BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0415.p (259 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774556.1| dipeptide/oligopeptide/nickel ABC transporte... 404 e-111 ref|YP_004750981.1| binding-protein-dependent transport systems ... 319 2e-85 ref|YP_004313529.1| ABC-type transporter integral membrane subun... 276 2e-72 ref|YP_002153778.1| putative binding-protein-dependent transport... 261 9e-68 ref|ZP_02888422.1| binding-protein-dependent transport systems i... 258 6e-67 ref|YP_001773889.1| binding-protein-dependent transport systems ... 257 1e-66 ref|YP_001816047.1| binding-protein-dependent transport systems ... 256 2e-66 ref|ZP_04589869.1| binding-protein-dependent transporter inner m... 256 3e-66 ref|ZP_02381310.1| binding-protein-dependent transport systems i... 255 4e-66 ref|YP_001341918.1| binding-protein-dependent transporter inner ... 255 6e-66 >ref|YP_003774556.1| dipeptide/oligopeptide/nickel ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62648.1| ABC-type dipeptide/oligopeptide/nickel transport systems,permease components [Herbaspirillum seropedicae SmR1] Length = 318 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/207 (99%), Positives = 206/207 (99%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MNGMVLRLI RRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG Sbjct: 1 MNGMVLRLIARRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL Sbjct: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA Sbjct: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 FIKAYAMPVLTLCCVIVAQMTRMTRAA Sbjct: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 >ref|YP_004750981.1| binding-protein-dependent transport systems inner membrane component [Collimonas fungivorans Ter331] gb|AEK60158.1| binding-protein-dependent transport systems inner membrane component [Collimonas fungivorans Ter331] Length = 326 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 186/207 (89%), Positives = 196/207 (94%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MNGMVLRLI+RRL A LTLLLVSAGVFFITNLLPGDAAQ ALGQAATPETVAALRLQYG Sbjct: 9 MNGMVLRLILRRLALAALTLLLVSAGVFFITNLLPGDAAQAALGQAATPETVAALRLQYG 68 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LDLPAPLRYA WLG+LLSGNPG+SLVNNVPVAQMIGGRLPASLMLAAVTA VSVPLAL L Sbjct: 69 LDLPAPLRYARWLGDLLSGNPGLSLVNNVPVAQMIGGRLPASLMLAAVTAAVSVPLALLL 128 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI SAMYRGS FDR VNVSAVS+VSVPEFL+AT+AVMIFAVKLRWLSALSH+ DAAT+GA Sbjct: 129 GIASAMYRGSTFDRVVNVSAVSLVSVPEFLIATIAVMIFAVKLRWLSALSHSADAATVGA 188 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 FIK+YAMPV+TLCCVIVAQMTRMTRAA Sbjct: 189 FIKSYAMPVMTLCCVIVAQMTRMTRAA 215 >ref|YP_004313529.1| ABC-type transporter integral membrane subunit [Marinomonas mediterranea MMB-1] gb|ADZ91693.1| ABC-type transporter, integral membrane subunit [Marinomonas mediterranea MMB-1] Length = 317 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 141/207 (68%), Positives = 164/207 (79%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN + RLIV RL VLTL +VS VF IT+LLPGDAAQ LGQ+ATPET+AALR ++G Sbjct: 1 MNSTIARLIVNRLGIGVLTLFIVSIVVFTITSLLPGDAAQEMLGQSATPETLAALRAEFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LD P +RY WLG LL G+PG SLVN +P+ ++IGGRLPASL LAA LVSVP+ALF+ Sbjct: 61 LDQPVYIRYIDWLGGLLVGDPGTSLVNGMPITELIGGRLPASLKLAAAATLVSVPVALFI 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GIFSAMYRGS FDR N+ AV VSVPEFL+AT+AV+IFAVKL WLSALSH D A+ Sbjct: 121 GIFSAMYRGSAFDRYSNMFAVFSVSVPEFLIATIAVLIFAVKLGWLSALSHISDDASFSE 