BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0446.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspir... 454 e-126 ref|YP_001793291.1| transketolase central region [Leptothrix cho... 388 e-106 ref|YP_004126990.1| transketolase central region protein [Alicyc... 353 1e-95 ref|YP_004418437.1| transketolase central region [Pusillimonas s... 352 2e-95 ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] >g... 347 7e-94 ref|YP_004379490.1| transketolase central region [Pseudomonas me... 343 7e-93 ref|ZP_03698000.1| Transketolase central region [Lutiella nitrof... 340 6e-92 ref|YP_004847922.1| transketolase central region [Pseudogulbenki... 340 7e-92 ref|YP_004491134.1| 1-deoxy-D-xylulose-5-phosphate synthase [Del... 335 3e-90 gb|EGD01514.1| transketolase domain protein [Burkholderia sp. TJ... 335 4e-90 >ref|YP_003774530.1| transketolase, C-terminal subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62622.1| transketolase, C-terminal subunit, protein [Herbaspirillum seropedicae SmR1] Length = 334 Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust. Identities = 219/221 (99%), Positives = 220/221 (99%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA Sbjct: 114 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 173 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE Sbjct: 174 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 233 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 ADK+SVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP Sbjct: 234 ADKVSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 293 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK 221 AGF LAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK Sbjct: 294 AGFQLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK 334 >ref|YP_001793291.1| transketolase central region [Leptothrix cholodnii SP-6] gb|ACB36526.1| Transketolase central region [Leptothrix cholodnii SP-6] Length = 338 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 181/220 (82%), Positives = 202/220 (91%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVK+CCALPGLTTGYGPSHQAT+D+AMMRAIPG+TIVDPCDALDLEQAVPQIA Sbjct: 118 VIAEENLNVKMCCALPGLTTGYGPSHQATDDIAMMRAIPGLTIVDPCDALDLEQAVPQIA 177 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH+GPVYMRLARGNVPLVLDEYDY FELG+AK +R+GN+VL+ISSGFMTMRALEVA+ L Sbjct: 178 AHKGPVYMRLARGNVPLVLDEYDYSFELGKAKMLREGNEVLVISSGFMTMRALEVAQTLA 237 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 AD + VAVLHCPTIKP DEAT++ VK K+RLVV+AENHSV+GGLGE VA+ L+RHRVQP Sbjct: 238 ADNIGVAVLHCPTIKPLDEATIIEAVKYKHRLVVIAENHSVIGGLGEAVASALLRHRVQP 297 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 AGF +AGLPDA+LDAGALPTLHDRYGIS E L RIK WL Sbjct: 298 AGFQMAGLPDAYLDAGALPTLHDRYGISREALAGRIKGWL 337 >ref|YP_004126990.1| transketolase central region protein [Alicycliphilus denitrificans BC] ref|YP_004388435.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] gb|ADV00103.1| Transketolase central region protein [Alicycliphilus denitrificans BC] gb|AEB84919.1| 1-deoxy-D-xylulose-5-phosphate synthase [Alicycliphilus denitrificans K601] Length = 334 Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 166/220 (75%), Positives = 186/220 (84%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPG+T+VDPCDALD+EQAVPQIA Sbjct: 114 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTVVDPCDALDIEQAVPQIA 173 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 H GPVYMRL RGNVPLVLDEYDYRFELG+AK +RDG DVL+ISSG +TMRALE A+ L Sbjct: 174 EHAGPVYMRLLRGNVPLVLDEYDYRFELGKAKLLRDGADVLVISSGLLTMRALEAARQLA 233 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 