BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0460.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774518.1| gluconate 5-dehydrogenase oxidoreductase [He... 461 e-128 ref|YP_003749614.1| gluconate 5-dehydrogenase (5-keto-d-gluconat... 340 7e-92 emb|CCA87893.1| gluconate 5-dehydrogenase (5-keto-D-gluconate 5-... 340 9e-92 ref|YP_003748192.1| gluconate 5-dehydrogenase (5-keto-D-gluconat... 340 1e-91 ref|ZP_00944906.1| Gluconate 5-dehydrogenase [Ralstonia solanace... 338 3e-91 ref|YP_002257656.1| gluconate 5-dehydrogenase protein [Ralstonia... 338 4e-91 ref|NP_522508.1| gluconate 5-dehydrogenase oxidoreductase protei... 338 4e-91 emb|CBJ40604.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-... 334 7e-90 ref|YP_550330.1| short-chain dehydrogenase/reductase SDR [Polaro... 332 3e-89 ref|YP_003607771.1| short-chain dehydrogenase/reductase SDR [Bur... 327 9e-88 >ref|YP_003774518.1| gluconate 5-dehydrogenase oxidoreductase [Herbaspirillum seropedicae SmR1] gb|ADJ62610.1| gluconate 5-dehydrogenase oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 264 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 224/226 (99%), Positives = 224/226 (99%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVK AVQKIESEIG IG Sbjct: 39 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKAAVQKIESEIGPIG 98 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS Sbjct: 99 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 158 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW Sbjct: 159 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 218 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL Sbjct: 219 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 264 >ref|YP_003749614.1| gluconate 5-dehydrogenase (5-keto-d-gluconate 5-reductase) [Ralstonia solanacearum PSI07] emb|CBJ34975.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum PSI07] Length = 258 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 161/226 (71%), Positives = 188/226 (83%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T S V + ++E+E+G I Sbjct: 33 LARAGARVVLNARGQEKLAQAADSLRAQGADVHTAAFDVTQSAAVTDGIARVEAELGPID 92 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ + WH+L+ TN++SVF QAVAR+MIPRG GKIINICSVQS Sbjct: 93 ILVNNAGMQRRAPLEQFETAQWHELMKTNVDSVFLVGQAVARYMIPRGRGKIINICSVQS 152 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG +GIQVNGLGPGYFKTE+ ALV +A+FT W Sbjct: 153 ELGRPGIAPYTASKGAVKMLTKGMAIDWGPHGIQVNGLGPGYFKTELTQALVANAEFTAW 212 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAA+FLAS AS FVNGHILYVDGGVTATL Sbjct: 213 LVGRTPSRRWGDVEDLVGAAIFLASKASDFVNGHILYVDGGVTATL 258 >emb|CCA87893.1| gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia syzygii R24] Length = 258 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 160/226 (70%), Positives = 188/226 (83%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA ++LN R KLA A LRA+G +H ++FD T S V + ++E+E+G I Sbjct: 33 LARAGARVILNARGQEKLAQAADSLRAQGADVHTAAFDVTQSAAVTDGIARVEAELGPID 92 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ + WH+L+ TN++SVF QAVAR+MIPRG GKIINICSVQS Sbjct: 93 ILVNNAGMQRRAPLEQFETAQWHELMKTNVDSVFLVGQAVARYMIPRGRGKIINICSVQS 152 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG +GIQVNGLGPGYFKTE+ ALV +A+FT W Sbjct: 153 ELGRPGIAPYTASKGAVKMLTKGMAIDWGPHGIQVNGLGPGYFKTELTQALVANAEFTAW 212 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAA+FLAS AS FVNGHILYVDGGVTATL Sbjct: 213 LVGRTPSRRWGDVEDLVGAAIFLASKASDFVNGHILYVDGGVTATL 258 >ref|YP_003748192.1| gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum CFBP2957] emb|CBJ53800.