BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0399.p (236 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774569.1| GntR family transcription regulator protein ... 467 e-130 ref|YP_004360225.1| GntR family transcription regulator protein ... 324 9e-87 ref|YP_001889983.1| GntR family transcriptional regulator [Burkh... 305 4e-81 ref|ZP_06841409.1| transcriptional regulator, GntR family [Burkh... 305 5e-81 ref|ZP_03268524.1| transcriptional regulator, GntR family [Burkh... 303 1e-80 ref|YP_003609853.1| GntR family transcriptional regulator [Burkh... 298 6e-79 ref|ZP_02882890.1| transcriptional regulator, GntR family [Burkh... 296 1e-78 gb|EFV86342.1| GntR family Transcriptional regulator [Achromobac... 271 6e-71 gb|EGP43434.1| GntR family regulatory protein 32 [Achromobacter ... 265 5e-69 ref|YP_003979014.1| GntR family transcriptional regulator [Achro... 263 2e-68 >ref|YP_003774569.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ62661.1| GntR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 236 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 234/236 (99%), Positives = 234/236 (99%) Query: 1 MTSTSTAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTP 60 MTSTSTAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTP Sbjct: 1 MTSTSTAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTP 60 Query: 61 IRDALIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVN 120 IRDALIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLA Q DAALVN Sbjct: 61 IRDALIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAAQADAALVN 120 Query: 121 RLRDSIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHV 180 RLRDSIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHV Sbjct: 121 RLRDSIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHV 180 Query: 181 PIPGKTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 PIPGKTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD Sbjct: 181 PIPGKTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 >ref|YP_004360225.1| GntR family transcription regulator protein [Burkholderia gladioli BSR3] gb|AEA60269.1| GntR family transcription regulator protein [Burkholderia gladioli BSR3] Length = 242 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 170/232 (73%), Positives = 197/232 (84%) Query: 5 STAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDA 64 +++P + P DRSRHAAPQVFEHLRELI+ MR+AP TVLQRAELAA YGLSQTPIRDA Sbjct: 11 ASSPAELNAPSFDRSRHAAPQVFEHLRELIVAMRIAPGTVLQRAELAALYGLSQTPIRDA 70 Query: 65 LIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRD 124 LI+LGEEGLVDIFPQHATVVS+++V LARQ FLRRSIELEIVH LA A L+ RL D Sbjct: 71 LIRLGEEGLVDIFPQHATVVSSIDVPLARQQLFLRRSIELEIVHRLASAPSAPLLARLAD 130 Query: 125 SIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPG 184 SIE+QR+ A RENY EFV AD+AFH+ MY+AA+V +LW++VRRQSGHLDRLRNLHVPIPG Sbjct: 131 SIELQRMHAARENYVEFVHADEAFHKLMYDAAEVMDLWTLVRRQSGHLDRLRNLHVPIPG 