BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0080.p (560 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06729455.1| capsular synthesis regulatory two-component s... 417 e-114 ref|YP_003375798.1| two-component system sensor-response regulat... 401 e-109 emb|CCA87260.1| putative capsular synthesis two-component sensor... 400 e-109 emb|CCA83593.1| putative capsular synthesis two-component sensor... 397 e-108 ref|YP_003750644.1| capsular synthesis two-component sensor kina... 395 e-107 ref|NP_523181.1| capsular synthesis two-component sensor kinase ... 387 e-105 ref|ZP_04947579.1| Signal transduction histidine kinase [Burkhol... 374 e-101 emb|CAQ18308.1| probable sensor histidine kinase transmembrane (... 373 e-101 ref|YP_373634.1| multi-sensor hybrid histidine kinase [Burkholde... 287 3e-75 ref|ZP_02888099.1| histidine kinase [Burkholderia ambifaria IOP4... 279 8e-73 >ref|ZP_06729455.1| capsular synthesis regulatory two-component sensor kinase and response regulator hybrid transcription regulator protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gb|EFF49425.1| capsular synthesis regulatory two-component sensor kinase and response regulator hybrid transcription regulator protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 1092 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 225/483 (46%), Positives = 309/483 (63%), Gaps = 7/483 (1%) Query: 18 GSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDRCVIG 77 G+FF+ Q I GPDW+ VY ++ DVL L+ +F TGA L AL +WA +YFD V Sbjct: 316 GTFFVVQRISGPDWISVYAYSWGDVLGNLQHEFVTGALVCLLALGLMWATVIYFDLRVTK 375 Query: 78 PLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQSALTSSGFYS 137 PL A ++E+ FS+ IIDTLPVGI +YA + VL N VA +ML S+ FY Sbjct: 376 PLLNSAEKLIEAEHFSEAIIDTLPVGIGIYAPETDSVVLENGVAKRMLGHGH-DSADFYR 434 Query: 138 QIIKAVRLGDDL---QQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDLNMQK 194 +I+ R + + + IE + + EG S++G S+TRF G+ V+LLG++D+N K Sbjct: 435 HVIRE-RTAEAVPGTHHSFIEVQWDIAEGQSSYIGVASSQTRFGGRPVILLGLVDINEHK 493 Query: 195 AHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQRIEL 254 A+E L+ +AK AD AN+AKS+FLA VSHEIRTPLHGA+GH+ELLAR L Q + +++ Sbjct: 494 ANEMLLIQAKQTADEANRAKSIFLAIVSHEIRTPLHGAMGHLELLARSPLGFEQAEWVDM 553 Query: 255 IRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLAFQCL 314 IR +FD L+ LVND+LD TK+E+ ++K++ + N++ E CA+ F L +AF C+ Sbjct: 554 IRRSFDALLSLVNDLLDSTKLEANALKINPMPMSPNEVAERCARSFGASILQNDVAFYCM 613 Query: 315 PSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEVSDTG 374 L+ + GD +RL QILQNL+GNAVKFT +G I +S+R L+++G + RFEV+DTG Sbjct: 614 TDPDLDGVVEGDDQRLAQILQNLLGNAVKFTERGSIMISSRCLKQQGDTIWARFEVADTG 673 Query: 375 IGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRGSVFG 434 IG+ S + IFK L QADDSISRRFGGTGLGL LCR L+ LMGG I++ SE G+GSVF Sbjct: 674 IGIPASMQSAIFKPLAQADDSISRRFGGTGLGLFLCRNLSRLMGGRISVSSEPGKGSVFR 733 Query: 435 AEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGAE-RCDPAMPHPHA 