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum CFBP2957] Length = 266 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 162/226 (71%), Positives = 187/226 (82%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T S V + +IE+E+G I Sbjct: 41 LARAGARVVLNARGQEKLARAADSLRAQGADVHTAAFDVTDSATVTDGIARIEAELGPID 100 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ + WH+L+ TN++SVF QAVAR MIPR GKIINICSVQS Sbjct: 101 ILVNNAGMQRRAPLEQFETAQWHELMKTNVDSVFLVGQAVARCMIPRRRGKIINICSVQS 160 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG+YGIQVNGLGPGYFKTE+ ALV++ +FT W Sbjct: 161 ELGRPGIAPYTASKGAVKMLTKGMAIDWGQYGIQVNGLGPGYFKTELTQALVDNPEFTAW 220 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAAVFLAS AS FVNGHILYVDGGVTATL Sbjct: 221 LVGRTPSRRWGDVEDLVGAAVFLASQASDFVNGHILYVDGGVTATL 266 >ref|ZP_00944906.1| Gluconate 5-dehydrogenase [Ralstonia solanacearum UW551] gb|EAP72553.1| Gluconate 5-dehydrogenase [Ralstonia solanacearum UW551] Length = 277 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 162/226 (71%), Positives = 186/226 (82%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T S V + +IE+ +G I Sbjct: 52 LARAGARVVLNARGQEKLARAADSLRAQGADVHTAAFDVTDSAAVTDGIARIEAGLGPID 111 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ + WH L+ TN++SVF QAVAR MIPRG GKIINICSVQS Sbjct: 112 ILVNNAGMQRRAPLEQFETAQWHALMKTNVDSVFLVGQAVARCMIPRGRGKIINICSVQS 171 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG+YGIQVNGLGPGYFKTE+ ALV++ +FT W Sbjct: 172 ELGRPGIAPYTASKGAVKMLTKGMAIDWGQYGIQVNGLGPGYFKTELTQALVDNPEFTAW 231 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAAVFLAS AS FVNGHILYVDGGVTATL Sbjct: 232 LVGRTPSRRWGDVEDLVGAAVFLASQASDFVNGHILYVDGGVTATL 277 >ref|YP_002257656.1| gluconate 5-dehydrogenase protein [Ralstonia solanacearum IPO1609] emb|CAQ59542.1| gluconate 5-dehydrogenase protein [Ralstonia solanacearum IPO1609] Length = 258 Score = 338 bits (866), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 162/226 (71%), Positives = 186/226 (82%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T S V + +IE+ +G I Sbjct: 33 LARAGARVVLNARGQEKLARAADSLRAQGADVHTAAFDVTDSAAVTDGIARIEAGLGPID 92 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ + WH L+ TN++SVF QAVAR MIPRG GKIINICSVQS Sbjct: 93 ILVNNAGMQRRAPLEQFETAQWHALMKTNVDSVFLVGQAVARCMIPRGRGKIINICSVQS 152 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG+YGIQVNGLGPGYFKTE+ ALV++ +FT W Sbjct: 153 ELGRPGIAPYTASKGAVKMLTKGMAIDWGQYGIQVNGLGPGYFKTELTQALVDNPEFTAW 212 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDLVGAAVFLAS AS FVNGHILYVDGGVTATL Sbjct: 213 LVGRTPSRRWGDVEDLVGAAVFLASQASDFVNGHILYVDGGVTATL 258 >ref|NP_522508.1| gluconate 5-dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] emb|CAD18098.1| probable gluconate 5-dehydrogenase oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 258 Score = 338 bits (866), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 159/226 (70%), Positives = 186/226 (82%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T S V + ++E+E+G I Sbjct: 33 LARAGARVVLNARGPEKLAQAADSLRAQGADVHTAAFDVTQSTAVAEGIARVEAELGPID 92 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ WH+L+ TN++SVF QAVAR+MIPRG