190 Query: 185 KTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 KT RVL HAAIV AIAAG+P AAQAALR HLSGTL+Q++EIR RF ++K+ Sbjct: 191 KTERVLEQHAAIVAAIAAGNPEAAQAALRAHLSGTLSQVDEIRARFGGFLKN 242 >ref|YP_001889983.1| GntR family transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD20612.1| transcriptional regulator, GntR family [Burkholderia phytofirmans PsJN] Length = 234 Score = 305 bits (781), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 153/221 (69%), Positives = 178/221 (80%) Query: 16 LDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEEGLVD 75 LDRSRHAAPQVFE LRE+I+ + LAP TVL RA+LA QYGLSQTP+RDAL+KLGEEGLVD Sbjct: 13 LDRSRHAAPQVFERLREMILSLELAPGTVLSRADLATQYGLSQTPVRDALMKLGEEGLVD 72 Query: 76 IFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRVLAGR 135 IFPQHATVVS +NVT A QAHFLRRSIELEIV TLA Q DAAL+ +LR +I Q + Sbjct: 73 IFPQHATVVSQINVTSALQAHFLRRSIELEIVRTLAEQRDAALIAQLRATIAGQMEVRDP 132 Query: 136 ENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLRDHAA 195 +N +F L DQAFHRQMYEAA VP+LW +VRR SGH+DRLR LH+P+ GKT V+RDH Sbjct: 133 KNIEQFSLLDQAFHRQMYEAAGVPQLWDLVRRLSGHIDRLRRLHLPVEGKTMAVVRDHTE 192 Query: 196 IVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 IVDAI GD AAQAALR HLSGTL+Q+++IR R P ++ D Sbjct: 193 IVDAIERGDAEAAQAALRNHLSGTLSQVDQIRTRHPDFLTD 233 >ref|ZP_06841409.1| transcriptional regulator, GntR family [Burkholderia sp. Ch1-1] gb|EFG70935.1| transcriptional regulator, GntR family [Burkholderia sp. Ch1-1] Length = 234 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/225 (67%), Positives = 179/225 (79%) Query: 12 TPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEE 71 T LDRSRHAAPQVFE LRE+I+ + LAP TVL RA+LA QYGLSQTP+RDAL+KLGEE Sbjct: 9 TATRLDRSRHAAPQVFERLREMILSLELAPGTVLSRADLAIQYGLSQTPVRDALMKLGEE 68 Query: 72 GLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRV 131 GLVDIFPQHATVVS +NVT A QAHFLRRSIELE+V TLA Q DAAL +LR +I Q Sbjct: 69 GLVDIFPQHATVVSQINVTSALQAHFLRRSIELEVVRTLAEQRDAALTGQLRATIARQME 128 Query: 132 LAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLR 191 L +NY +F + DQAFHRQMYEAA VP+LW +VRR SGH+DRLR LH+P+ GKT V+R Sbjct: 129 LRDLKNYEQFSVLDQAFHRQMYEAAGVPQLWDLVRRLSGHIDRLRRLHLPVEGKTMAVVR 188 Query: 192 DHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 DH IV+AI GD AAQAALR+HLSGTL Q+++IR P+++ D Sbjct: 189 DHTEIVEAIEKGDVEAAQAALRKHLSGTLNQVDQIRNSHPNFLTD 233 >ref|ZP_03268524.1| transcriptional regulator, GntR family [Burkholderia sp. H160] gb|EDZ99878.1| transcriptional regulator, GntR family [Burkholderia sp. H160] Length = 234 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/236 (64%), Positives = 184/236 (77%), Gaps = 3/236 (1%) Query: 1 MTSTSTAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTP 60 M + +T+ +V LDRSRHAAPQVFE LRE+I+ + L P TVL R ELA QYGLSQTP Sbjct: 1 MKNHATSSVV---KRLDRSRHAAPQVFERLREMILSLELTPGTVLSRTELANQYGLSQTP 57 Query: 61 IRDALIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVN 