SVVIVHGAFADGSDWAKVIPLLQAKGV V AVQNPLTSL DDVAAA+RAID QPGK Sbjct: 27 ADKPSVVIVHGAFADGSDWAKVIPLLQAKGVNVVAVQNPLTSLDDDVAAAKRAIDAQPGK 86 Query: 94 VVLVGHSWGGTVITEAGNHDKVASLVYVAAFAPDAGQATGDLGKDLPVPPGIAKLSVDKA 153 VVLVGHSWGG+VITEAG +DKV+SLVY+AAFAPDAGQ + +LGKD P PG A + D + Sbjct: 87 VVLVGHSWGGSVITEAGANDKVSSLVYIAAFAPDAGQTSAELGKDYPAAPGFAHIKADAS 146 Query: 154 GFASLPPAALAADFAQDVPAKQAAVMAATQGPIAMKAFGDKVETAAWKTRPSWYIVSTKD 213 GF SL ++ FAQD+PA +VM ATQGPI K+F K+ AAWKT+PSW++V+ D Sbjct: 147 GFLSLTKEGMSKHFAQDLPAAATSVMTATQGPIQGKSFEQKLTVAAWKTKPSWFLVANSD 206 Query: 214 RMIQPALERSFAKQINAKTTELPASHVPQQSRPADVAKVILEAVAASK 261 MIQPAL+R AK+I A T + +SHVPQQS+PA VA+VIL+AV SK Sbjct: 207 HMIQPALQRDMAKKIGATVTTVNSSHVPQQSQPAKVAQVILDAVNQSK 254 >ref|YP_004354798.1| hypothetical protein PSEBR_a3464 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69794.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 257 Score = 310 bits (795), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 158/252 (62%), Positives = 190/252 (75%), Gaps = 2/252 (0%) Query: 6 RLFNLKTTLGALAVAAAFSAAGPASAAPAEQASVVIVHGAFADGSDWAKVIPLLQAKGVK 65 + F K A A+A F A+ AS A SVVIVHGAFADGSDWAKV+PLLQA+GV Sbjct: 2 KTFKSKIATVAFALAGTFIAS--ASHAQDTTPSVVIVHGAFADGSDWAKVVPLLQAQGVA 59 Query: 66 VTAVQNPLTSLADDVAAARRAIDNQPGKVVLVGHSWGGTVITEAGNHDKVASLVYVAAFA 125 VT VQNPLTSLADDVAA RRA+ NQ GKV+LVGHSWGGTVITEAG+ KV++LVYVAAFA Sbjct: 60 VTVVQNPLTSLADDVAATRRALSNQQGKVILVGHSWGGTVITEAGSDPKVSALVYVAAFA 119 Query: 126 PDAGQATGDLGKDLPVPPGIAKLSVDKAGFASLPPAALAADFAQDVPAKQAAVMAATQGP 185 P+AGQ +G+ GK P PPGI+++ D GF L P +A DFAQD+PA Q AVM ATQGP Sbjct: 120 PEAGQTSGEQGKGAPTPPGISQIKADGNGFLYLTPEGMAKDFAQDLPAAQTAVMTATQGP 179 Query: 186 IAMKAFGDKVETAAWKTRPSWYIVSTKDRMIQPALERSFAKQINAKTTELPASHVPQQSR 245 I AF DK ++WK +PSWY+++T+DRMI P ++RS AK+I A E+ SHVPQQS+ Sbjct: 180 IKASAFEDKTTVSSWKAKPSWYLLATEDRMIHPDVQRSAAKRIGATLAEVHTSHVPQQSQ 239 Query: 246 PADVAKVILEAV 257 PA+VA VIL+AV Sbjct: 240 PAEVAAVILKAV 251