BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0003.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777694.1| LysR family transcription regulator protein ... 607 e-172 ref|YP_004751957.1| LysR family transcriptional regulator [Colli... 387 e-106 ref|YP_003674793.1| LysR family transcriptional regulator [Methy... 306 2e-81 ref|ZP_01368402.1| hypothetical protein PaerPA_01005561 [Pseudom... 300 1e-79 ref|YP_001351479.1| putative transcriptional regulator [Pseudomo... 300 2e-79 gb|AAT51305.1| PA5382 [synthetic construct] 299 3e-79 ref|NP_254069.1| transcriptional regulator [Pseudomonas aerugino... 299 3e-79 ref|YP_793856.1| LysR family transcriptional regulator [Pseudomo... 298 6e-79 ref|ZP_07797481.1| putative transcriptional regulator [Pseudomon... 298 6e-79 ref|ZP_08178640.1| transcriptional regulator [Xanthomonas vesica... 298 1e-78 >ref|YP_003777694.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65786.1| LysR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 300 Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust. Identities = 299/300 (99%), Positives = 299/300 (99%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN Sbjct: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEAGSELHIGASTTIGSYMLPAMIAAYRKDHAGA 120 DSGRQLLPQARHMLDAAQTIERQFSDPEAGSELHIGASTTIGSYMLPAMIAAYRKDHAGA Sbjct: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEAGSELHIGASTTIGSYMLPAMIAAYRKDHAGA 120 Query: 121 RVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSGR 180 RVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSGR Sbjct: 121 RVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSGR 180 Query: 181 KITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGISC 240 KITLKRL EAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGISC Sbjct: 181 KITLKRLREAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGISC 240 Query: 241 LSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRAWAQRQQPG 300 LSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRAWAQRQQPG Sbjct: 241 LSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRAWAQRQQPG 300 >ref|YP_004751957.1| LysR family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61134.1| LysR family transcriptional regulator [Collimonas fungivorans Ter331] Length = 303 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 201/296 (67%), Positives = 243/296 (82%), Gaps = 2/296 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M++T+RQLQIFLA+AQSGSTTAAA+ +ALSQSAASAALNELE+LL +LFDRVGKRL+LN Sbjct: 8 MRLTIRQLQIFLAIAQSGSTTAAAEQIALSQSAASAALNELENLLDCRLFDRVGKRLILN 67 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDP--EAGSELHIGASTTIGSYMLPAMIAAYRKDHA 118 D+GR LLPQA ++DAA+TIE+QF P G L IG+STTIGSY+LPA+IAAYR+ H+ Sbjct: 68 DNGRLLLPQAGQVVDAAKTIEQQFLTPGMAQGGGLQIGSSTTIGSYLLPALIAAYRQQHS 127 Query: 119 GARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKS 178 +VR ++ANTADIV AVVNFEVD GLIEGP HA D++VEPWM+DEL+VVA+P+HPL Sbjct: 128 ELQVRVMIANTADIVAAVVNFEVDVGLIEGPSHAADLQVEPWMVDELLVVASPQHPLAGG 187 Query: 179 GRKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGI 238 RK+ L +L +AEWLLRE GSGTREAVE AL+P+LHHL S+EFGNSEAIK ATA GLGI Sbjct: 188 DRKVGLAQLRQAEWLLREPGSGTREAVEQALLPHLHHLRQSYEFGNSEAIKHATAAGLGI 247 Query: 239 SCLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRAWA 294 SCLS AVV D ++S +LVEL T LP L RHFY+V SRH+ S L L +CR+W+ Sbjct: 248 SCLSHAVVADFLQSGRLVELKTSLPRLHRHFYLVHSRHKILSLRLMQFLAYCRSWS 303 >ref|YP_003674793.1| LysR family transcriptional regulator [Methylotenera versatilis 301] gb|ADI30216.1| transcriptional regulator, LysR family [Methylotenera versatilis 301] Length = 304 Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 157/290 (54%), Positives = 210/290 (72%), Gaps = 8/290 (2%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M+ITLRQLQIF+A+AQSGSTTAA +++ALSQSA SA++ ELE L VQLFDRVGKRL+LN Sbjct: 2 MRITLRQLQIFIAIAQSGSTTAAGEIIALSQSAISASIAELEKALNVQLFDRVGKRLLLN 61 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEAGSELHIGASTTIGSYMLPAMIAAYRKDHAGA 120 D GR +LPQA +++ A ++E F++ A S L IGAS TIG+Y+LP ++A Y + Sbjct: 62 DHGRAMLPQAMALVNGATSLENSFNEI-APSILIIGASLTIGNYLLPTILANYWRAQGIV 120 Query: 121 R------VRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHP 174 ++ +VANTADIV VVNFEVD GLIEGPC+ D+ V PW+ DEL++V AP HP Sbjct: 121 LGELMPPLQVVVANTADIVSKVVNFEVDIGLIEGPCNRADISVSPWLEDELLLVVAPNHP 180 Query: 175 LVK-SGRKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATA 233 +++ +G I+ L +A WLLRE GSGTREA+E AL+P++ L SS EF + EAIK++ Sbjct: 181 VLQENGEFISPDLLTKANWLLRERGSGTREALEQALLPHIAQLKSSLEFNDHEAIKQSAV 240 Query: 234 EGLGISCLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSL 283 +GLGI+CLSR VV DM+++ KLVEL TP L R F ++V + +P + Sbjct: 241 QGLGIACLSRTVVRDMLDAGKLVELKTPFGKLVRRFSLLVHHQKQVTPGM 290 >ref|ZP_01368402.1| hypothetical protein PaerPA_01005561 [Pseudomonas aeruginosa PACS2] ref|YP_002443356.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58] ref|ZP_04931256.1| hypothetical protein PACG_04036 [Pseudomonas aeruginosa C3719] ref|ZP_04936256.1| hypothetical protein PA2G_03720 [Pseudomonas aeruginosa 2192] gb|EAZ55375.1| hypothetical protein PACG_04036 [Pseudomonas aeruginosa C3719] gb|EAZ60375.1| hypothetical protein PA2G_03720 [Pseudomonas aeruginosa 2192] emb|CAW30532.1| probable transcriptional regulator [Pseudomonas aeruginosa LESB58] gb|EGM15192.1| putative transcriptional regulator [Pseudomonas aeruginosa 138244] dbj|GAA20141.1| probable transcriptional regulator [Pseudomonas aeruginosa NCMG1179] gb|AEO77979.1| putative transcriptional regulator [Pseudomonas aeruginosa M18] Length = 297 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 158/293 (53%), Positives = 200/293 (68%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+ GSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL S Sbjct: 121 VRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLA-SR 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + S LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLASGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >ref|YP_001351479.1| putative transcriptional regulator [Pseudomonas aeruginosa PA7] gb|ABR82792.1| probable transcriptional regulator [Pseudomonas aeruginosa PA7] Length = 296 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 158/293 (53%), Positives = 200/293 (68%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+SGSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARSGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAASAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL Sbjct: 121 VRVDASIGNTGSAVHDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLAAR- 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + S LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLASGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >gb|AAT51305.1| PA5382 [synthetic construct] Length = 298 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 157/293 (53%), Positives = 200/293 (68%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+ GSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL S Sbjct: 121 VRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLA-SR 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + + LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLATGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >ref|NP_254069.1| transcriptional regulator [Pseudomonas aeruginosa PAO1] gb|AAG08767.1|AE004951_1 probable transcriptional regulator [Pseudomonas aeruginosa PAO1] Length = 297 Score = 299 bits (766), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 157/293 (53%), Positives = 200/293 (68%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+ GSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL S Sbjct: 121 VRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLA-SR 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + + LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLATGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >ref|YP_793856.1| LysR family transcriptional regulator [Pseudomonas aeruginosa UCBPP-PA14] gb|ABJ14765.1| putative transcriptional regulator, LysR family [Pseudomonas aeruginosa UCBPP-PA14] gb|EGM12363.1| LysR family transcriptional regulator [Pseudomonas aeruginosa 152504] Length = 297 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 157/293 (53%), Positives = 199/293 (67%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+ GSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL Sbjct: 121 VRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLALR- 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + S LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLASGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >ref|ZP_07797481.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016] gb|EFQ42577.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016] dbj|BAK92960.1| LysR family transcriptional regulator [Pseudomonas aeruginosa NCGM2.S1] Length = 297 Score = 298 bits (763), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 157/293 (53%), Positives = 199/293 (67%), Gaps = 2/293 (0%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M ++ RQLQIF AVA+ GSTTAAA+ ++LSQSA SAALNELE L +LFDRVGKRL LN Sbjct: 1 MALSFRQLQIFCAVARCGSTTAAAESISLSQSATSAALNELESQLSTRLFDRVGKRLQLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEA-GSELHIGASTTIGSYMLPAMIAAYRKDHAG 119 + GR+ LPQA +LD +E+QF+ A + L + AS+TIG+Y+LP ++A++ ++ G Sbjct: 61 EVGRRFLPQALRLLDGVAQLEQQFAVSAAPQASLTVAASSTIGNYVLPRLLASFEREQPG 120 Query: 120 ARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKSG 179 RV A + NT V VV F D GLIEGPCH + VEPW+ D LIVVAAP HPL Sbjct: 121 VRVNASIGNTGSAVQDVVTFAADIGLIEGPCHEPGLRVEPWLEDSLIVVAAPGHPLALR- 179 Query: 180 RKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGIS 239 +++ + L A WLLRE GSGTRE V HAL+ +LH+L S + G+SEAIK + A GLGIS Sbjct: 180 TQVSREALRRARWLLREPGSGTREEVSHALLGHLHYLEDSLDLGSSEAIKHSVAAGLGIS 239 Query: 240 CLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRA 292 CLSR VVE+ + S LVEL + LP LRR FYM+ R + SP CRA Sbjct: 240 CLSRWVVEEQLASGALVELRSSLPPLRRRFYMLRQRDKFLSPGFERFWEHCRA 292 >ref|ZP_08178640.1| transcriptional regulator [Xanthomonas vesicatoria ATCC 35937] gb|EGD09134.1| transcriptional regulator [Xanthomonas vesicatoria ATCC 35937] Length = 304 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 160/299 (53%), Positives = 198/299 (66%), Gaps = 3/299 (1%) Query: 1 MKITLRQLQIFLAVAQSGSTTAAADLVALSQSAASAALNELEHLLGVQLFDRVGKRLVLN 60 M++TLRQLQIF A+A GSTT+A VALSQSA SAALNELE L QLFDRVGKRLVLN Sbjct: 1 MRLTLRQLQIFCAIAHHGSTTSAGLAVALSQSATSAALNELEQALATQLFDRVGKRLVLN 60 Query: 61 DSGRQLLPQARHMLDAAQTIERQFSDPEAGS--ELHIGASTTIGSYMLPAMIAAYRKDHA 118 D G LLPQAR +LD AQ IE F S L IG STTIG+++LP ++ A RK Sbjct: 61 DVGMALLPQARKLLDGAQEIEAGFQPGAIASMARLKIGCSTTIGNHVLPLVLRALRKQAP 120 Query: 119 GARVRALVANTADIVDAVVNFEVDAGLIEGPCHADDVEVEPWMMDELIVVAAPRHPLVKS 178 RV AN++ I V NFE+D GLIEGPCH ++ EPW++DEL+VV RHPL K Sbjct: 121 ALRVDMESANSSAIARKVANFELDMGLIEGPCHLPELHAEPWLVDELLVVVGRRHPLAKQ 180 Query: 179 GRKITLKRLHEAEWLLREAGSGTREAVEHALIPYLHHLPSSFEFGNSEAIKRATAEGLGI 238 K+TL L +A+WLLRE GSGTRE VE L+ +LH L + + G+SEAIK +GLG+ Sbjct: 181 A-KVTLADLRDADWLLREPGSGTREEVEQLLLRHLHVLSDTRQIGSSEAIKNMVVQGLGV 239 Query: 239 SCLSRAVVEDMIESRKLVELDTPLPTLRRHFYMVVSRHRAPSPSLGALLGFCRAWAQRQ 297 SCLSR VVE +I ++KL L LP L R F+++ R + SP+L C+ + Q Q Sbjct: 240 SCLSRWVVEGLIATKKLTPLTGGLPRLTRRFFVITHREKFFSPTLKRFHAACQQFKQDQ 298