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 ++AYAMPVLTLCCV+VAQM RMTRAA Sbjct: 181 MVRAYAMPVLTLCCVLVAQMARMTRAA 207 >ref|YP_002153778.1| putative binding-protein-dependent transport system protein [Burkholderia cenocepacia J2315] emb|CAR57320.1| putative binding-protein-dependent transport system component [Burkholderia cenocepacia J2315] Length = 317 Score = 261 bits (666), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 132/207 (63%), Positives = 167/207 (80%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN ++L LI RR+ LTLL+VSA +F ITNLLPGDAAQ ALGQ+ATPETVAALR Q+G Sbjct: 1 MNRILLGLIGRRIAVTALTLLIVSAIIFTITNLLPGDAAQAALGQSATPETVAALRQQFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LD+PA +RY HWLG LL G+ G SL ++PV+++IGGRLP SL LAA+T VSVP+AL L Sbjct: 61 LDMPAHVRYVHWLGGLLHGDFGRSLSGDMPVSELIGGRLPKSLALAAITTAVSVPIALLL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI +A+ R S DR +++ +S+V+ PEFL+ATVAV++FAVKLRWLSALS++G +L Sbjct: 121 GILAAVKRESVVDRVISLGTLSLVATPEFLIATVAVLVFAVKLRWLSALSYSGPIDSLHD 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 F++AYAMPVLTLC V++AQM RMTRAA Sbjct: 181 FLRAYAMPVLTLCAVVIAQMARMTRAA 207 >ref|ZP_02888422.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] gb|EDT06018.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria IOP40-10] Length = 317 Score = 258 bits (659), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 130/207 (62%), Positives = 166/207 (80%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN +++ LI RR+ LTLL+VSA +F ITNLLPGDAAQ ALGQ+ATPETVAALR Q+G Sbjct: 1 MNRILIGLIGRRIAVTALTLLIVSAIIFTITNLLPGDAAQAALGQSATPETVAALRQQFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LD+PA +RY HWLG LL G+ G SL ++PV+++IGGRLP SL LAA+T VSVP+AL L Sbjct: 61 LDMPAHVRYVHWLGGLLHGDFGRSLSGDMPVSELIGGRLPKSLTLAAITTAVSVPIALLL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI +A+ R S DR +++ +S+V+ PEFL+ATVAV++FAVKL WLSALS++G +L Sbjct: 121 GILAAVKRESAIDRVISLGTLSLVATPEFLIATVAVLVFAVKLHWLSALSYSGPIESLHD 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 F++AYAMPVLTLC V++AQM RMTRAA Sbjct: 181 FLRAYAMPVLTLCAVVIAQMARMTRAA 207 >ref|YP_001773889.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] gb|ACA95394.1| binding-protein-dependent transport systems inner membrane component [Burkholderia cenocepacia MC0-3] Length = 317 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 129/207 (62%), Positives = 165/207 (79%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN +++ LI RR+ LTLL+VSA +F ITNLLPGDAAQ ALGQ+ATPETVAALR Q+G Sbjct: 1 MNRILIGLIGRRIAVTALTLLIVSAIIFTITNLLPGDAAQAALGQSATPETVAALRQQFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LD+PA +RY HWLG LL G+ G S ++PV+++IGGRLP SL LAA+T VSVP+AL L Sbjct: 61 LDMPAHVRYLHWLGGLLHGDFGRSFSGDMPVSELIGGRLPKSLALAAITTAVSVPIALLL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI +A+ R S DR +++ +S+V+ PEFL+ATVAV++FAVKL WLSALS++G +L Sbjct: 121 GILAAVKRESVIDRVISLGTLSLVATPEFLIATVAVLVFAVKLHWLSALSYSGPIESLHD 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 F++AYAMPVLTLC V++AQM RMTRAA Sbjct: 181 FLRAYAMPVLTLCAVVIAQMARMTRAA 207 >ref|YP_001816047.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] gb|ACB68494.