BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0020.p (101 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777714.1| ribonuclease P protein [Herbaspirillum serop... 196 8e-49 ref|ZP_08273135.1| Ribonuclease P protein component [Oxalobacter... 134 5e-30 ref|YP_001101693.1| putative RNase P, protein C5 component, proc... 129 2e-28 ref|YP_001355386.1| ribonuclease P protein component [Janthinoba... 128 4e-28 ref|ZP_04577633.1| ribonuclease P protein component [Oxalobacter... 113 1e-23 ref|ZP_04579792.1| ribonuclease P protein component [Oxalobacter... 111 3e-23 ref|YP_003747202.1| ribonuclease p protein component [Ralstonia ... 71 4e-11 ref|YP_004030553.1| ribonuclease P protein component [Burkholder... 71 6e-11 ref|ZP_00944185.1| Ribonuclease P protein component [Ralstonia s... 70 7e-11 ref|NP_518123.1| ribonuclease P protein component [Ralstonia sol... 70 1e-10 >ref|YP_003777714.1| ribonuclease P protein [Herbaspirillum seropedicae SmR1] gb|ADJ65806.1| ribonuclease P protein [Herbaspirillum seropedicae SmR1] Length = 137 Score = 196 bits (499), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR 60 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR Sbjct: 37 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR 96 Query: 61 LSRPVNARRDPARSAALKAMLHAELRQLFAFLPNAPAFARK 101 LSRPVNARRDPARSAALKAMLHAELRQLFAFLPNAPAFARK Sbjct: 97 LSRPVNARRDPARSAALKAMLHAELRQLFAFLPNAPAFARK 137 >ref|ZP_08273135.1| Ribonuclease P protein component [Oxalobacteraceae bacterium IMCC9480] gb|EGF33392.1| Ribonuclease P protein component [Oxalobacteraceae bacterium IMCC9480] Length = 134 Score = 134 bits (337), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/90 (74%), Positives = 74/90 (82%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR 60 V R+ HFVLY R N+LT ARLGVVAAKRLAPRAVTRNT+KR TRELFR AELP +DCIVR Sbjct: 37 VFRSAHFVLYTRVNALTHARLGVVAAKRLAPRAVTRNTVKRITRELFRIAELPPIDCIVR 96 Query: 61 LSRPVNARRDPARSAALKAMLHAELRQLFA 90 LS+PVN R+ PA + LK ML AEL QLFA Sbjct: 97 LSKPVNVRKGPATTTTLKGMLRAELLQLFA 126 >ref|YP_001101693.1| putative RNase P, protein C5 component, processes tRNA, 4.5S RNA (partial) [Herminiimonas arsenicoxydans] emb|CAL63572.1| putative ribonuclease P rnpA [Herminiimonas arsenicoxydans] Length = 136 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/90 (71%), Positives = 74/90 (82%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR 60 V+RT HFVLYAR+ L ARLGVVAAKRLAPRAVTRNTIKR TRELFRQ LP++DCIVR Sbjct: 30 VYRTAHFVLYARQTDLPHARLGVVAAKRLAPRAVTRNTIKRVTRELFRQTALPSIDCIVR 89 Query: 61 LSRPVNARRDPARSAALKAMLHAELRQLFA 90 LS+PVN ++ PA +A+LK L EL +LFA Sbjct: 90 LSQPVNTKKGPATTASLKVALREELTRLFA 119 >ref|YP_001355386.1| ribonuclease P protein component [Janthinobacterium sp. Marseille] gb|ABR89153.1| ribonuclease P protein component [Janthinobacterium sp. Marseille] Length = 136 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 64/92 (69%), Positives = 74/92 (80%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVR 60 V RT HFVLY R+ L ARLGVVAAKR APRAVTRNTIKR TRELFRQ LP++DCIVR Sbjct: 30 VQRTAHFVLYTRQTDLPHARLGVVAAKRFAPRAVTRNTIKRVTRELFRQTALPSIDCIVR 89 Query: 61 LSRPVNARRDPARSAALKAMLHAELRQLFAFL 92 LS+PVN+++ PA +A+LKA L EL +LFA L Sbjct: 90 LSQPVNSKKGPATTASLKAALREELTRLFASL 121 >ref|ZP_04577633.