BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0457.p         (301 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004214894.1| hypothetical protein Rahaq_4179 [Rahnella sp...    70   4e-10

>ref|YP_004214894.1| hypothetical protein Rahaq_4179 [Rahnella sp. Y9602]
 gb|ADW75767.1| hypothetical protein Rahaq_4179 [Rahnella sp. Y9602]
          Length = 224

 Score = 70.1 bits (170), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 130 AAQVALNIFMFALGGGMAVNTFSKDDLKGDKIEDVKDRNRVRNQVASGFTAQLSRALNTA 189
           AA V LN+    L GG+AVNTFSK++LKG +I+ + +  +        +    +R L T 
Sbjct: 65  AAGVGLNVLTSVLAGGIAVNTFSKENLKGSEIKTLPEPTK-------NYLTPRARPLITN 117

Query: 190 LQSQPEMKTATFKQRVMVAGGSAKLVYEALTGEQADLYKMSTNLSVYKRKESAGMLTFSP 249
              Q       +K  + +      LVY+ L+   +D Y++   +  YK+ E A M  FS 
Sbjct: 118 WL-QKNGNGYQYKNNLNIVAAQWLLVYKDLSSANSD-YELRYTIKFYKKPEDANM--FSA 173

Query: 250 FVEVSCNRTSEQALPLDEWAKDDYAQVEQWMAETFEQCSNKVVGALPDLL 299
           +V   C  T   A PL +W  ++YA V +   +  + C  ++   LP LL
Sbjct: 174 WVIAECTPTVVTA-PLADWQANNYALVTKTTEKYMDSCLLELDNQLPRLL 222