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ambifaria MC40-6] Length = 317 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 129/207 (62%), Positives = 165/207 (79%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN +++ LI RR+ LTLL+VSA +F ITNLLPGDAAQ ALGQ+ATPETVAALR Q+G Sbjct: 1 MNRILIGLIGRRIAVTALTLLIVSAIIFTITNLLPGDAAQAALGQSATPETVAALRQQFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LD+PA +RY HWLG LL G+ G S ++PV+++IGGRLP SL LAA+T VSVP+AL L Sbjct: 61 LDMPAHVRYLHWLGGLLHGDFGRSFSGDMPVSELIGGRLPKSLTLAAITTAVSVPIALLL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI +A+ R S DR +++ +S+V+ PEFL+ATVAV++FAVKL WLSALS++G +L Sbjct: 121 GILAAVKRESAIDRVISLGTLSLVATPEFLIATVAVLVFAVKLHWLSALSYSGPIESLHD 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 F++AYAMPVLTLC V++AQM RMTRAA Sbjct: 181 FLRAYAMPVLTLCAVVIAQMARMTRAA 207 >ref|ZP_04589869.1| binding-protein-dependent transporter inner membrane component [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI04325.1| binding-protein-dependent transporter inner membrane component [Pseudomonas syringae pv. oryzae str. 1_6] Length = 317 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 131/207 (63%), Positives = 154/207 (74%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN + RL+ RL V+TLL VS VFF+TNLLPGDA Q LGQ ATPE +AALR Q G Sbjct: 1 MNSTIARLVGGRLAVGVITLLFVSLVVFFLTNLLPGDAVQEQLGQEATPEVLAALRAQLG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LDLP LRY +WLG L++GNPG+SLVN +PV +MI RLP +L L A+ AL SVPLAL + Sbjct: 61 LDLPVHLRYVNWLGGLITGNPGVSLVNGMPVDEMIASRLPNTLKLGAIAALFSVPLALVI 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GI SAMYRGS FDR N+ V VSVPEFL+ATVAV+IFAVKL WL ALS + + + G Sbjct: 121 GILSAMYRGSIFDRYSNMLTVFAVSVPEFLIATVAVLIFAVKLGWLPALSRSVETESFGE 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 + YA+PVLTLCCV+ AQM RMTRAA Sbjct: 181 LVHVYALPVLTLCCVLTAQMARMTRAA 207 >ref|ZP_02381310.1| binding-protein-dependent transport systems inner membrane component [Burkholderia ubonensis Bu] Length = 317 Score = 255 bits (652), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 131/207 (63%), Positives = 166/207 (80%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN ++L LI RR+ LTLL+VSA +F ITNLLPGDAAQ ALGQ+ATPETVAALR Q+G Sbjct: 1 MNRILLGLIGRRIAVTALTLLIVSAIIFTITNLLPGDAAQAALGQSATPETVAALRRQFG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 L++PA +RY HWL LL G+ G SL ++PV++MIGGRLP SL LAA+T VSVP+AL L Sbjct: 61 LNMPAHVRYLHWLAGLLHGDFGRSLSGDMPVSEMIGGRLPKSLTLAAITTAVSVPIALLL 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GIF+A+ R S DRA+++ +S+V+ PEFL+ATVAV++ AVKL WLSALS++G +L Sbjct: 121 GIFAAVKRESATDRAISLGTLSLVATPEFLIATVAVLVLAVKLHWLSALSYSGPIESLHN 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 F++AYAMPVLTLC V++AQM RMTRAA Sbjct: 181 FLRAYAMPVLTLCAVVIAQMARMTRAA 207 >ref|YP_001341918.1| binding-protein-dependent transporter inner membrane component [Marinomonas sp. MWYL1] gb|ABR71983.1| binding-protein-dependent transport systems inner membrane component [Marinomonas sp. MWYL1] Length = 317 Score = 255 bits (651), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 134/207 (64%), Positives = 158/207 (76%) Query: 1 MNGMVLRLIVRRLLQAVLTLLLVSAGVFFITNLLPGDAAQTALGQAATPETVAALRLQYG 60 MN + RLI+ R+ VLTL +VS +F ITNLLPGDAAQ LGQ+ATPET+AALR Q G Sbjct: 1 MNQTISRLIMNRIGLGVLTLWIVSLVIFIITNLLPGDAAQELLGQSATPETLAALRTQLG 60 Query: 61 LDLPAPLRYAHWLGNLLSGNPGMSLVNNVPVAQMIGGRLPASLMLAAVTALVSVPLALFL 120 LDLP RY WLG LL G+ G S+VN + + ++I RLP +L+LAA A VSVP+AL + Sbjct: 61 LDLPIYTRYIQWLGGLLVGDAGYSMVNGMSIMELIWSRLPNTLVLAAFAASVSVPIALSI 120 Query: 121 GIFSAMYRGSFFDRAVNVSAVSMVSVPEFLVATVAVMIFAVKLRWLSALSHAGDAATLGA 180 GIFSAMYRGS+FDR +N+ AV VSVPEFL+AT+AV+IFAVKL WLSALSH A T G Sbjct: 121 GIFSAMYRGSWFDRYINMMAVFAVSVPEFLIATIAVLIFAVKLGWLSALSHVESAHTFGE 180 Query: 181 FIKAYAMPVLTLCCVIVAQMTRMTRAA 207 IK YAMPVLTLC V+VAQM RMTRAA Sbjct: 181 MIKVYAMPVLTLCSVLVAQMARMTRAA 207