BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0085.p (862 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_309305.1| outer membrane usher protein [Escherichia coli ... 667 0.0 gb|EFX07263.1| putative outer membrane usher protein [Escherichi... 667 0.0 gb|EGX10205.1| fimbrial Usher family protein [Escherichia coli S... 667 0.0 ref|ZP_06656959.1| outer membrane usher protein [Escherichia col... 667 0.0 gb|EFX12225.1| putative outer membrane usher protein [Escherichi... 666 0.0 gb|EFX27205.1| putative outer membrane usher protein [Escherichi... 666 0.0 gb|EFX31563.1| putative outer membrane usher protein [Escherichi... 665 0.0 ref|NP_287040.1| usher protein [Escherichia coli O157:H7 str. ED... 665 0.0 ref|ZP_08353082.1| putative fimbrial usher protein [Escherichia ... 665 0.0 ref|YP_002440786.1| usher CupA3 [Pseudomonas aeruginosa LESB58] ... 664 0.0 >ref|NP_309305.1| outer membrane usher protein [Escherichia coli O157:H7 str. Sakai] ref|ZP_02785782.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC4501] ref|ZP_02813783.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC869] ref|ZP_02824170.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC508] ref|ZP_03444617.1| fimbrial usher protein [Escherichia coli O157:H7 str. TW14588] ref|ZP_05941396.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. FRIK2000] ref|ZP_05948302.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. FRIK966] ref|YP_003498847.1| outer membrane usher protein [Escherichia coli O55:H7 str. CB9615] dbj|BAB34701.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. Sakai] gb|EDU87258.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC4501] gb|EDU89867.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC869] gb|EDU96778.1| fimbrial usher protein [Escherichia coli O157:H7 str. EC508] gb|EEC27388.1| fimbrial usher protein [Escherichia coli O157:H7 str. TW14588] gb|ADD55863.1| Putative outer membrane usher protein [Escherichia coli O55:H7 str. CB9615] gb|EFW67105.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. EC1212] gb|EFX21873.1| putative outer membrane usher protein [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EGD62345.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. 1125] gb|EGD69322.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. 1044] Length = 840 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/847 (42%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >gb|EFX07263.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. G5101] Length = 840 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/847 (42%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQCLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG GITFGPYLG+TFALIEA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGITFGPYLGETFALIEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >gb|EGX10205.1| fimbrial Usher family protein [Escherichia coli STEC_MHI813] Length = 840 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/847 (41%), Positives = 526/847 (62%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGKEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAQELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQ+ RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQMISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGTVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSTLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 ++ ++ Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DNSNDM----QTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG G+TFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGVTFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G +S +E+++S++ V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDSDAELVDSEKQVAPVAGAAVKVVFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >ref|ZP_06656959.1| outer membrane usher protein [Escherichia coli B185] gb|EFF07341.1| outer membrane usher protein [Escherichia coli B185] Length = 840 Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/847 (42%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGKEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAQELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQ+ RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQMISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >gb|EFX12225.1| putative outer membrane usher protein [Escherichia coli O157:H- str. 493-89] gb|EFX17137.1| putative outer membrane usher protein [Escherichia coli O157:H- str. H 2687] Length = 840 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/847 (42%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWPHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQA---------- 653 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 +G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 654 --SGNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >gb|EFX27205.1| putative outer membrane usher protein [Escherichia coli O55:H7 str. USDA 5905] Length = 840 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/847 (42%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTIVGLNASKGQDYWQA---------- 653 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 +G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 654 --SGNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >gb|EFX31563.1| putative outer membrane usher protein [Escherichia coli O157:H7 str. LSU-61] Length = 840 Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/847 (42%), Positives = 523/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AG +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGVAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >ref|NP_287040.1| usher protein [Escherichia coli O157:H7 str. EDL933] gb|AAG55651.1|AE005303_7 putative usher protein [Escherichia coli O157:H7 str. EDL933] Length = 840 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/847 (42%), Positives = 523/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ +M +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNMTWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q G++N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 LTWQHGMTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG GITFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGITFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S+R V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSERQVAPVAGAAVKVIFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+ + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEXANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >ref|ZP_08353082.1| putative fimbrial usher protein [Escherichia coli M718] gb|EGI22399.1| putative fimbrial usher protein [Escherichia coli M718] Length = 840 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/847 (41%), Positives = 524/847 (61%), Gaps = 38/847 (4%) Query: 1 MAWPLTPAAAAQQEQYLFLEALELASPINKGSLARFNRPGTIEPGRYSVDVFLNGVFSHR 60 M ++PA + ++ Y F L S ++ SLA+ ++ PG Y +D++ N S Sbjct: 21 MGSEISPATPSDEDNYTFDPQLFRGSRFSQSSLAKLTTRESVAPGNYKMDIYTNNKLSGS 80 Query: 61 RSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ-LGQRE--CARIEELASGASAVFEIA 117 ++ F V C T + A + L+ G+ G+++ C +ELA G ++ +++ Sbjct: 81 WNVTFKEAADGRVLPCLTPEVADAIGLK---TGEDKGEKDPVCTFAKELAPGITSQTQLS 137 Query: 118 DLRLNVSVPQSQLKQVARGYVDPDLYDAGQSIGFVNYSISQYYSRVAQSSNSAT----YG 173 LRL++SVPQSQL RGYV P D G S+ F+NY I+ YY+ N+ + + Sbjct: 138 QLRLDLSVPQSQLISRPRGYVPPSELDTGASLAFMNY-IANYYNVAYSGQNAHSQRSLWA 196 Query: 174 FTNSGVNLGLWRLRQQGSMRYDSQAGLAWNPVRTYAKRALPAWRSELTVGENFTTGKLLS 233 N G+NLG W+ RQ ++ +D+ G WN +R+Y +R LPA S+L +G+ T+G+ S Sbjct: 197 SFNGGINLGAWQYRQLSNITWDNDKGNQWNNIRSYLQRPLPAINSQLMMGQLITSGRFFS 256 Query: 234 GLAYQGVEISSDDRMLPDSLRGYAPVIRGTARSNALVIVSQKAREIYRTTVAPGSFVIDD 293 GL+Y GV +++D+RMLPDS+RGYAP IRG A +NA V V Q EIY+TTVAPG F I+D Sbjct: 257 GLSYHGVSLATDERMLPDSMRGYAPTIRGVAATNARVSVMQNGHEIYQTTVAPGPFEIND 316 Query: 294 LYPTSYNGDLDVTVIEADGSRAQLSVPFSALPESMRPGSSRYSLTLGRTRDTETAALFLD 353 LYPTSY+GDLDVTV EA+G+ ++ SVPFSA+PESMRPG+SRY++ +G+T+D+ ++F D Sbjct: 317 LYPTSYSGDLDVTVTEANGAVSRFSVPFSAVPESMRPGTSRYNVEVGKTQDSGDDSMFGD 376 Query: 354 TLYQRGLSNALTGNVGLRLASGYQSAVLGSTLAGRLGSLGLNLSYSHADTGHGNS-GGWM 412 +Q GL+N LT N G R+A GYQ+ +LG LG+ G NL++SHA + GWM Sbjct: 377 FTWQHGLTNTLTFNSGSRIADGYQALMLGGVYGSSLGAFGANLTWSHARVPESEAQSGWM 436 Query: 413 LGMAYSRSFEDTGTQFSIASYRYSTAGYRELVDVLSERQSNRAATAWLASSSSYQQQSRF 472 + +S++F+ T T S+A YRYST+GYR+L DVL ER + +W SS ++QQSRF Sbjct: 437 SQLTWSKTFQPTSTTVSLAGYRYSTSGYRDLADVLGERHAASNKQSW--DSSQWRQQSRF 494 Query: 473 DMSVSQQLGSAGSLYLSGLTQTFYHNRSRITQMQFGYSTMWSNGMSMNLAFQRQQISASS 532 D+++SQ L + G+L++SG TQ + +SR TQ+Q GYS +S+G+SMNL+ RQ++ Sbjct: 495 DLTLSQSLANYGNLFVSGSTQNYRGGKSRDTQLQLGYSNSFSHGISMNLSVGRQRMGGYK 554 Query: 533 SSALELADGRQPSTSRPGSSVMLSLSIPLGKAGTERPVMSTSLVR-TAAQDVLQSQVSGM 591 + +D Q TS LS S PLG G P +S S T LQS ++GM Sbjct: 555 DN----SDDMQTVTS-------LSFSFPLGGNGPRVPSLSNSWTHSTDGSSQLQSSLTGM 603 Query: 592 LPGPHRLSYSVGANHASGGRQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAG 651 L +YS+ +Q +L+GN+ R S+ + N ++G+DYWQA+ Sbjct: 604 LDEAQTTNYSLNVMRDQQYKQTTLSGNMQKRFSQTTVGLNASKGQDYWQAS--------- 654 Query: 652 GITGIARGALAVHGDGITFGPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLS 711 G +GA+AVHG G+TFGPYLG+TFAL+EA GA+GA+++N I+ +G+AL+P+++ Sbjct: 655 ---GNVQGAMAVHGGGVTFGPYLGETFALVEAKGAEGAKVYNSSQLEINDSGYALVPAVT 711 Query: 712 AYQRNVVELASAGSNSKSEILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLP 771 Y+ N + L G + +E+++S++ V P AGA +K+ FRTR G ALLI+ +G LP Sbjct: 712 PYRYNRISLDPQGMDGDAELVDSEKQVAPVAGAAVKVVFRTRPGKALLIKSRMADGSELP 771 Query: 772 MGADVLTEEGEVVGMVGQGSQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQAL 831 MGADVL E VVG+ GQG Q YLR++ T+ L