DK+ VAVLHCPTIKP D AT++A+ ++ RLVVVAENHS VGGLGE VA+ L++ V P Sbjct: 234 GDKVGVAVLHCPTIKPLDAATILAEARRPGRLVVVAENHSAVGGLGEAVASLLLQEGVTP 293 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 A F + LPD FLDAGALPTLHDRYGIS + +K WL Sbjct: 294 ARFRMLALPDTFLDAGALPTLHDRYGISTAKVAESLKAWL 333 >ref|YP_004418437.1| transketolase central region [Pusillimonas sp. T7-7] gb|AEC21813.1| transketolase central region [Pusillimonas sp. T7-7] Length = 333 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 168/221 (76%), Positives = 194/221 (87%), Gaps = 1/221 (0%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 +IAEE+LNVKICCALPGLTTGYGPSHQAT+D+AMMRA+PG+TIVDPCDALD++QAVP+IA Sbjct: 114 IIAEEHLNVKICCALPGLTTGYGPSHQATDDIAMMRAVPGLTIVDPCDALDIKQAVPEIA 173 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH GPVYMRL RGNVP+VLDEYDY+FELG+AK + DGNDVLIISSG +TMRALEVAKAL+ Sbjct: 174 AHPGPVYMRLLRGNVPVVLDEYDYKFELGKAKRLCDGNDVLIISSGLLTMRALEVAKALK 233 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 + + VAVLH PTIKP D AT++ + + RLVVVAENHSV+GGLGE VA L+ + V P Sbjct: 234 KENVGVAVLHVPTIKPLDRATILKEAGRSGRLVVVAENHSVMGGLGEAVAVLLLENGVTP 293 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK 221 A F LAGLPD FLDAGALPTLHDRYGIS EVL +RIK+WLK Sbjct: 294 A-FRLAGLPDEFLDAGALPTLHDRYGISTEVLSQRIKQWLK 333 >ref|YP_002945196.1| transketolase [Variovorax paradoxus S110] gb|ACS19930.1| Transketolase central region [Variovorax paradoxus S110] Length = 332 Score = 347 bits (890), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 164/220 (74%), Positives = 190/220 (86%), Gaps = 1/220 (0%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVK+CCALPGLTTGYGPSHQATEDLA+MR IPG+TI+DPCDALD+EQAVPQ+A Sbjct: 114 VIAEENLNVKMCCALPGLTTGYGPSHQATEDLALMRGIPGLTIIDPCDALDIEQAVPQMA 173 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 HQGPVYMRL RGNVP VLDEYDY+FELG+AK IRDG VL+I+SGFMTMR+LEVA+ L Sbjct: 174 DHQGPVYMRLPRGNVPRVLDEYDYKFELGKAKLIRDGKSVLVIASGFMTMRSLEVAEQLR 233 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 D + +AVLH PTIKP DEAT++A+V++ RLVVVAENHSV+GGLGE VA LMR V Sbjct: 234 NDGVDIAVLHVPTIKPLDEATILAEVRRLGRLVVVAENHSVIGGLGEAVAGLLMRSGVST 293 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 A + GLPDAFLDAGALPTLHDRYGIS +++ R+IK W+ Sbjct: 294 A-YRQIGLPDAFLDAGALPTLHDRYGISAQMMSRQIKGWV 332 >ref|YP_004379490.1| transketolase central region [Pseudomonas mendocina NK-01] gb|AEB57738.1| transketolase central region [Pseudomonas mendocina NK-01] Length = 332 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 167/220 (75%), Positives = 182/220 (82%), Gaps = 1/220 (0%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVK+CCALPGLTTGYGPSHQATED+A+MR IPGMTIVDPCDALD EQAVPQIA Sbjct: 113 VIAEENLNVKLCCALPGLTTGYGPSHQATEDIALMRGIPGMTIVDPCDALDTEQAVPQIA 172 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH GPVYMRL RGNVPLVLDEY Y FELG+AK +RDG DVL+ISSG +TMRALEVAKALE Sbjct: 173 AHNGPVYMRLLRGNVPLVLDEYGYSFELGKAKMLRDGRDVLVISSGILTMRALEVAKALE 232 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 AD++ V VLH PTIKP D AT++ + K RLVVVAENH+ VGGLGE VAT L+ V P Sbjct: 233 ADRIDVGVLHVPTIKPLDVATILREAGKAGRLVVVAENHTSVGGLGEAVATALLTAGVTP 292 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 F LPDAFLDAGALPTLHDRYGIS E + IK WL Sbjct: 293 Q-FRQIALPDAFLDAGALPTLHDRYGISTEAMSATIKGWL 331 >ref|ZP_03698000.1| Transketolase central region [Lutiella nitroferrum 2002] gb|EEG08742.1| Transketolase central region [Lutiella nitroferrum 2002] Length = 332 Score = 340 bits (873), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 164/220 (74%), Positives = 181/220 (82%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVK+CCALPGLTTGYGPSHQAT+DLAMMR +PG+TIVDPCDALD+EQAVP IA Sbjct: 113 VIAEENLNVKLCCALPGLTTGYGPSHQATDDLAMMRGVPGLTIVDPCDALDVEQAVPAIA 172 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH GPVYMRL RGNVPLVLDEYDYRFELG+AK +RDG DVLI+SSGFMTMRALE A+ L Sbjct: 173 AHNGPVYMRLLRGNVPLVLDEYDYRFELGKAKMLRDGRDVLILSSGFMTMRALETAEELR 232 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 + AVLH PTIKP D T++ +V K RLVVVAENHS +GGLGE VA L+ V+P Sbjct: 233 KHAIDAAVLHSPTIKPLDAETILHEVAKPGRLVVVAENHSEIGGLGEAVARLLLCSGVRP 292 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 A F LPDAFLDAGALPTLHDRYGIS E + RIK WL Sbjct: 293 AAFRQIALPDAFLDAGALPTLHDRYGISVEAMVTRIKSWL 332 >ref|YP_004847922.1| transketolase central region [Pseudogulbenkiania sp. NH8B] dbj|BAK77508.1| transketolase central region [Pseudogulbenkiania sp. NH8B] Length = 332 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 164/220 (74%), Positives = 181/220 (82%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVK+CCALPGLTTGYGPSHQAT+DLAMMR +PG+TIVDPCDALD+EQAVP IA Sbjct: 113 VIAEENLNVKLCCALPGLTTGYGPSHQATDDLAMMRGVPGLTIVDPCDALDVEQAVPAIA 172 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH GPVYMRL RGNVPLVLDEYDYRFELG+AK +RDG DVLI+SSGFMTMRALE A+ L Sbjct: 173 AHNGPVYMRLLRGNVPLVLDEYDYRFELGKAKMLRDGRDVLILSSGFMTMRALETAEELR 232 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 + AVLH PTIKP D T++ +V K RLVVVAENHS +GGLGE VA L+ V+P Sbjct: 233 KHAIDAAVLHSPTIKPLDAETILHEVAKPGRLVVVAENHSEIGGLGEAVARLLLCSGVRP 292 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 A F LPDAFLDAGALPTLHDRYGIS E + RIK WL Sbjct: 293 AAFRQIALPDAFLDAGALPTLHDRYGISVEAMVTRIKNWL 332 >ref|YP_004491134.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4] gb|AEF92779.1| 1-deoxy-D-xylulose-5-phosphate synthase [Delftia sp. Cs1-4] Length = 335 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 167/220 (75%), Positives = 186/220 (84%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENL+VKICCALPGLTTGYGPSHQAT+DLAMMRA+PG+TIVDPCDALD+ QAVPQIA Sbjct: 115 VIAEENLDVKICCALPGLTTGYGPSHQATDDLAMMRAVPGLTIVDPCDALDITQAVPQIA 174 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 AH+GPVYMRL RGNVPLVLDEYDYRFELG+AK +R+G +VLIISSGF+TMRALE A+ L Sbjct: 175 AHRGPVYMRLLRGNVPLVLDEYDYRFELGKAKMLREGREVLIISSGFLTMRALEAAQLLA 234 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 AD + AVLHC TIKP D +V V RLVVVAENHSVVGGLGE VA L+ V+P Sbjct: 235 ADNVGAAVLHCATIKPLDVQAIVQAVSSGPRLVVVAENHSVVGGLGEAVAGALLERDVRP 294 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWL 220 A F LAGLPDAFLDAGALPTLH+RYGIS + L RI+ WL Sbjct: 295 ARFRLAGLPDAFLDAGALPTLHERYGISAQALAGRIRRWL 334 >gb|EGD01514.1| transketolase domain protein [Burkholderia sp. TJI49] Length = 319 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 163/221 (73%), Positives = 183/221 (82%), Gaps = 1/221 (0%) Query: 1 VIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPCDALDLEQAVPQIA 60 VIAEENLNVKIC ALPGLTTGYGPSHQATEDLA+MRAIPG+T++DPCDALD EQAV IA Sbjct: 100 VIAEENLNVKICAALPGLTTGYGPSHQATEDLALMRAIPGLTVIDPCDALDTEQAVAAIA 159 Query: 61 AHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALE 120 A+ GPVYMRL RG VP VLD+YDYRFELG+AK +R+G DVL+ISSG MTMRALE A+AL+ Sbjct: 160 AYDGPVYMRLLRGKVPAVLDDYDYRFELGKAKLLREGADVLVISSGLMTMRALEAAQALD 219 Query: 121 ADKLSVAVLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQP 180 SVAVLH PTIKP DEAT+V Q +K RLV+VAENHSV+GGLG+ VA+TL+RHRV P Sbjct: 220 DGSASVAVLHVPTIKPLDEATIVEQCRKPGRLVIVAENHSVIGGLGDAVASTLVRHRVMP 279 Query: 181 AGFHLAGLPDAFLDAGALPTLHDRYGISCEVLGRRIKEWLK 221 F LPD FLDAGALPTLHDRYGIS + IK WLK Sbjct: 280 E-FRQIALPDRFLDAGALPTLHDRYGISTASIVANIKTWLK 319