BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0374.p (142 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774593.1| biopolymer transport ExbD-related transmembr... 287 5e-76 ref|YP_004751874.1| biopolymer transport protein ExbD/TolR [Coll... 202 1e-50 ref|ZP_08275301.1| Biopolymer transport protein ExbD/TolR [Oxalo... 201 4e-50 ref|YP_001354270.1| biopolymer transport protein ExbD [Janthinob... 191 4e-47 ref|YP_001100740.1| putative iopolymer transport ExbD2 protein [... 187 4e-46 gb|EGW61710.1| Biopolymer transport protein ExbD/TolR [Dechloros... 161 2e-38 ref|YP_286409.1| biopolymer transport protein ExbD/TolR [Dechlor... 160 4e-38 ref|ZP_04580038.1| biopolymer transporter [Oxalobacter formigene... 159 1e-37 ref|YP_411723.1| biopolymer transport protein ExbD/TolR [Nitroso... 155 1e-36 ref|YP_582691.1| biopolymer transport protein [Cupriavidus metal... 155 3e-36 >ref|YP_003774593.1| biopolymer transport ExbD-related transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62685.1| biopolymer transport ExbD-related transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 142 Score = 287 bits (734), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 142/142 (100%), Positives = 142/142 (100%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE Sbjct: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN Sbjct: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 Query: 121 VLEAARMAGYPKVTFAAQASSK 142 VLEAARMAGYPKVTFAAQASSK Sbjct: 121 VLEAARMAGYPKVTFAAQASSK 142 >ref|YP_004751874.1| biopolymer transport protein ExbD/TolR [Collimonas fungivorans Ter331] gb|AEK61051.1| Biopolymer transport protein ExbD/TolR [Collimonas fungivorans Ter331] Length = 143 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/141 (68%), Positives = 121/141 (85%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFRKG+ R+D EINLIPFIDVLLVIVIFLMVTT+YSKFTALQ+TLPTADA KA+ QP E Sbjct: 1 MNFRKGKGRDDPEINLIPFIDVLLVIVIFLMVTTSYSKFTALQITLPTADADKAMVQPQE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 +N+AV G+YA+NN ++S++DA L+ +++ V+A +K DPV+IINADA+ATHQTV+N Sbjct: 61 INVAVSPQGQYAVNNVQVSSKDAASLALDLKNAVQADGAKGDPVVIINADAMATHQTVIN 120 Query: 121 VLEAARMAGYPKVTFAAQASS 141 VLEAAR+AG+ K+TFAAQ S Sbjct: 121 VLEAARLAGFDKITFAAQTSG 141 >ref|ZP_08275301.1| Biopolymer transport protein ExbD/TolR [Oxalobacteraceae bacterium IMCC9480] gb|EGF31230.1| Biopolymer transport protein ExbD/TolR [Oxalobacteraceae bacterium IMCC9480] Length = 145 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 94/143 (65%), Positives = 121/143 (84%), Gaps = 2/143 (1%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFR+ + RED EINLIPFIDVLLVI+IFLMV+TTYSKFT LQ+TLPTADA KA+E+PFE Sbjct: 1 MNFRRRKGREDPEINLIPFIDVLLVILIFLMVSTTYSKFTELQITLPTADAEKAVERPFE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKL--DPVIIINADALATHQTV 