120 +RDAL+KLGEEGLVDI+PQHATVVS +NVT A QAHFLRRSIELE+V TLA Q DAAL+ Sbjct: 58 VRDALMKLGEEGLVDIYPQHATVVSQINVTSALQAHFLRRSIELEVVRTLAEQRDAALIA 117 Query: 121 RLRDSIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHV 180 +LR +I Q L +NY +F L DQAFHRQMYEAA VP+LW +VRR SGH+DRLR L++ Sbjct: 118 QLRATIARQTELLDLKNYEQFSLLDQAFHRQMYEAAGVPQLWDLVRRLSGHIDRLRRLNL 177 Query: 181 PIPGKTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 P+ GKT V+RDH IVDAI GD AAQAALR+HLSGTL+Q+++IR P ++ D Sbjct: 178 PVEGKTMAVVRDHTEIVDAIDKGDVEAAQAALRKHLSGTLSQIDQIRASHPDFLAD 233 >ref|YP_003609853.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1002] gb|ADG20342.1| transcriptional regulator, GntR family [Burkholderia sp. CCGE1002] Length = 234 Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 149/225 (66%), Positives = 177/225 (78%) Query: 12 TPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEE 71 T LDRSRHAAPQVFE LRE+I+ + L P TVL R ELA +YGLSQTP+RDAL+KLGEE Sbjct: 9 TVTRLDRSRHAAPQVFERLREMILSLELTPGTVLSRTELANRYGLSQTPVRDALMKLGEE 68 Query: 72 GLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRV 131 GLVDI+PQHATVVS + VT A QAHFLRRSIELE+V TLA Q +A L+ LR +I Q Sbjct: 69 GLVDIYPQHATVVSQIKVTSALQAHFLRRSIELEVVRTLAEQHNATLIAELRVTIARQTE 128 Query: 132 LAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLR 191 L +NY EF L DQAFHRQMYEAA VP+LW +VRR SGH+DRLR L++P+ GKT V+R Sbjct: 129 LLDLKNYEEFSLLDQAFHRQMYEAAGVPQLWDLVRRLSGHIDRLRRLNLPVEGKTMAVVR 188 Query: 192 DHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 DHA IVDAI GD AAQAALR+HLSGTL+Q+++IR P+++ D Sbjct: 189 DHAEIVDAIEKGDVDAAQAALRKHLSGTLSQIDQIRTSHPNFLAD 233 >ref|ZP_02882890.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] gb|EDT11174.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] Length = 234 Score = 296 bits (758), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 151/236 (63%), Positives = 179/236 (75%), Gaps = 3/236 (1%) Query: 1 MTSTSTAPIVITPPPLDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTP 60 M + +++ +V LDRSRHAAPQVFE LRE+I+ + L P TVL RAELA +YGLSQTP Sbjct: 1 MKNNASSSVVTR---LDRSRHAAPQVFERLREMILSLELTPGTVLSRAELANRYGLSQTP 57 Query: 61 IRDALIKLGEEGLVDIFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVN 120 +RDAL+KLGEEGLVDIFPQHATVVS +NV+ A QAHFLRRSIELE+V TLA Q DAAL+ Sbjct: 58 VRDALMKLGEEGLVDIFPQHATVVSQINVSSALQAHFLRRSIELEVVRTLAEQHDAALIA 117 Query: 121 RLRDSIEVQRVLAGRENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHV 180 LR +I Q L NY F L DQ FHRQMYEAA VP+LW +VRR SGH+DRLR LH+ Sbjct: 118 ALRATIARQTELLDLNNYERFALFDQTFHRQMYEAAGVPQLWDLVRRLSGHIDRLRRLHL 177 Query: 181 PIPGKTARVLRDHAAIVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVKD 236 P+ GKT V+++H IVDAI GD AAQAALR HLSGTL Q+E+IR P ++ D Sbjct: 178 PVEGKTMAVVQEHTEIVDAIERGDATAAQAALRGHLSGTLHQIEQIRTSHPDFLTD 233 >gb|EFV86342.1| GntR family Transcriptional regulator [Achromobacter xylosoxidans C54] Length = 233 