GKIINICSVQS Sbjct: 93 ILVNNAGMQRRAPLEQFETDQWHELMKTNVDSVFLVGQAVARYMIPRGRGKIINICSVQS 152 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG +G+QVNGLGPGYFKTE+ ALV +A+FT W Sbjct: 153 ELGRPGIAPYTASKGAVKMLTKGMAIDWGPHGLQVNGLGPGYFKTELTQALVANAEFTAW 212 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVEDL GAA+FLAS AS FVNGHILYVDGGVTATL Sbjct: 213 LVGRTPSRRWGDVEDLTGAAIFLASKASDFVNGHILYVDGGVTATL 258 >emb|CBJ40604.1| Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase) [Ralstonia solanacearum CMR15] Length = 258 Score = 334 bits (856), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 157/226 (69%), Positives = 185/226 (81%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A+AGA +VLN R KLA A LRA+G +H ++FD T V + ++E+E+G I Sbjct: 33 LARAGARVVLNARGQEKLAHAADSLRAQGADVHTAAFDVTQCTAVAEGIARVEAELGPID 92 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F+ WH+L+ TN++SVF QAVAR+MIPRG GKIINICSVQS Sbjct: 93 ILVNNAGMQRRAPLEQFETEQWHELMKTNVDSVFLVGQAVARYMIPRGRGKIINICSVQS 152 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRPGIAPYTA+KGAVKM TKGMAIDWG +G+QVNGLGPGYFKTE+ ALV +A+FT W Sbjct: 153 ELGRPGIAPYTASKGAVKMLTKGMAIDWGPHGLQVNGLGPGYFKTELTQALVANAEFTAW 212 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LVGRTPSRRWGDVE+L GAA+FLAS AS FVNGHILYVDGGVTATL Sbjct: 213 LVGRTPSRRWGDVEELAGAAIFLASKASDFVNGHILYVDGGVTATL 258 >ref|YP_550330.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] gb|ABE45432.1| short-chain dehydrogenase/reductase SDR [Polaromonas sp. JS666] Length = 272 Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 158/226 (69%), Positives = 182/226 (80%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 + QAGA +VLNGRDAG+L A LR+EG +H FD T +E V+ AVQ IES +G+I Sbjct: 47 LGQAGATLVLNGRDAGRLEQAAGVLRSEGLQVHTRMFDVTQAEAVEAAVQDIESTLGAIE 106 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PL EF WH+L+ TN++SVFF +AVAR MI R G+IIN+CSVQS Sbjct: 107 ILVNNAGMQRRMPLHEFSTEQWHELMRTNVDSVFFMGRAVARKMIERRRGRIINVCSVQS 166 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRP IAPYTA+KGAVKM TKGMAIDWG +GI VNGLGPGYF+TE+N LV D +F W Sbjct: 167 ELGRPNIAPYTASKGAVKMLTKGMAIDWGPHGINVNGLGPGYFRTELNEKLVADEQFNAW 226 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 L+GRTPSRRWG+VEDL GAAVFLASDAS FVNGHILYVDGGVTATL Sbjct: 227 LIGRTPSRRWGNVEDLGGAAVFLASDASSFVNGHILYVDGGVTATL 272 >ref|YP_003607771.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] gb|ADG18260.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1002] Length = 257 Score = 327 bits (838), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 157/226 (69%), Positives = 180/226 (79%) Query: 1 MAQAGAAIVLNGRDAGKLAAVAAQLRAEGHTIHESSFDATSSEEVKVAVQKIESEIGSIG 60 +A AGA +VLNGR+ +LA ++LR G +H FD T+ E V+ AV +IESEIG+I Sbjct: 32 LAGAGAEVVLNGRNEARLAEAVSRLRDAGGNVHGRCFDVTAPEAVETAVAQIESEIGAID 91 Query: 61 ILVNNAGIQRRNPLEEFKESDWHDLISTNLNSVFFAAQAVARHMIPRGAGKIINICSVQS 120 ILVNNAG+QRR PLE+F + W L+ TN++SVF QAVARHMI R GKIINICSVQS Sbjct: 92 ILVNNAGMQRRAPLEQFSHAQWEQLMKTNVDSVFLVGQAVARHMIARRRGKIINICSVQS 151 Query: 121 ELGRPGIAPYTATKGAVKMFTKGMAIDWGKYGIQVNGLGPGYFKTEMNMALVNDAKFTDW 180 ELGRP IA YTA+KGAVKM TKGMAIDWG+YGIQVNGLGPGY KTE+ ALVND F+ W Sbjct: 152 ELGRPNIAAYTASKGAVKMLTKGMAIDWGQYGIQVNGLGPGYIKTELTDALVNDEAFSSW 211 Query: 181 LVGRTPSRRWGDVEDLVGAAVFLASDASRFVNGHILYVDGGVTATL 226 LV RTPSRRWGDV DLVGAA+FLAS AS FVNGH+LYVDGGVTATL Sbjct: 212 LVNRTPSRRWGDVHDLVGAAIFLASGASDFVNGHVLYVDGGVTATL 257