BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0479.p (131 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774501.1| hypothetical protein Hsero_1076 [Herbaspiril... 255 2e-66 ref|ZP_07395880.1| PIN domain-containing addiction module [Candi... 192 1e-47 gb|EGY29819.1| hypothetical protein Rin_00001980 [Candidatus Reg... 192 1e-47 ref|YP_298466.1| PilT protein, N-terminal [Ralstonia eutropha JM... 189 1e-46 ref|YP_004687097.1| protein PilT [Cupriavidus necator N-1] >gi|3... 187 6e-46 ref|ZP_02907907.1| PilT protein domain protein [Burkholderia amb... 184 4e-45 ref|ZP_02891740.1| PilT protein domain protein [Burkholderia amb... 184 5e-45 ref|YP_001811387.1| PilT domain-containing protein [Burkholderia... 184 6e-45 ref|YP_776081.1| PilT domain-containing protein [Burkholderia am... 183 8e-45 gb|EGD04779.1| PilT protein domain protein [Burkholderia sp. TJI49] 183 8e-45 >ref|YP_003774501.1| hypothetical protein Hsero_1076 [Herbaspirillum seropedicae SmR1] gb|ADJ62593.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 131 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/131 (99%), Positives = 131/131 (100%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +IILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME Sbjct: 1 MIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK Sbjct: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 Query: 121 IRAYPHVKTIW 131 IRAYPHVKTIW Sbjct: 121 IRAYPHVKTIW 131 >ref|ZP_07395880.1| PIN domain-containing addiction module [Candidatus Regiella insecticola LSR1] gb|EFL91427.1| PIN domain-containing addiction module [Candidatus Regiella insecticola LSR1] Length = 136 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/131 (70%), Positives = 112/131 (85%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTH LVWWV D LS A+ IE+E A G+IIIS+ISAWEIAMLV+RE+L+LSM+ Sbjct: 6 MIVLDTHVLVWWVADDSMLSVTAKAAIEEEQAKGEIIISSISAWEIAMLVQRERLLLSMD 65 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATV++I+AVR VPVD EV+ K+V LPGEFHKDPADRMIVATARK ++PLVTKDEK Sbjct: 66 VDSWLATVSQIDAVRFVPVDTEVATKSVELPGEFHKDPADRMIVATARKLAVPLVTKDEK 125 Query: 121 IRAYPHVKTIW 131 IR Y HV+TIW Sbjct: 126 IRTYAHVRTIW 136 >gb|EGY29819.1| hypothetical protein Rin_00001980 [Candidatus Regiella insecticola R5.15] Length = 131 Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/131 (70%), Positives = 112/131 (85%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTH LVWWV D LS A+ IE+E A G+IIIS+ISAWEIAMLV+RE+L+LSM+ Sbjct: 1 MIVLDTHVLVWWVADDSMLSVTAKAAIEEEQAKGEIIISSISAWEIAMLVQRERLLLSMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATV++I+AVR VPVD EV+ K+V LPGEFHKDPADRMIVATARK ++PLVTKDEK Sbjct: 61 VDSWLATVSQIDAVRFVPVDTEVATKSVELPGEFHKDPADRMIVATARKLAVPLVTKDEK 120 Query: 121 IRAYPHVKTIW 131 IR Y HV+TIW Sbjct: 121 IRTYAHVRTIW 131 >ref|YP_298466.1| PilT protein, N-terminal [Ralstonia eutropha JMP134] gb|AAZ63622.1| PilT protein, N-terminal [Ralstonia eutropha JMP134] Length = 136 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 90/131 (68%), Positives = 107/131 (81%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 VI+LDTH LVWW LS A+ I +E G I++SAISAWEIAMLVEREKLVLSM+ Sbjct: 6 VIVLDTHTLVWWASGSDELSATAKSTIHRECNEGQIVVSAISAWEIAMLVEREKLVLSMD 65 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 VE W+ TVA+IEA+ PVDV+VS+K+V LPGEFHKDPADRMIVATARK ++PL+T+DEK Sbjct: 66 VESWLDTVAQIEAITFYPVDVDVSIKSVQLPGEFHKDPADRMIVATARKLAVPLITRDEK 125 Query: 121 IRAYPHVKTIW 131 IRAY HV+TIW Sbjct: 126 IRAYEHVRTIW 136 >ref|YP_004687097.1| protein PilT [Cupriavidus necator N-1] gb|AEI78616.1| protein PilT [Cupriavidus necator N-1] Length = 131 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 87/131 (66%), Positives = 110/131 (83%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWW LS AR I++E+ G II+SAISAWE+AMLVERE+LVL+M+ Sbjct: 1 MIVLDTHALVWWATGSDELSDPARAAIDRELQDGQIIVSAISAWEVAMLVERERLVLAMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+AT+A+I+A+ VPVD E++ K+V LPG+FHKDPADRMIVATARK ++PLVT+DEK Sbjct: 61 VDTWLATIADIDAISFVPVDTEIATKSVHLPGDFHKDPADRMIVATARKLAVPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKTIW Sbjct: 121 IRAYSHVKTIW 131 >ref|ZP_02907907.1| PilT protein domain protein [Burkholderia ambifaria MEX-5] gb|EDT40969.1| PilT protein domain protein [Burkholderia ambifaria MEX-5] Length = 131 Score = 184 bits (466), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 106/131 (80%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWWV DP+LS+KAR I++ G + SAISAWEIAMLV E+L L+M+ Sbjct: 1 MIVLDTHALVWWVAGDPSLSKKARSAIDRARGEGTLAASAISAWEIAMLVRNERLALTMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATVA+I+ +R VPVD +++ K+ ALPG FHKDPADRMIVATAR+ PLVT+DEK Sbjct: 61 VDAWLATVAQIDGMRFVPVDADIAAKSTALPGTFHKDPADRMIVATARRLGAPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKT+W Sbjct: 121 IRAYAHVKTLW 131 >ref|ZP_02891740.1| PilT protein domain protein [Burkholderia ambifaria IOP40-10] gb|EDT02687.1| PilT protein domain protein [Burkholderia ambifaria IOP40-10] Length = 131 Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 106/131 (80%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWWV DP+LS+KAR I++ G + SAISAWEIAMLV E+L L+M+ Sbjct: 1 MIVLDTHALVWWVAGDPSLSKKARSAIDRARGEGALAASAISAWEIAMLVRNERLALTMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATVA+I+ +R VPVD +++ K+ ALPG FHKDPADRMIVATAR+ PLVT+DEK Sbjct: 61 VDTWLATVAQIDGMRFVPVDADIAAKSTALPGTFHKDPADRMIVATARRLGAPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKT+W Sbjct: 121 IRAYAHVKTLW 131 >ref|YP_001811387.1| PilT domain-containing protein [Burkholderia ambifaria MC40-6] gb|ACB67171.1| PilT protein domain protein [Burkholderia ambifaria MC40-6] Length = 131 Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 106/131 (80%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWWV DP+LS+KAR I++ G + SAISAWEIAMLV E+L L+M+ Sbjct: 1 MIVLDTHALVWWVAGDPSLSKKARSAIDRARGEGALAASAISAWEIAMLVRNERLALTMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATVA+I+ +R VPVD +++ K+ ALPG FHKDPADRMIVATAR+ PLVT+DEK Sbjct: 61 VDAWLATVAQIDGMRFVPVDADIAAKSTALPGTFHKDPADRMIVATARRLGAPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKT+W Sbjct: 121 IRAYAHVKTLW 131 >ref|YP_776081.1| PilT domain-containing protein [Burkholderia ambifaria AMMD] gb|ABI89747.1| PilT protein domain protein [Burkholderia ambifaria AMMD] Length = 131 Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 84/131 (64%), Positives = 106/131 (80%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWWV DP+LS+KAR I++ G + SAISAWEIAMLV E+L L+M+ Sbjct: 1 MIVLDTHALVWWVAGDPSLSKKARGAIDRARGEGALAASAISAWEIAMLVRNERLALTMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATVA+I+ +R VPVD +++ K+ ALPG FHKDPADRMIVATAR+ PLVT+DEK Sbjct: 61 VDAWLATVAQIDGMRFVPVDADIAAKSTALPGTFHKDPADRMIVATARRLGAPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKT+W Sbjct: 121 IRAYAHVKTLW 131 >gb|EGD04779.1| PilT protein domain protein [Burkholderia sp. TJI49] Length = 131 Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 83/131 (63%), Positives = 107/131 (81%) Query: 1 VIILDTHALVWWVGADPTLSRKARQVIEKEMAGGDIIISAISAWEIAMLVEREKLVLSME 60 +I+LDTHALVWWV DP+LS+KAR I++ + G + SAISAWEIAMLV ++L L+M+ Sbjct: 1 MIVLDTHALVWWVAGDPSLSKKARSAIDRARSEGTLAASAISAWEIAMLVRNDRLALTMD 60 Query: 61 VERWMATVAEIEAVRMVPVDVEVSVKAVALPGEFHKDPADRMIVATARKFSIPLVTKDEK 120 V+ W+ATVA+I+ +R VPVD +++ K+ ALPG FHKDPADRMIVATAR+ PLVT+DEK Sbjct: 61 VDAWLATVAQIDGMRFVPVDADIAAKSTALPGTFHKDPADRMIVATARRLGAPLVTRDEK 120 Query: 121 IRAYPHVKTIW 131 IRAY HVKT+W Sbjct: 121 IRAYAHVKTLW 131