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 139/219 (63%), Positives = 164/219 (74%) Query: 16 LDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEEGLVD 75 LDRSRHAAPQVFEHLRE I+ + LAP L R ELA YGLSQTPIRDAL+KL EE LV+ Sbjct: 8 LDRSRHAAPQVFEHLREQIMSLALAPGAPLSRVELAEAYGLSQTPIRDALMKLAEEALVE 67 Query: 76 IFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRVLAGR 135 I+PQH TVVS +++ ARQAHFLRRSIELEIVH LA + D LV RL+ SI+ QRV Sbjct: 68 IYPQHTTVVSRIDIAAARQAHFLRRSIELEIVHLLAQKPDPLLVQRLQASIDRQRVCHAA 127 Query: 136 ENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLRDHAA 195 Y +F+ ADQAFHR M+ AA V LW M +R SGH+DRLR LH+P GK R++ DH Sbjct: 128 GQYQQFMEADQAFHRDMHTAAGVTALWDMEQRYSGHVDRLRRLHLPEAGKAERIMDDHQR 187 Query: 196 IVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYV 234 ++DAIAAGD AQ ALREHLSGTL+Q+ EI +R+P YV Sbjct: 188 VLDAIAAGDAPRAQQALREHLSGTLSQVAEICKRYPDYV 226 >gb|EGP43434.1| GntR family regulatory protein 32 [Achromobacter xylosoxidans AXX-A] Length = 229 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 137/220 (62%), Positives = 162/220 (73%) Query: 16 LDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEEGLVD 75 LDRSRHAAPQVFEHLRE I+ + LAP L R LA YGLSQTPIRDAL+KL EE LV+ Sbjct: 8 LDRSRHAAPQVFEHLREQIMSLELAPGAPLSRVTLAEAYGLSQTPIRDALMKLAEEALVE 67 Query: 76 IFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRVLAGR 135 I+PQH TVVS +++ ARQAHFLRRSIELEIVH LA LV RL+ SI+ QRV Sbjct: 68 IYPQHTTVVSRIDIAAARQAHFLRRSIELEIVHVLAQAPYPLLVQRLQASIDRQRVCHAA 127 Query: 136 ENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLRDHAA 195 Y +F+ ADQAFHR M+ AA V LW M +R SGH+DRLR LH+P GK R++ DH Sbjct: 128 GEYQQFMEADQAFHRDMHGAAGVTALWDMEQRYSGHVDRLRRLHLPEAGKAERIMDDHQR 187 Query: 196 IVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYVK 235 ++DAIAAGD AQ ALREHLSGTL+Q+ EI +R+P YV+ Sbjct: 188 VLDAIAAGDAPRAQQALREHLSGTLSQVAEICKRYPDYVQ 227 >ref|YP_003979014.1| GntR family transcriptional regulator [Achromobacter xylosoxidans A8] gb|ADP16299.1| bacterial regulatory protein, GntR family protein 32 [Achromobacter xylosoxidans A8] Length = 229 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 134/219 (61%), Positives = 160/219 (73%) Query: 16 LDRSRHAAPQVFEHLRELIIGMRLAPATVLQRAELAAQYGLSQTPIRDALIKLGEEGLVD 75 LDRSRHAAPQVFEHLRE I+ + LAP L R LA YGLSQTPIRDAL++L EE LV+ Sbjct: 8 LDRSRHAAPQVFEHLREQILSLELAPGAPLSRITLAETYGLSQTPIRDALMRLAEEALVE 67 Query: 76 IFPQHATVVSAVNVTLARQAHFLRRSIELEIVHTLAVQVDAALVNRLRDSIEVQRVLAGR 135 I+PQH TVVS ++V AR+AHFLRRS+ELEIV LA + D L RL+ SI++QR Sbjct: 68 IYPQHTTVVSRIDVAAAREAHFLRRSLELEIVQMLAQRPDPQLFQRLQASIDLQRASHAS 127 Query: 136 ENYAEFVLADQAFHRQMYEAAQVPELWSMVRRQSGHLDRLRNLHVPIPGKTARVLRDHAA 195 Y F+ ADQAFHR M+EAA V LW + +R SGHLDRLR LH+P GK R+L DH Sbjct: 128 AQYQRFIDADQAFHRDMHEAAGVIRLWELAQRYSGHLDRLRRLHLPEAGKAERILDDHQR 187 Query: 196 IVDAIAAGDPAAAQAALREHLSGTLAQLEEIRQRFPHYV 234 ++DAIAA DP AQ LREHLSGTL+Q+ EI +R+P YV Sbjct: 188 LLDAIAAQDPQRAQQVLREHLSGTLSQVAEICKRYPEYV 226