VRWG+G + C +D+ G+D + Sbjct: 772 MGADVLDENNTVVGIAGQGGQIYLRTEQTKGHLSVRWGEGANDSCQLPFDISGKDSNSPI 831 Query: 832 LRLEAAC 838 +RL C Sbjct: 832 IRLNETC 838 >ref|YP_002440786.1| usher CupA3 [Pseudomonas aeruginosa LESB58] emb|CAW27924.1| usher CupA3 [Pseudomonas aeruginosa LESB58] Length = 872 Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/831 (46%), Positives = 509/831 (61%), Gaps = 45/831 (5%) Query: 35 RFNRPGTIEPGRYSVDVFLNGVFSHRRSLRFDLFEGQGVAACFTAQDAALLNLRPELLGQ 94 RFN+ G I+PGRY VDV+LN F+ R + F G +D LR L + Sbjct: 53 RFNQDGRIDPGRYHVDVYLNERFASRSEVSFRANPASGAVEPCLDEDF----LRQRLGAK 108 Query: 95 LGQ--------RECARIEELASGASAVFEIADLRLNVSVPQSQLKQVARGYVDPDLYDAG 146 G R CA ++ G+ ++A LRL++SVPQ+ L RGYV P+ +DAG Sbjct: 109 PGDDPRKSGDGRHCAFLDARLPGSRFSLDVARLRLDLSVPQALLDLKPRGYVSPEEWDAG 168 Query: 147 QSIGFVNYSISQYYSRV-AQSSNSATYGFT--NSGVNLGLWRLRQQGSM---RYDSQAGL 200 S+GFVNY + Y S S + Y + NSG+NLGLWRLR Q + RY+ QA Sbjct: 169 DSMGFVNYDTNLYRSEYRGGESGRSDYAYVGLNSGINLGLWRLRHQSNYTYSRYNGQARR 228 Query: 201 AWNPVRTYAKRALPAWRSELTVGENFTTGKLLSGLAYQGVEISSDDRMLPDSLRGYAPVI 260 WN +RTYA+RALPAWRSELT GE++T G LL + Y+G+ +++DDRMLP+SLR YAP + Sbjct: 229 KWNSIRTYAQRALPAWRSELTAGESYTAGNLLGSIGYRGLSLATDDRMLPESLRRYAPQV 288 Query: 261 RGTARSNALVIVSQKAREIYRTTVAPGSFVIDDLYPTSYNGDLDVTVIEADGSRAQLSVP 320 RGTA + A V++SQ R+I VAPG FVIDDLY ++Y GDLDV V EADGS + SVP Sbjct: 289 RGTAATAARVVISQNGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVP 348 Query: 321 FSALPESMRPGSSRYSLTLGRTRDT-ETAALFLDTLYQRGLSNALTGNVGLRLASGYQSA 379 F+++PESMRPG SRYS TLG+ R + LF D YQRG+SNALT N+GLR+A Y + Sbjct: 349 FASVPESMRPGLSRYSFTLGQARQYGDGDDLFADFTYQRGMSNALTANLGLRVADDYLAM 408 Query: 380 VLGSTLAGRLGSLGLNLSYSHADTGHG-NSGGWMLGMAYSRSFEDTGTQFSIASYRYSTA 438 + G LA R G+ GLN +YS A G GW +G+ YSR+F+ TGT ++A YRYST Sbjct: 409 LGGGVLATRFGAFGLNSTYSSARVEDGARKQGWRIGLDYSRTFQPTGTTLTLAGYRYSTE 468 Query: 439 GYRELVDVLSERQSNRAATAWLASSSSYQQQSRFDMSVSQQLGSAGSLYLSGLTQTFYHN 498 GYREL DVL R + R W S SY+Q+++F++ VSQ LG G+LYLSG + FY Sbjct: 469 GYRELGDVLGSRDALRHGDTW--DSGSYKQRNQFNLLVSQALGGYGNLYLSGSSSDFYDG 526 Query: 499 RSRITQMQFGYSTMWSNGMSMNLAFQRQ-----QISASSSSALELADGRQPSTSRPGSSV 553 +SR TQ+QFGYS W +S NLA+ RQ Q +EL R + + ++ Sbjct: 527 KSRDTQLQFGYSNTWGQ-LSYNLAWSRQTTTYYQEQGDQDPGVELLR-RDRRSGQRNDTL 584 Query: 554 MLSLSIPLGKAGTERPVMSTSLVRTAAQD---VLQSQVSGMLPGPHRLSYSVGANHASGG 610 LS+S+PLG + + P +S R + LQ+ ++G L SY++ AN S Sbjct: 585 TLSVSMPLGSS-SRAPTLSAMATRRSGDSRGGSLQTGLNGTLGDERTWSYALSANRDSEV 643 Query: 611 RQDSLNGNLGARLSKADLNFNLARGRDYWQAAASTSTWRAGGITGIARGALAVHGDGITF 670 + NG L + + A +N A+G Y Q + GGI RGAL H DG+T Sbjct: 644 ADTTWNGTLQKQAALATVNAGYAQGDRYRQYS--------GGI----RGALVAHRDGLTL 691 Query: 671 GPYLGDTFALIEAPGAKGARIFNGQGAVIDGNGFALLPSLSAYQRNVVELASAGSNSKSE 730 GP +GDTFAL+EA GA GA I GQGA IDGNG+AL PSLS Y+ N + L G + +E Sbjct: 692 GPSVGDTFALVEAKGASGAAIRGGQGARIDGNGYALAPSLSPYRYNPISLDPVGIDPDAE 751 Query: 731 ILESQRIVIPYAGATLKLRFRTRAGHALLIRLLRDEGEPLPMGADVLTEEGEVVGMVGQG 790 +LE++R V PYAGA++++ FRT GH LLI+ R++G LP+GA V+ + G +GMVGQG Sbjct: 752 LLETERKVAPYAGASVRVTFRTLTGHPLLIQARREDGSVLPLGAVVVDDGGAAIGMVGQG 811 Query: 791 SQAYLRSDSTRARLLVRWGDGQQERCTFQYDLQGQDLEQALLRLEAACVAA 841 Q Y R+++ R RLLV+WG ++ERC YDL G +QAL+RL C AA Sbjct: 812 GQVYARAENQRGRLLVQWGTARKERCELPYDLAGVSRDQALIRLRGTCRAA 862