BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0340.p (179 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773560.1| 50S ribosomal protein L5 [Herbaspirillum ser... 363 5e-99 ref|YP_004751073.1| 50S ribosomal protein L5p (L11e) [Collimonas... 352 1e-95 ref|YP_001355089.1| large subunit ribosomal protein L5 [Janthino... 349 1e-94 ref|YP_001101384.1| 50S ribosomal protein L5 [Herminiimonas arse... 347 5e-94 ref|ZP_04580007.1| large subunit ribosomal protein L5 [Oxalobact... 330 7e-89 ref|NP_882137.1| 50S ribosomal protein L5 [Bordetella pertussis ... 329 1e-88 ref|YP_004418043.1| 50S ribosomal protein L5 [Pusillimonas sp. T... 328 2e-88 emb|CBJ36596.1| 50S ribosomal subunit protein L5 [Ralstonia sola... 326 9e-88 ref|ZP_04577857.1| 50S ribosomal subunit protein L5 [Oxalobacter... 326 1e-87 ref|YP_001578453.1| 50S ribosomal protein L5 [Burkholderia multi... 325 1e-87 >ref|YP_003773560.1| 50S ribosomal protein L5 [Herbaspirillum seropedicae SmR1] gb|ADJ61652.1| 50S ribosomal subunit L5 protein [Herbaspirillum seropedicae SmR1] Length = 179 Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 179/179 (100%), Positives = 179/179 (100%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI Sbjct: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >ref|YP_004751073.1| 50S ribosomal protein L5p (L11e) [Collimonas fungivorans Ter331] gb|AEK60250.1| LSU ribosomal protein L5p (L11e) [Collimonas fungivorans Ter331] Length = 179 Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 171/179 (95%), Positives = 176/179 (98%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYKDKVV DLT KY+YKSVMEVPRILKITLNMGLSEA+ADKKIIEHAVGDLTKI Sbjct: 1 MARLQEFYKDKVVTDLTAKYAYKSVMEVPRILKITLNMGLSEAIADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGA+MYEFLDRLITVALPRVRDFRGVSGR Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGAQMYEFLDRLITVALPRVRDFRGVSGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKID LRGMNISITTTAKTDDEAK+LLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDVLRGMNISITTTAKTDDEAKSLLAAFKFPFRN 179 >ref|YP_001355089.1| large subunit ribosomal protein L5 [Janthinobacterium sp. Marseille] sp|A6T3J2.1|RL5_JANMA RecName: Full=50S ribosomal protein L5 gb|ABR88635.1| large subunit ribosomal protein L5 [Janthinobacterium sp. Marseille] Length = 179 Score = 349 bits (895), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 170/179 (94%), Positives = 175/179 (97%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV DLT K++YKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI Sbjct: 1 MARLQEFYKEKVVGDLTAKFAYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGA MYEFLDR ITVALPRVRDFRGVSG+ Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGAHMYEFLDRFITVALPRVRDFRGVSGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >ref|YP_001101384.1| 50S ribosomal protein L5 [Herminiimonas arsenicoxydans] sp|A4G9S6.1|RL5_HERAR RecName: Full=50S ribosomal protein L5 emb|CAL63263.1| 50S ribosomal subunit protein L5 [Herminiimonas arsenicoxydans] Length = 179 Score = 347 bits (889), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 167/179 (93%), Positives = 175/179 (97%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV DLT K++YKS MEVPRILKITLNMGLSEA+ADKKIIEHAVGDLTKI Sbjct: 1 