118 +N+ VD+ GRYA+NN ++S RD +GL++EM+ S+L DP++IINAD ATHQ+V Sbjct: 61 INVMVDSQGRYAVNNVQVSFRDVRGLADEMRNAASGKGSELRKDPIVIINADGTATHQSV 120 Query: 119 VNVLEAARMAGYPKVTFAAQASS 141 +NVLEAAR+AG+ +VTFAAQ++S Sbjct: 121 INVLEAARLAGFERVTFAAQSAS 143 >ref|YP_001354270.1| biopolymer transport protein ExbD [Janthinobacterium sp. Marseille] gb|ABR90384.1| biopolymer transport protein ExbD [Janthinobacterium sp. Marseille] Length = 144 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 99/143 (69%), Positives = 120/143 (83%), Gaps = 1/143 (0%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFRKG+ RED EINLI FIDVLLVI+IFLMV+T+YSKFTALQ+TLPTADA KA+++PFE Sbjct: 1 MNFRKGQGREDPEINLIAFIDVLLVILIFLMVSTSYSKFTALQITLPTADAEKAMDRPFE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASA-SKLDPVIIINADALATHQTVV 119 +N+ VD GRY++NN RI+ ++ + L+ E+ A V AS + DPVIII ADA ATHQTV+ Sbjct: 61 INVGVDTQGRYSINNTRIAVQNPEALAAELTAAVAASGKTNTDPVIIIAADATATHQTVI 120 Query: 120 NVLEAARMAGYPKVTFAAQASSK 142 NVLEAAR+AGYPKVTFAAQ S K Sbjct: 121 NVLEAARIAGYPKVTFAAQTSGK 143 >ref|YP_001100740.1| putative iopolymer transport ExbD2 protein [Herminiimonas arsenicoxydans] emb|CAL62619.1| Biopolymer transport protein [Herminiimonas arsenicoxydans] Length = 144 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 97/143 (67%), Positives = 121/143 (84%), Gaps = 1/143 (0%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFRKG+ RED EINLI FIDVLLVI+IFLMV+T+YSKFTALQ+TLPTADA KA+E+PFE Sbjct: 1 MNFRKGQGREDPEINLIAFIDVLLVILIFLMVSTSYSKFTALQITLPTADAEKAMERPFE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASA-SKLDPVIIINADALATHQTVV 119 +N+ VDA GRYA+NN R++ ++ + L+EE+ A AS + +DPV+II A+A ATHQ+V+ Sbjct: 61 INVIVDAQGRYAINNTRVAVQNPEALAEELTAAATASGKANVDPVVIIAAEATATHQSVI 120 Query: 120 NVLEAARMAGYPKVTFAAQASSK 142 NVLEAAR+AGY KVTFAAQA K Sbjct: 121 NVLEAARIAGYSKVTFAAQAGGK 143 >gb|EGW61710.1| Biopolymer transport protein ExbD/TolR [Dechlorosoma suillum PS] Length = 139 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/142 (55%), Positives = 110/142 (77%), Gaps = 3/142 (2%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 M FR+GR RE+ EINLIP IDVLLVI+IFLM+TTTY+KF+ L++ LPTAD+ + EQP E Sbjct: 1 MQFRQGRHREEPEINLIPLIDVLLVIIIFLMLTTTYAKFSGLEINLPTADSSQNPEQPQE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 +++AV A+G+ +N +S D ++E A+ RA+ S+ DPVI+INADA ATHQ+VV+ Sbjct: 61 VSVAVTASGQVLVNKSPLSTPDVPVIAE---ALRRAAGSQKDPVIVINADAKATHQSVVD 117 Query: 121 VLEAARMAGYPKVTFAAQASSK 142 V++AA+ AGYP+++FA QA K Sbjct: 118 VMQAAQSAGYPRISFATQAPQK 139 >ref|YP_286409.1| biopolymer transport protein ExbD/TolR [Dechloromonas aromatica RCB] gb|AAZ47939.1| Biopolymer transport protein ExbD/TolR [Dechloromonas aromatica RCB] Length = 137 Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 