BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0073.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777041.1| riboflavin synthase subunit alpha [Herbaspir... 403 e-111 ref|YP_004754042.1| riboflavin synthase subunit alpha [Collimona... 309 1e-82 ref|ZP_02904725.1| riboflavin synthase, alpha subunit [Burkholde... 306 1e-81 ref|ZP_02893864.1| riboflavin synthase, alpha subunit [Burkholde... 305 3e-81 ref|YP_772713.1| riboflavin synthase subunit alpha [Burkholderia... 305 4e-81 ref|YP_001354123.1| riboflavin synthase subunit alpha [Janthinob... 304 5e-81 ref|ZP_02383066.1| riboflavin synthase subunit alpha [Burkholder... 303 8e-81 ref|YP_001807538.1| riboflavin synthase subunit alpha [Burkholde... 302 2e-80 ref|YP_001100623.1| riboflavin synthase subunit alpha [Herminiim... 302 2e-80 ref|ZP_08273465.1| Riboflavin synthase alpha chain [Oxalobactera... 301 3e-80 >ref|YP_003777041.1| riboflavin synthase subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ65133.1| riboflavin synthase (alpha chain) protein [Herbaspirillum seropedicae SmR1] Length = 206 Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust. Identities = 201/204 (98%), Positives = 203/204 (99%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA Sbjct: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES Sbjct: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTT KHLK Sbjct: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTFKHLK 180 Query: 181 AGSKVNLEIDLIARYVERMLSASK 204 AGSKVNLEIDLIARYVERMLS+S+ Sbjct: 181 AGSKVNLEIDLIARYVERMLSSSQ 204 >ref|YP_004754042.1| riboflavin synthase subunit alpha [Collimonas fungivorans Ter331] gb|AEK63219.1| Riboflavin synthase alpha chain [Collimonas fungivorans Ter331] Length = 208 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 151/204 (74%), Positives = 171/204 (83%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G ITSV PL + + GVRL ID G+L +ADV LGDSI+LNGACMTVVEK A Sbjct: 1 MFTGIVAAVGKITSVKPLGSSAEDGVRLKIDVGALSLADVALGDSISLNGACMTVVEKDA 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 F VDVSRESL T GLDA GEVNLEKALTLA+RLGGHLVSGHVDGLG V FEPVGES Sbjct: 61 GSFEVDVSRESLNRTVGLDAAGEVNLEKALTLADRLGGHLVSGHVDGLGLVQKFEPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL++ A + L KY AYKGS+VVNGVSLTVNRV+D+A+ C FSINLIPHT+EVT+LKHL+ Sbjct: 121 WELVIKAARDLAKYFAYKGSVVVNGVSLTVNRVDDVADGCLFSINLIPHTIEVTSLKHLQ 180 Query: 181 AGSKVNLEIDLIARYVERMLSASK 204 G +VNLE+DLIARYVERMLS + Sbjct: 181 VGKQVNLEVDLIARYVERMLSVDQ 204 >ref|ZP_02904725.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria MEX-5] gb|EDT44064.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria MEX-5] Length = 207 Score = 306 bits (783), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 152/204 (74%), Positives = 169/204 (82%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G I S+ PL A PDAGVRLT+ AG L +ADV LGDSIA+ GACMTV+EKT Sbjct: 1 MFTGIVAAVGRIESIDPLGAWPDAGVRLTVQAGGLDLADVALGDSIAIQGACMTVIEKTE 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 GF VDVSRESL T GL PGEVNLEKAL +RLGGH+VSGHVDGLG V F PVGES Sbjct: 61 TGFDVDVSRESLNRTVGLAQPGEVNLEKALRAHDRLGGHIVSGHVDGLGTVTRFAPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL + AP+ LG+YLAYKGSI VNGVSLTVN V+D A+ C FSINLIPHTVEVTTL+H+K Sbjct: 121 HELRIVAPRELGRYLAYKGSITVNGVSLTVNTVDDRADGCEFSINLIPHTVEVTTLRHVK 180 Query: 181 AGSKVNLEIDLIARYVERMLSASK 204 AG KVNLEID+IARYVERMLSAS+ Sbjct: 181 AGDKVNLEIDMIARYVERMLSASQ 204 >ref|ZP_02893864.