MARLQEFYKEKVVGDLTAKFAYKSAMEVPRILKITLNMGLSEAIADKKIIEHAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGA+MYEFLDR ITVALPRVRDFRG+SG+ Sbjct: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGAQMYEFLDRFITVALPRVRDFRGISGK 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 >ref|ZP_04580007.1| large subunit ribosomal protein L5 [Oxalobacter formigenes OXCC13] gb|EEO30980.1| large subunit ribosomal protein L5 [Oxalobacter formigenes OXCC13] Length = 179 Score = 330 bits (845), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 154/179 (86%), Positives = 173/179 (96%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVVADL K+SYKS MEVPRI KITLNMGLSEAVADKK+I+HA GDL KI Sbjct: 1 MARLQEFYKEKVVADLMAKFSYKSAMEVPRITKITLNMGLSEAVADKKVIDHATGDLGKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARK+IAGFKIR+GYPIGCMVTLRGA+MYEFLDRL+T+ALPRVRDFRGV+GR Sbjct: 61 AGQKPVVTKARKSIAGFKIRDGYPIGCMVTLRGAKMYEFLDRLVTIALPRVRDFRGVNGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNYN+G+KEQIIFPEIEY+KIDALRG+NISITTTAKTD+E+KALL+AFKFPFRN Sbjct: 121 SFDGRGNYNLGIKEQIIFPEIEYEKIDALRGLNISITTTAKTDEESKALLSAFKFPFRN 179 >ref|NP_882137.1| 50S ribosomal protein L5 [Bordetella pertussis Tohama I] ref|NP_882407.1| 50S ribosomal protein L5 [Bordetella parapertussis 12822] ref|NP_886596.1| 50S ribosomal protein L5 [Bordetella bronchiseptica RB50] sp|Q7VTB9.1|RL5_BORPE RecName: Full=50S ribosomal protein L5 sp|Q7W2E3.1|RL5_BORPA RecName: Full=50S ribosomal protein L5 sp|Q7WRB1.1|RL5_BORBR RecName: Full=50S ribosomal protein L5 emb|CAE43885.1| 50S ribosomal protein L5 [Bordetella pertussis Tohama I] emb|CAE39784.1| 50S ribosomal protein L5 [Bordetella parapertussis] emb|CAE30545.1| 50S ribosomal protein L5 [Bordetella bronchiseptica RB50] gb|AEE68751.1| 50S ribosomal protein L5 [Bordetella pertussis CS] Length = 179 Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 157/179 (87%), Positives = 166/179 (92%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 M+RLQ+FYK KVVADL K+ YK VMEVPRI KITLNMG+SEAVADKK+IEHAV DLTKI Sbjct: 1 MSRLQEFYKSKVVADLQAKFGYKCVMEVPRITKITLNMGVSEAVADKKVIEHAVSDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 +GQKPVVTK RKAIAGFKIRE YPIGCMVTLRG RMYEFLDRL+ VALPRVRDFRG+SGR Sbjct: 61 SGQKPVVTKTRKAIAGFKIRENYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAKTDDEAKALL AF FPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKTDDEAKALLTAFSFPFRN 179 >ref|YP_004418043.1| 50S ribosomal protein L5 [Pusillimonas sp. T7-7] gb|AEC21419.1| 50S ribosomal protein L5 [Pusillimonas sp. T7-7] Length = 179 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 156/179 (87%), Positives = 167/179 (93%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FY+ KV+ADL K+ YKSVMEVPRI KITLNMG+SEAVADKK+IEHAV DLTKI Sbjct: 1 MARLQEFYRSKVMADLQAKFGYKSVMEVPRITKITLNMGVSEAVADKKVIEHAVSDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTK RKAIAGFKIRE YPIGCMVTLRG RMYEFLDRL+ VALPRVRDFRG+SGR Sbjct: 61 AGQKPVVTKTRKAIAGFKIREDYPIGCMVTLRGQRMYEFLDRLVAVALPRVRDFRGISGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYN+GVKEQIIFPEIEYDKIDA+RGMNISI TTAKTDDEAKALL+AF FPFRN Sbjct: 121 AFDGRGNYNVGVKEQIIFPEIEYDKIDAVRGMNISIITTAKTDDEAKALLSAFSFPFRN 179 >emb|CBJ36596.1| 50S ribosomal subunit protein L5 [Ralstonia solanacearum CMR15] Length = 190 Score = 326 bits (836), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 