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS] gb|EEO28595.1| ribonuclease P protein component [Oxalobacter formigenes HOxBLS] Length = 123 Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/88 (60%), Positives = 65/88 (73%) Query: 3 RTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVRLS 62 RTEHFVLYAR N L ARLG+V AKR APRAVTRNT+KR RE+FR ++PA+DCI+R++ Sbjct: 28 RTEHFVLYARSNQLAHARLGIVVAKRFAPRAVTRNTVKRICREVFRCMQMPALDCIIRMT 87 Query: 63 RPVNARRDPARSAALKAMLHAELRQLFA 90 PVN RR PA LK +L E+ +L Sbjct: 88 SPVNTRRGPATGTCLKRVLREEVCRLMG 115 >ref|ZP_04579792.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13] gb|EEO30765.1| ribonuclease P protein component [Oxalobacter formigenes OXCC13] Length = 125 Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 55/88 (62%), Positives = 67/88 (76%) Query: 3 RTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELFRQAELPAVDCIVRLS 62 RT+HFV+YAR N L ARLG+V AKR A RAVTRNTIKR RE FR ++PA+DCI+RL+ Sbjct: 28 RTKHFVMYARPNQLESARLGIVVAKRFAHRAVTRNTIKRLCRETFRCIQIPAMDCIIRLT 87 Query: 63 RPVNARRDPARSAALKAMLHAELRQLFA 90 PVN R+DPA + +K +L AEL QL A Sbjct: 88 SPVNTRKDPATNRQVKRILRAELDQLIA 115 >ref|YP_003747202.1| ribonuclease p protein component [Ralstonia solanacearum CFBP2957] emb|CBJ44622.1| Ribonuclease P protein component [Ralstonia solanacearum CFBP2957] Length = 155 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/92 (48%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELF--RQAELPAVDCI 58 V R+ HFVLY R N QARLG+V K+ A RAV RN IKR RELF RQA L D + Sbjct: 39 VRRSRHFVLYVRANGYPQARLGIVIGKKFARRAVERNLIKRQCRELFRLRQATLGGRDVL 98 Query: 59 VRLSRPVNARRDPARSAALKAMLHAELRQLFA 90 +RL R D AA K + EL LF Sbjct: 99 IRLHAKF-PREDVPTVAAFKRLCREELSYLFG 129 >ref|YP_004030553.1| ribonuclease P protein component [Burkholderia rhizoxinica HKI 454] emb|CBW76409.1| Ribonuclease P protein component (EC 3.1.26.5) [Burkholderia rhizoxinica HKI 454] Length = 219 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/91 (49%), Positives = 55/91 (60%), Gaps = 4/91 (4%) Query: 3 RTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELF--RQAELPAVDCIVR 60 R+ HFVLY R ARLGVV K+ APRAVTRN +KR RE F R+ EL D ++R Sbjct: 74 RSAHFVLYGRPTGQA-ARLGVVVGKKQAPRAVTRNLVKRLVREAFRVRRLELTGWDVLIR 132 Query: 61 LSRPVNARRDP-ARSAALKAMLHAELRQLFA 90 LS ++ R P A SAAL ML A++ L Sbjct: 133 LSGKIDRARFPSAGSAALTQMLQAQIEGLVG 163 >ref|ZP_00944185.1| Ribonuclease P protein component [Ralstonia solanacearum UW551] ref|YP_002258306.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609] gb|EAP73252.1| Ribonuclease P protein component [Ralstonia solanacearum UW551] emb|CAQ60227.1| ribonuclease p protein component [Ralstonia solanacearum IPO1609] Length = 155 Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/92 (50%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELF--RQAELPAVDCI 58 V R+ HFVLY R N QARLG+V K+ A RAV RN IKR RELF RQA L D + Sbjct: 39 VRRSRHFVLYVRANGHPQARLGIVIGKKFARRAVERNLIKRQCRELFRLRQATLGGRDVL 98 Query: 59 VRLSRPVNARRDPARSAALKAMLHAELRQLFA 90 VRL R D AA K + EL LF Sbjct: 99 VRLHAKF-PREDVPTVAAFKRLCREELSYLFG 129 >ref|NP_518123.1| ribonuclease P protein component [Ralstonia solanacearum GMI1000] emb|CAD13530.1| probable ribonuclease p protein component [Ralstonia solanacearum GMI1000] Length = 131 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/91 (49%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Query: 1 VHRTEHFVLYARRNSLTQARLGVVAAKRLAPRAVTRNTIKRATRELF--RQAELPAVDCI 58 V R+ HFVLY R N QARLG+V K+ A RAV RN IKR RELF RQA L D + Sbjct: 15 VRRSRHFVLYVRANGHPQARLGIVIGKKFARRAVERNLIKRQCRELFRLRQAALGGRDVL 74 Query: 59 VRLSRPVNARRDPARSAALKAMLHAELRQLF 89 +RL R D AA K + EL LF Sbjct: 75 IRLQTKF-PREDVPTVAAFKRLCREELSYLF 104