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria IOP40-10] gb|EDT00560.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria IOP40-10] Length = 209 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 152/203 (74%), Positives = 168/203 (82%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G I S+ PL A PDAGVRLT+ AG L +ADV LGDSIA+ GACMTV+EKT Sbjct: 1 MFTGIVAAVGRIESINPLGASPDAGVRLTVHAGGLDLADVALGDSIAVQGACMTVIEKTE 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 GF VDVSRESL T GL PGEVNLEKAL +RLGGH+VSGHVDGLG V F PVGES Sbjct: 61 TGFDVDVSRESLNRTVGLAQPGEVNLEKALRAHDRLGGHIVSGHVDGLGTVTRFAPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL + AP+ LG+YLAYKGSI VNGVSLTVN V+D A+ C FSINLIPHTVEVTTL+H+K Sbjct: 121 HELRIVAPRELGRYLAYKGSITVNGVSLTVNTVDDRADGCEFSINLIPHTVEVTTLRHVK 180 Query: 181 AGSKVNLEIDLIARYVERMLSAS 203 AG KVNLEID+IARYVERMLSAS Sbjct: 181 AGDKVNLEIDMIARYVERMLSAS 203 >ref|YP_772713.1| riboflavin synthase subunit alpha [Burkholderia ambifaria AMMD] gb|ABI86379.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria AMMD] Length = 209 Score = 305 bits (780), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 152/203 (74%), Positives = 168/203 (82%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G I S+ PL A PDAGVRLT+ AG L +ADV LGDSIA+ GACMTV+EKT Sbjct: 1 MFTGIVAAVGRIESINPLGASPDAGVRLTVHAGGLDLADVALGDSIAIQGACMTVIEKTE 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 GF VDVSRESL T GL PGEVNLEKAL +RLGGH+VSGHVDGLG V F PVGES Sbjct: 61 TGFDVDVSRESLNRTVGLAQPGEVNLEKALRAHDRLGGHIVSGHVDGLGTVTRFAPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL + AP+ LG+YLAYKGSI VNGVSLTVN V+D A+ C FSINLIPHTVEVTTL+H+K Sbjct: 121 HELRIVAPRELGRYLAYKGSITVNGVSLTVNAVDDRADGCEFSINLIPHTVEVTTLRHVK 180 Query: 181 AGSKVNLEIDLIARYVERMLSAS 203 AG KVNLEID+IARYVERMLSAS Sbjct: 181 AGDKVNLEIDMIARYVERMLSAS 203 >ref|YP_001354123.1| riboflavin synthase subunit alpha [Janthinobacterium sp. Marseille] gb|ABR88697.1| riboflavin synthase alpha chain [Janthinobacterium sp. Marseille] Length = 203 Score = 304 bits (778), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 157/204 (76%), Positives = 170/204 (83%), Gaps = 1/204 (0%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAAIG IT +TPL +AG RLT+DAG LP+ADV LGDSI LNGACMTVV KT Sbjct: 1 MFTGIVAAIGKITHITPLG-DAEAGHRLTVDAGGLPLADVALGDSITLNGACMTVVAKTD 59 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 F VDVSRESL TAGLDA GEVNLEKA+TL+ERLGGHLVSGHVDGLG V FEPVGES Sbjct: 60 KQFDVDVSRESLNCTAGLDAIGEVNLEKAVTLSERLGGHLVSGHVDGLGVVSKFEPVGES 119 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 L V APK LGK++A KGSIV+NGVSLTVN V D A C FS+NLIPHTV+VTTLKHL+ Sbjct: 120 WLLAVTAPKELGKFIAVKGSIVINGVSLTVNTVVDSANGCTFSVNLIPHTVQVTTLKHLQ 179 Query: 181 AGSKVNLEIDLIARYVERMLSASK 204 AGSKVNLEIDLIARYVERMLS S+ Sbjct: 180 AGSKVNLEIDLIARYVERMLSQSQ 203 >ref|ZP_02383066.1| riboflavin synthase subunit alpha [Burkholderia ubonensis Bu] Length = 211 Score = 303 bits (777), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 150/203 (73%), Positives = 169/203 (83%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G I S+ PL A PDAGVRLT+ AG L +ADV LGDSIA+ GACMTV+EKTA Sbjct: 1 MFTGIVAAVGRIESIKPLGASPDAGVRLTVKAGGLDLADVALGDSIAIQGACMTVIEKTA 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 + F V+VSRESL LT GL PG+VNLEKAL +RLGGH+VSGHVDGLG V F PVGES Sbjct: 61 DAFDVEVSRESLNLTVGLAEPGDVNLEKALRAHDRLGGHIVSGHVDGLGTVSRFAPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL + AP+ LG+YLAYKGSI VNGVSLTVN V D A+ C FSINLIPHTVEVTTL+HL+ Sbjct: 121 HELRIVAPRQLGRYLAYKGSITVNGVSLTVNSVADRADGCEFSINLIPHTVEVTTLRHLR 180 Query: 181 AGSKVNLEIDLIARYVERMLSAS 203 AGS+VNLEID+IARYVERMLS S Sbjct: 181 AGSQVNLEIDMIARYVERMLSTS 203 >ref|YP_001807538.1| riboflavin synthase subunit alpha [Burkholderia ambifaria MC40-6] gb|ACB63322.1| riboflavin synthase, alpha subunit [Burkholderia ambifaria MC40-6] Length = 209 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 151/203 (74%), Positives = 168/203 (82%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G I S+ PL A PDAGVRLT+ AG L +ADV LGDSIA+ GACMTV+EKT Sbjct: 1 MFTGIVAAVGRIESINPLGASPDAGVRLTVHAGGLDLADVALGDSIAIQGACMTVIEKTE 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 GF VDVSRESL T GL PGEVNLEKAL +RLGGH+VSGHVDGLG V F PVGES Sbjct: 61 TGFDVDVSRESLNRTVGLAQPGEVNLEKALRAHDRLGGHIVSGHVDGLGTVTRFAPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL + AP+ LG+YLAYKGSI VNGVSLTVN V+D A+ C FSINLIPHTVEVTTL+++K Sbjct: 121 HELRIVAPRELGRYLAYKGSITVNGVSLTVNAVDDRADGCEFSINLIPHTVEVTTLRNVK 180 Query: 181 AGSKVNLEIDLIARYVERMLSAS 203 AG KVNLEID+IARYVERMLSAS Sbjct: 181 AGDKVNLEIDMIARYVERMLSAS 203 >ref|YP_001100623.1| riboflavin synthase subunit alpha [Herminiimonas arsenicoxydans] emb|CAL62502.1| riboflavin synthase alpha chain [Herminiimonas arsenicoxydans] Length = 205 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/204 (74%), Positives = 171/204 (83%), Gaps = 1/204 (0%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G IT+++PL AG RLT+DAG LP+ADV LGDSI LNGACMTVV KT Sbjct: 1 MFTGIVAAVGKITAISPLG-DQAAGHRLTVDAGGLPLADVALGDSITLNGACMTVVAKTE 59 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 + F VDVSRESL T GLDA GEVNLEKA+TL+ERLGGHLVSGHVDGLG V FEPVGES Sbjct: 60 STFEVDVSRESLNCTTGLDAIGEVNLEKAVTLSERLGGHLVSGHVDGLGTVQKFEPVGES 119 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 L+V APK L K++A KGSIV+NGVSLTVN V D A+AC FS+NLIPHTV+VTTLKHL+ Sbjct: 120 WLLVVKAPKELAKFIAVKGSIVINGVSLTVNTVADGADACEFSVNLIPHTVQVTTLKHLQ 179 Query: 181 AGSKVNLEIDLIARYVERMLSASK 204 GSKVNLEIDLIARYVERML+ S+ Sbjct: 180 TGSKVNLEIDLIARYVERMLTWSR 203 >ref|ZP_08273465.1| Riboflavin synthase alpha chain [Oxalobacteraceae bacterium IMCC9480] gb|EGF33052.1| Riboflavin synthase alpha chain [Oxalobacteraceae bacterium IMCC9480] Length = 210 Score = 301 bits (771), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 153/203 (75%), Positives = 170/203 (83%) Query: 1 MFTGIVAAIGTITSVTPLAAGPDAGVRLTIDAGSLPMADVGLGDSIALNGACMTVVEKTA 60 MFTGIVAA+G IT ++ P AGVRLTIDAG L ++DV LGDSIA+NGACMTVV KT Sbjct: 1 MFTGIVAAVGKITDLSAAGTEPGAGVRLTIDAGDLSLSDVVLGDSIAINGACMTVVSKTD 60 Query: 61 NGFTVDVSRESLRLTAGLDAPGEVNLEKALTLAERLGGHLVSGHVDGLGQVHSFEPVGES 120 F VDVSRESL TAGLDA GEVNLEKALTLA+RLGGHLVSGHVDGLG V +EPVGES Sbjct: 61 TTFAVDVSRESLNCTAGLDAAGEVNLEKALTLADRLGGHLVSGHVDGLGLVTRYEPVGES 120 Query: 121 RELIVDAPKALGKYLAYKGSIVVNGVSLTVNRVEDLAEACRFSINLIPHTVEVTTLKHLK 180 EL+++AP L KYLA+KGSIVVNGVSLTVNRV D AC FSINLIPHTV VTTL++L Sbjct: 121 WELVIEAPADLAKYLAFKGSIVVNGVSLTVNRVTDTPTACAFSINLIPHTVAVTTLRNLT 180 Query: 181 AGSKVNLEIDLIARYVERMLSAS 203 AGS+VNLEIDLIARYVERMLS++ Sbjct: 181 AGSRVNLEIDLIARYVERMLSSA 203