493 ++ A P+P L G SV L C+ +ML + L+ WGA A P P Sbjct: 734 VDLPFKRNARPLPADPRP-LEGLSVDLVCQQPLWRSMLAERLSRWGATLYVAAAQPAPLH 792 Query: 494 IHL 496 I + Sbjct: 793 IRM 795 >ref|YP_003375798.1| two-component system sensor-response regulator hybrid protein [Xanthomonas albilineans GPE PC73] emb|CBA15810.1| probable two-component system sensor-response regulator hybrid protein [Xanthomonas albilineans] Length = 1097 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 225/472 (47%), Positives = 304/472 (64%), Gaps = 6/472 (1%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ G+FF+AQ I GPDW+ VY +T +VL L+ +F TGA L AL F+WA T+YFD Sbjct: 312 FYRSGTFFVAQRIGGPDWIAVYAYTWEEVLGNLQHEFVTGALVCLLALGFMWATTVYFDL 371 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQSALTSS 133 V PL + A ++E+ FS+ IIDTLP+GI +YA + +L N VA +ML + Sbjct: 372 RVTKPLLRSAEKLIEAEHFSKAIIDTLPIGIGIYAPDTDTVMLENGVAQRMLGNLPDEGN 431 Query: 134 -GFYSQII---KAVRLGDDLQQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMID 189 GFY ++ A + D + + IE L EG S++G S+TRF GQ V+LLG++D Sbjct: 432 LGFYRHVMCERNAEAVAGD-RHSFIEVRWDLAEGQNSYIGVASSQTRFGGQPVVLLGLVD 490 Query: 190 LNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQR 249 +N +KA+E L+ EAK AD AN+AKSMFLA VSHEIRTPLHGA+GH+ELL+R LS Q Sbjct: 491 INERKANEMLLMEAKQTADEANRAKSMFLAIVSHEIRTPLHGAMGHLELLSRSPLSFEQG 550 Query: 250 QRIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGL 309 + +++IR +FD L+ LVN +LD TK+E+ ++K++ + N++LE CA+ F L G+ Sbjct: 551 EWVDMIRRSFDALLNLVNALLDSTKLEANALKINPVQMSPNEVLERCARSFGASILQGGV 610 Query: 310 AFQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFE 369 AF C+ L+ L GD +RL QILQNL+GNA KFT +G I +S+R L++ L RFE Sbjct: 611 AFYCVTDPDLDAMLEGDDQRLAQILQNLLGNAAKFTERGSIMISSRCLKQADGELWARFE 670 Query: 370 VSDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGR 429 V+DTGIG+ S + IF L QADDSISRRFGGTGLGL LCR L+ LMGG I++ SE G Sbjct: 671 VADTGIGIPASMQSAIFNPLAQADDSISRRFGGTGLGLFLCRNLSHLMGGRISVRSEPGT 730 Query: 430 GSVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGA 481 GSVF ++ + +P L G V + C A AML + L WGA Sbjct: 731 GSVFWVDLPFKRTGRALLAESRP-LEGFVVDVLCPHPAWRAMLAERLRRWGA 781 >emb|CCA87260.1| putative capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsC) [Ralstonia syzygii R24] Length = 1083 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 216/471 (45%), Positives = 295/471 (62%), Gaps = 4/471 (0%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ DG FF+++ I GPDW+ +Y + RDV + L+ +F TG + + AL +WA +YFD Sbjct: 297 FYKDGIFFVSRRIAGPDWIALYAYRWRDVASDLQREFFTGMLFCVLALGLLWAMAVYFDL 356 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQ-SALTS 132 V PL A ++E+ FS+ IIDTLP+GI VY+ S +L N VAA+ML S Sbjct: 357 RVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDSILLENCVAARMLGNVSDEQR 416 Query: 133 SGFYSQII--KAVRLGDDLQQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDL 190 FY ++ + Q + IE + EG S++G S TRF G +L G++D+ Sbjct: 417 RRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVASSWTRFGGSSAVLFGLVDM 476 Query: 191 NMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQ 250 N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGAIGH+ELLAR LS QR+ Sbjct: 477 NERKANEILLVEAKQTADEANRAKSMFLAIVGHEIRTPLHGAIGHLELLARSSLSLEQRE 536 Query: 251 RIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLA 310 +++ +FD L+ LVND+LD TKIE+ ++++ + N++LE CA+ F + G+A Sbjct: 537 WVDMTSRSFDALLTLVNDLLDSTKIEANALQISPVPMCPNEVLERCARSFGAAIVQGGVA 596 Query: 311 FQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEV 370 F C+ L+ + GD +RL QILQNL+ NA KFT +G IT+S+R L+RE ++ RFEV Sbjct: 597 FHCITDPDLDLIVDGDDQRLTQILQNLLSNAAKFTERGTITISSRCLKREDGKVWARFEV 656 Query: 371 SDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRG 430 +DTGIG+ + + IF L QADDSISRRFGGTGLGL LCR LA LMGG I++ SE G Sbjct: 657 ADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGGRISVRSEPSIG 716 Query: 431 SVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGA 481 S F ++ + A P P L+G SV L C + ML + L WGA Sbjct: 717 SAFRVDLPFVQNTRAPA-PPPPVLSGLSVELLCPVSWWREMLAERLRRWGA 766 >emb|CCA83593.1| putative capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsC) [blood disease bacterium R229] Length = 1098 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 217/471 (46%), Positives = 296/471 (62%), Gaps = 4/471 (0%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ DG FF+++ I GPDW+ +Y + RDV + L+ +F TG + + AL +WA +YFD Sbjct: 312 FYKDGIFFVSRRIAGPDWIALYAYRWRDVASDLQREFFTGMLFCVLALGLLWAMAVYFDL 371 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQ-SALTS 132 V PL A ++E+ FS+ IIDTLP+GI VY+ S +L N VAA+ML S Sbjct: 372 RVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDSILLENCVAARMLGNVSDEQR 431 Query: 133 SGFYSQII--KAVRLGDDLQQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDL 190 FY ++ + Q + IE + EG S++G S TRF G +L G++D+ Sbjct: 432 RRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVASSWTRFGGSSAVLFGLVDM 491 Query: 191 NMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQ 250 N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGAIGH+ELLAR LS QR+ Sbjct: 492 NERKANEILLVEAKQTADEANRAKSMFLAIVGHEIRTPLHGAIGHLELLARSSLSLEQRE 551 Query: 251 RIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLA 310 +++ +FD L+ LVND+LD TKIE+ ++++ + N++LE CA+ F + G+A Sbjct: 552 WVDMTSRSFDALLTLVNDLLDSTKIEANALQISPVPMCPNEVLERCARSFGAAIVQGGVA 611 Query: 311 FQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEV 370 F C+ L+ + GD +RL QILQNL+ NA KFT +G IT+S+R L+RE ++ RFEV Sbjct: 612 FHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTITISSRCLKREDGKVWARFEV 671 Query: 371 SDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRG 430 +DTGIG+ + + IF L QADDSISRRFGGTGLGL LCR LA LMGG I++ SE G G Sbjct: 672 ADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGGRISVRSEPGIG 731 Query: 431 SVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGA 481 S F ++ + A P P L+G SV L C + ML + L WGA Sbjct: 732 SAFRVDLPFVQNTRAPA-PPPPVLSGLSVELLCPVSLWCEMLAERLRRWGA 781 >ref|YP_003750644.1| capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsc) [Ralstonia solanacearum PSI07] emb|CBJ36047.1| putative capsular synthesis two-component sensor kinase and response regulator transcription regulator protein (rcsC) [Ralstonia solanacearum PSI07] Length = 1098 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 217/471 (46%), Positives = 296/471 (62%), Gaps = 4/471 (0%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ DG FF+++ I GPDW+ +Y + RDV + L+ +F TG + + AL +WA +YFD Sbjct: 312 FYKDGIFFVSRRIAGPDWIALYAYRWRDVASDLQREFFTGMLFCVLALGLLWAMAVYFDL 371 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQ-SALTS 132 V PL A ++E+ FS+ IIDTLP+GI VY+ S +L N VAA+ML S Sbjct: 372 RVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDFILLENCVAARMLGNVSDEQR 431 Query: 133 SGFYSQII--KAVRLGDDLQQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDL 190 FY ++ + Q + IE + EG S++G S TRF G +L G++D+ Sbjct: 432 RRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVASSWTRFGGSSAVLFGLVDM 491 Query: 191 NMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQ 250 N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGAIGH+ELLAR LS QR+ Sbjct: 492 NERKANEILLVEAKQTADEANRAKSMFLAIVGHEIRTPLHGAIGHLELLARSSLSLEQRE 551 Query: 251 RIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLA 310 +++ +FD L+ LVND+LD TKIE+ ++++ + N++LE CA+ F + G+A Sbjct: 552 WVDMTSRSFDALLTLVNDLLDSTKIEANALQISPVPMCPNEVLERCARSFGAAIVQGGVA 611 Query: 311 FQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEV 370 F C+ L+ + GD +RL QILQNL+ NA KFT +G IT+S+R L+RE ++ RFEV Sbjct: 612 FHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTITISSRCLKREDGKVWARFEV 671 Query: 371 SDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRG 430 +DTGIG+ + + IF L QADDSISRRFGGTGLGL LCR LA LMGG I++ SE G G Sbjct: 672 ADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGGRISVRSEPGIG 731 Query: 431 SVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGA 481 S F ++ + A P P L+G SV L C + ML + L WGA Sbjct: 732 SAFRVDLPFVQNTRAPA-PPPPVLSGLSVELLCPVSLWREMLAERLRRWGA 781 >ref|NP_523181.1| capsular synthesis two-component sensor kinase and response regulator transcription regulator protein [Ralstonia solanacearum GMI1000] emb|CAD18773.1| probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein [Ralstonia solanacearum GMI1000] Length = 1098 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 225/544 (41%), Positives = 321/544 (59%), Gaps = 8/544 (1%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ DG FF+++ I GPDW+ VY + +DV + L+ +F G + + L +WA YFD Sbjct: 312 FYKDGVFFVSRRIAGPDWIAVYAYRWQDVWSDLQHEFFAGMVFCVLVLGLLWATAAYFDL 371 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQSALTSS 133 V PL A ++E+ FS+ IIDTLP+GI VY+ + +L N+VA +ML + Sbjct: 372 RVTRPLLSDAKKLIEAEHFSKAIIDTLPIGIGVYSPETDSILLENSVAVRMLGNVSNEQR 