157/178 (88%), Positives = 168/178 (94%) Query: 2 ARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIA 61 ARLQ+FYK+KVVA+L ++ YKSVMEVPRI KITLNMGL EAV DKK+IEHA GDLTKIA Sbjct: 13 ARLQEFYKEKVVAELIKQFGYKSVMEVPRITKITLNMGLGEAVNDKKVIEHATGDLTKIA 72 Query: 62 GQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGRA 121 GQKPVVTKARKAIAGFKIR+GYPIG MVTLRG RMYEFLDR ITV+LPRVRDFRGVSGRA Sbjct: 73 GQKPVVTKARKAIAGFKIRQGYPIGTMVTLRGQRMYEFLDRFITVSLPRVRDFRGVSGRA 132 Query: 122 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 FDGRGNYNIGVKEQIIFPEIEYDKIDALRG+NISITTTAK+D+EAKALLAAFKFPFRN Sbjct: 133 FDGRGNYNIGVKEQIIFPEIEYDKIDALRGLNISITTTAKSDEEAKALLAAFKFPFRN 190 >ref|ZP_04577857.1| 50S ribosomal subunit protein L5 [Oxalobacter formigenes HOxBLS] gb|EEO28819.1| 50S ribosomal subunit protein L5 [Oxalobacter formigenes HOxBLS] Length = 179 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 150/179 (83%), Positives = 170/179 (94%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+ YK+K+V DL K+SYKS MEVPRI KITLNMGLSEAVADKK+I+HA DL KI Sbjct: 1 MARLQELYKEKIVPDLMAKFSYKSAMEVPRITKITLNMGLSEAVADKKVIDHATSDLAKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARK+IAGFKIREGYPIGCMVTLRGARMYEFLDRL+T+ALPRVRDFRG++GR Sbjct: 61 AGQKPVVTKARKSIAGFKIREGYPIGCMVTLRGARMYEFLDRLVTIALPRVRDFRGINGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 +FDGRGNYN+G++EQIIFPE+EYDKIDALRG+NISITTTAKTD+E+KALL+AFKFPFRN Sbjct: 121 SFDGRGNYNLGIREQIIFPEVEYDKIDALRGLNISITTTAKTDEESKALLSAFKFPFRN 179 >ref|YP_001578453.1| 50S ribosomal protein L5 [Burkholderia multivorans ATCC 17616] ref|YP_001947414.1| 50S ribosomal protein L5 [Burkholderia multivorans ATCC 17616] ref|ZP_03574615.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD2M] ref|ZP_03580358.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD2] ref|ZP_03586461.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD1] ref|ZP_04946823.1| Ribosomal protein L5 [Burkholderia dolosa AUO158] sp|A9ADK5.1|RL5_BURM1 RecName: Full=50S ribosomal protein L5 gb|EAY69994.1| Ribosomal protein L5 [Burkholderia dolosa AUO158] gb|ABX13956.1| ribosomal protein L5 [Burkholderia multivorans ATCC 17616] dbj|BAG44878.1| large subunit ribosomal protein L5 [Burkholderia multivorans ATCC 17616] gb|EED99409.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD1] gb|EEE05373.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD2] gb|EEE10802.1| 50S ribosomal protein L5 [Burkholderia multivorans CGD2M] Length = 179 Score = 325 bits (834), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 160/179 (89%), Positives = 169/179 (94%) Query: 1 MARLQQFYKDKVVADLTTKYSYKSVMEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKI 60 MARLQ+FYK+KVV L K+ YKSVMEVPRI KITLNMGL EAVADKKIIE+AVGDLTKI Sbjct: 1 MARLQEFYKEKVVPGLIEKFGYKSVMEVPRITKITLNMGLGEAVADKKIIENAVGDLTKI 60 Query: 61 AGQKPVVTKARKAIAGFKIREGYPIGCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGR 120 AGQKPVVTKARKAIAGFKIR+GYPIG MVTLRG MYEFLDRL+TVALPRVRDFRGVSGR Sbjct: 61 AGQKPVVTKARKAIAGFKIRQGYPIGAMVTLRGRAMYEFLDRLVTVALPRVRDFRGVSGR 120 Query: 121 AFDGRGNYNIGVKEQIIFPEIEYDKIDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179 AFDGRGNYNIGVKEQIIFPEI+YDKIDALRG+NISITTTAKTDDEAKALLA+FKFPFRN Sbjct: 121 AFDGRGNYNIGVKEQIIFPEIDYDKIDALRGLNISITTTAKTDDEAKALLASFKFPFRN 179