75/138 (54%), Positives = 109/138 (78%), Gaps = 3/138 (2%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNF++GR RE+ EINLIP IDVLLVI+IFLM+TTTY+KF+ L++ LPTADA K EQP E Sbjct: 1 MNFQRGRSREEPEINLIPMIDVLLVIIIFLMLTTTYAKFSGLEINLPTADASKQAEQPNE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 +++AV A+G+ +N ++ D + +++ ++ RA+ S+ DP+I+INADA ATHQ+VV+ Sbjct: 61 VDVAVTASGQVLVNKSPLATTDVKSIADGLR---RAAGSREDPLIVINADAKATHQSVVD 117 Query: 121 VLEAARMAGYPKVTFAAQ 138 V++AA+ AGYP ++FA Q Sbjct: 118 VMQAAQTAGYPHISFATQ 135 >ref|ZP_04580038.1| biopolymer transporter [Oxalobacter formigenes OXCC13] gb|EEO31011.1| biopolymer transporter [Oxalobacter formigenes OXCC13] Length = 144 Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/142 (55%), Positives = 104/142 (73%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNFR+G+ E EINLIPFIDVLLVI+IFLMVTTTYSKF+ LQ+TLP A+A K+ ++ E Sbjct: 3 MNFRRGKNHEQPEINLIPFIDVLLVILIFLMVTTTYSKFSELQITLPVANAEKSPQRMLE 62 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 LN++VDA G +A+NN+RI L+ EMQ V + PV+II+AD A HQ V++ Sbjct: 63 LNVSVDAKGDFAINNERIPYVSPSQLASEMQKRVPKTDDGKGPVVIISADGAARHQNVIH 122 Query: 121 VLEAARMAGYPKVTFAAQASSK 142 +LEAAR+AG ++TFA Q S+ Sbjct: 123 ILEAARLAGLDRLTFATQVKSE 144 >ref|YP_411723.1| biopolymer transport protein ExbD/TolR [Nitrosospira multiformis ATCC 25196] gb|ABB74331.1| Biopolymer transport protein ExbD/TolR [Nitrosospira multiformis ATCC 25196] Length = 138 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 74/138 (53%), Positives = 105/138 (76%), Gaps = 3/138 (2%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 MNF++GR +E+ EINL+P IDVLLVI+IFLM+TTTYSKF+ L++TLP A + K+ EQ Sbjct: 1 MNFQRGRNKEEPEINLVPMIDVLLVILIFLMITTTYSKFSELEITLPQASSEKSSEQSNV 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 ++I+V A G Y +N + R+ L EE+++ A+ S++DPVI+INADA ATHQ+V+ Sbjct: 61 IDISVSATGNYMINRMPLQFRNVVQLQEELRS---AAGSRVDPVIVINADAQATHQSVIT 117 Query: 121 VLEAARMAGYPKVTFAAQ 138 V+EAARMAGY ++TF + Sbjct: 118 VMEAARMAGYNRITFTTR 135 >ref|YP_582691.1| biopolymer transport protein [Cupriavidus metallidurans CH34] gb|ABF07422.1| biopolymer transport protein [Cupriavidus metallidurans CH34] Length = 143 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 73/142 (51%), Positives = 107/142 (75%) Query: 1 MNFRKGRPREDLEINLIPFIDVLLVIVIFLMVTTTYSKFTALQLTLPTADAPKALEQPFE 60 M+FR + RE+ EINLIP IDVLLVI+IFLM+TTTYS+FT LQ+ LPTADA +A ++P E Sbjct: 1 MHFRSRQRREEPEINLIPLIDVLLVILIFLMITTTYSRFTELQIQLPTADAERAQQRPTE 60 Query: 61 LNIAVDANGRYALNNKRISARDAQGLSEEMQAVVRASASKLDPVIIINADALATHQTVVN 120 + ++V A G Y++N + + D L++++++ +++ PV+I+NADA ATHQ V+N Sbjct: 61 IVVSVSARGIYSVNKQVLEQTDVTSLADQLRSAAGPASNGQPPVVIVNADAQATHQAVIN 120 Query: 121 VLEAARMAGYPKVTFAAQASSK 142 V+EAAR+AG ++TFA Q+S K Sbjct: 121 VMEAARLAGLSRLTFATQSSQK 142