431 Query: 134 GFYSQIIKAVRLGDDL---QQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDL 190 + + + R + + + + IE EG S++G S TRF G+ +LLG++D+ Sbjct: 432 LRFYRYVMHERDAEPVPGARHSFIEVRWERAEGQSSYIGVASSWTRFGGRSAVLLGLVDM 491 Query: 191 NMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQ 250 N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGA+GH+ELLAR LS QR+ Sbjct: 492 NERKANEILLMEAKQTADEANRAKSMFLAIVGHEIRTPLHGAMGHLELLARSALSLEQRE 551 Query: 251 RIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLA 310 +++ +FD L+ LVND+LD TK+E+ ++++ + N++LE CA+ F + G+A Sbjct: 552 WVDMTSRSFDALLTLVNDLLDSTKLEANALQISPVPMCPNEVLERCARSFGAAIVQGGVA 611 Query: 311 FQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEV 370 F C+ L+ + GD +RL QILQNL+ NA KFT +G IT+++R L+RE ++ RFEV Sbjct: 612 FHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTITIASRCLKREDGKVWARFEV 671 Query: 371 SDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRG 430 +DTGIG+ + + IF L QADDSISRRFGGTGLGL LCR LA LMGG I++ SE G G Sbjct: 672 ADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGGRISVRSEPGIG 731 Query: 431 SVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGA--ERCDPAM 488 S F ++ + A P P L G SV L C + ML + L WGA + + Sbjct: 732 SAFRVDLPFAQNTRAPA-PPPPVLTGLSVELLCPVSQWRGMLAERLRRWGATVRPAEASA 790 Query: 489 PHPHAIHLVAPDCVDEFMAAVQGDS--VKAVLICPDVVRHSSTAGRWRQVSAFDRKAWLR 546 P I L + AA G + V + H+ G+ +VS+F R+ L Sbjct: 791 AEPLHIRLAVEADGRAWHAADLGTVPLLGTVFVTAKGPLHAHRDGQKIEVSSFTREGLLA 850 Query: 547 ALAE 550 AL E Sbjct: 851 ALTE 854 >ref|ZP_04947579.1| Signal transduction histidine kinase [Burkholderia dolosa AUO158] gb|EAY70750.1| Signal transduction histidine kinase [Burkholderia dolosa AUO158] Length = 1104 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 219/494 (44%), Positives = 293/494 (59%), Gaps = 10/494 (2%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 D +F +AQ I GPDW+ VY F DV+ G+RG+ + AL +W YFDR Sbjct: 312 LRDGLTFIVAQRIAGPDWLAVYAFDWTDVVGGMRGEIAAAVLLCIGALALLWTGVGYFDR 371 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQSALTSS 133 V P ++ A +VE+ +F+++IIDT PVGIAV+ +L N VA + + Sbjct: 372 RVAQPFERDAKKLVEAEEFNRSIIDTAPVGIAVFDPERRSVILENAVARHLFGDAG-PHV 430 Query: 134 GFYSQIIKAVRLG-----DDLQQAMIEAELPLREG-GVSHLGAVWSRTRFSGQDVLLLGM 187 FY + +A D E+P + G ++GA S TRF G+D LL G+ Sbjct: 431 EFYEAVARAREQSMAVSSDRANTGHSFFEIPWKTASGEMYIGAASSATRFGGRDALLFGL 490 Query: 188 IDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPP 247 +D+ +K EA++ +A+ ADRAN+ KS+FLA +SHEIRTPLHGA GH+ELL+ L Sbjct: 491 VDITERKTTEAMLIDARRAADRANREKSIFLAIMSHEIRTPLHGATGHLELLSNTSLDAG 550 Query: 248 QRQRIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDK 307 QR+R+ LIR +FD L+ L+ND+LD T+IE+ ++ +++ + N + E CAQ F P L Sbjct: 551 QRERVGLIRRSFDSLLSLINDLLDTTRIEANALTVNALPIYVNRIAEYCAQHFAPTILAH 610 Query: 308 GLAFQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVR 367 +A C AL++ L GD +RLMQILQNLV NA KFT G I++ST LL R RL VR Sbjct: 611 NVALHCYTDPALDRLLEGDDQRLMQILQNLVSNAAKFTQHGTISVSTTLLDRHDDRLWVR 670 Query: 368 FEVSDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSEL 427 EV+DTGIG+ + + +FK L QAD SISRRFGGTGLGL LCR LAELMGG ITL SE Sbjct: 671 IEVADTGIGIPSALQAMVFKPLVQADASISRRFGGTGLGLFLCRNLAELMGGRITLQSEP 730 Query: 428 GRGSVFGAEIALTPAAASGAVSPQPELAGRSVALHCRDAAMAAMLGDYLAYWGAERC-DP 486 GS FG E+ L ++ P P L SVA+ DA + AM L +WGA C P Sbjct: 731 NVGSTFGIEVPLRMLESADEAPPAP-LRDISVAVAADDARLVAMWSGRLEHWGARVCAAP 789 Query: 487 AMPHPHAIHLVAPD 500 + P I + PD Sbjct: 790 SATRPD-ILIAGPD 802 >emb|CAQ18308.1| probable sensor histidine kinase transmembrane (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 869 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 196/409 (47%), Positives = 272/409 (66%), Gaps = 3/409 (0%) Query: 14 FHDDGSFFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDR 73 F+ DG+FF+++ I GPDW+ VY + RDV++ L+ +F TG + + AL +WA TLYFD Sbjct: 297 FYKDGTFFVSRRIAGPDWIAVYAYRWRDVVSDLQREFFTGMVFCVLALGLLWATTLYFDL 356 Query: 74 CVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQ-SALTS 132 V PL + A ++E+ FS+ IIDTLP+GI VY+ S +L N+VAA+ML S Sbjct: 357 RVTRPLLRDAKKLIEAEHFSKAIIDTLPIGIGVYSPESDSILLENSVAARMLGNVSDEQR 416 Query: 133 SGFYSQII--KAVRLGDDLQQAMIEAELPLREGGVSHLGAVWSRTRFSGQDVLLLGMIDL 190 FY ++ + Q + IE + EG S++G S TRF G +LLG++D+ Sbjct: 417 LRFYRHVMHERDAEPVPGAQHSFIEVRWEISEGQSSYIGVASSWTRFGGNSAVLLGLVDM 476 Query: 191 NMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQ 250 N +KA+E L+ EAK AD AN+AKSMFLA V HEIRTPLHGA+G++ELLAR LS QR+ Sbjct: 477 NERKANEILLMEAKQTADEANRAKSMFLAIVGHEIRTPLHGAMGYLELLARSSLSLEQRE 536 Query: 251 RIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLA 310 ++L +FD L+ LVND+LD TK+E+ ++++ + N++LE CA+ F + G+A Sbjct: 537 WVDLTSRSFDALLTLVNDLLDSTKLEANALQISPVPMCPNEVLERCARSFGAAIVQGGVA 596 Query: 311 FQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEV 370 F C+ L+ + GD +RL QILQNL+ NA KFT +G IT+++R L+RE ++ RFEV Sbjct: 597 FHCITDPDLDLVVDGDDQRLTQILQNLLSNAAKFTERGTITIASRCLKREDGKVWARFEV 656 Query: 371 SDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGG 419 +DTGIG+ + + IF L QADDSISRRFGGTGLGL LCR LA LMGG Sbjct: 657 ADTGIGIPAAMQSTIFNPLAQADDSISRRFGGTGLGLFLCRNLAHLMGG 705 >ref|YP_373634.1| multi-sensor hybrid histidine kinase [Burkholderia sp. 383] gb|ABB12990.1| multi-sensor hybrid histidine kinase [Burkholderia sp. 383] Length = 1003 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 164/431 (38%), Positives = 249/431 (57%), Gaps = 8/431 (1%) Query: 20 FFIAQTIEGPDWVVVYTFTLRDVLAGLRGDFTTGAFWGLFALLFVWAATLYFDRCVIGPL 79 F I+ + ++ TF+ R V + + LFA+ +W A + FD + P Sbjct: 323 FVISDRLPESGLTLITTFSWRSVASATAVGVSVTLAAALFAISMLWIAIVTFDLRALRPA 382 Query: 80 QKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAAQMLEQSALTSSGFYSQI 139 ++A+ ++ES F++T+I T P G+ + + GE ++RN A + ++ +I Sbjct: 383 NRRAIRLIESEAFNRTLIRTAPAGLLLLSAADGETMVRND--AVLAYDDGVSGLPLGKRI 440 Query: 140 IKAVR----LGDDLQQAMIEAELPLREGG--VSHLGAVWSRTRFSGQDVLLLGMIDLNMQ 193 +A R G D ++ +++ EL + G ++L A RT+F G DVLL + D+ + Sbjct: 441 WQACRERQRAGADERRFVMQQELAVERAGHDTTYLAAHVVRTKFRGVDVLLCTLTDVTAR 500 Query: 194 KAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMELLAREDLSPPQRQRIE 253 K E +REA+ AD AN+AKS FLA +SHEIRTPL+ IG++EL+ R +L P +++R++ Sbjct: 501 KLTEDKLREARVAADDANKAKSTFLATMSHEIRTPLNAIIGNLELMGRAELPPTEQRRLK 560 Query: 254 LIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQLFVPLALDKGLAFQC 313 I + D L+ ++ND+LD++K ES + L+ +L++ A +F PLA KGL+ +C Sbjct: 561 TIVSSSDALLNIINDVLDLSKAESNQMALEHIPFDLRRVLQDVASIFRPLADAKGLSLEC 620 Query: 314 LPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLRREGARLVVRFEVSDT 373 + L +GDP RL Q++ NLVGNA+KFT G IT+ RL R + V V DT Sbjct: 621 HVAAELADGYVGDPTRLRQLVSNLVGNAIKFTEHGGITIDARLARGDARAGCVEIAVRDT 680 Query: 374 GIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMGGDITLGSELGRGSVF 433 G+G+ A +F QAD SI RRFGGTGLGL LCRR+A LM G++T+ S LG GS F Sbjct: 681 GVGIPGEALPTLFDVYMQADASIYRRFGGTGLGLPLCRRIARLMDGELTVESRLGEGSTF 740 Query: 434 GAEIALTPAAA 444 A + LT A A Sbjct: 741 VATLPLTDAPA 751 >ref|ZP_02888099.1| histidine kinase [Burkholderia ambifaria IOP40-10] gb|EDT06409.1| histidine kinase [Burkholderia ambifaria IOP40-10] Length = 1026 Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 173/455 (38%), Positives = 250/455 (54%), Gaps = 21/455 (4%) Query: 15 HDDG----------SFFIAQTIEGPDWVVVYTFTLRDVLA--GLRGDFTTGAFWGLFALL 62 HDDG +F ++ + D VV+ T + R VL+ LR T LFA+ Sbjct: 311 HDDGERAAARRVGINFVVSDRVPRSDEVVMATISWRAVLSDVALRASLTVAP--ALFAIA 368 Query: 63 FVWAATLYFDRCVIGPLQKKALAMVESRQFSQTIIDTLPVGIAVYAHGSGEAVLRNTVAA 122 +W A + FDR + P ++A+ ++ES ++T+I T P G+ + + GE ++RN A Sbjct: 369 LLWIAIVKFDRRALRPANRRAIRLIESEALNRTLIRTAPAGLVLLSFADGETIMRND-AL 427 Query: 123 QMLEQSALTSSGFYSQIIKAVRLGDDLQQAMIEAELPL---REG-GVSHLGAVWSRTRFS 178 EQ A + ++ +A R G A L R G G ++L A RTR+ Sbjct: 428 LAYEQDA-SGEPLGKRLWRAYRDGAPPGNARTRVTRELAVERAGYGTAYLDAHIVRTRYR 486 Query: 179 GQDVLLLGMIDLNMQKAHEALMREAKSMADRANQAKSMFLAQVSHEIRTPLHGAIGHMEL 238 G DVLL ++D+ +K E +REA+ A+ AN+AKS FLA +SHEIRTPL+ IG++EL Sbjct: 487 GIDVLLCTLLDITTRKQAEEKLREAREAAEFANKAKSTFLATMSHEIRTPLNAIIGNLEL 546 Query: 239 LAREDLSPPQRQRIELIRHAFDMLMGLVNDILDITKIESQSIKLDSEALQANDLLEECAQ 298 + R ++ P R+R+ I + D L+ ++ND+LD++K ES + L+S ++ E A Sbjct: 547 MERAQMAAPLRRRLGTIMSSSDALLRVINDVLDLSKAESNQMALESIPFDLRRVVNEVAA 606 Query: 299 LFVPLALDKGLAFQCLPSVALEQALLGDPRRLMQILQNLVGNAVKFTAQGRITLSTRLLR 358 +F PLA K L C + L +GD RL Q++ NLV NA+KFT +G +T+ RL + Sbjct: 607 IFRPLADAKSLVLTCRIAPDLANGYVGDATRLRQLVSNLVSNAIKFTKRGGVTIDVRLAK 666 Query: 359 REGARLVVRFEVSDTGIGVSPSARQRIFKSLQQADDSISRRFGGTGLGLSLCRRLAELMG 418 A V VSDTGIG+ +F Q D SI RRFGGTGLGL LCRR+ LMG Sbjct: 667 AGPAGRCVEIAVSDTGIGIPEDGLPTLFDVYVQTDASIYRRFGGTGLGLPLCRRIVTLMG 726 Query: 419 GDITLGSELGRGSVFGAEIALTPAAASGAVSPQPE 453 G + + S LG G++F A + L P A SG PE Sbjct: 727 GALNVDSRLGEGTIFVAALPL-PEAPSGWRDDAPE 760