BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0338.p (131 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773562.1| 30S ribosomal protein S8 [Herbaspirillum ser... 261 3e-68 ref|YP_001355087.1| small subunit ribosomal protein S8 [Janthino... 245 2e-63 ref|YP_001101382.1| 30S ribosomal protein S8 [Herminiimonas arse... 242 1e-62 ref|YP_004751075.1| 30S ribosomal protein S8p (S15Ae) [Collimona... 241 3e-62 ref|YP_585444.1| 30S ribosomal protein S8 [Cupriavidus metallidu... 226 9e-58 ref|YP_297369.1| 30S ribosomal protein S8 [Ralstonia eutropha JM... 224 2e-57 ref|NP_521126.1| 30S ribosomal protein S8 [Ralstonia solanacearu... 224 3e-57 ref|ZP_00945190.1| SSU ribosomal protein S8P [Ralstonia solanace... 224 3e-57 ref|YP_001859043.1| 30S ribosomal protein S8 [Burkholderia phyma... 224 4e-57 gb|EGD06555.1| 30S ribosomal protein S8 [Burkholderia sp. TJI49] 224 4e-57 >ref|YP_003773562.1| 30S ribosomal protein S8 [Herbaspirillum seropedicae SmR1] gb|ADJ61654.1| 30S ribosomal subunit S8 protein [Herbaspirillum seropedicae SmR1] Length = 131 Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL Sbjct: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT Sbjct: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|YP_001355087.1| small subunit ribosomal protein S8 [Janthinobacterium sp. Marseille] sp|A6T3J0.1|RS8_JANMA RecName: Full=30S ribosomal protein S8 gb|ABR89087.1| small subunit ribosomal protein S8 [Janthinobacterium sp. Marseille] Length = 131 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/131 (93%), Positives = 125/131 (95%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V KT+V MPSSKVK+AIANVLKDEGYIEDFAV A GKAEL Sbjct: 1 MSMSDPIADMLTRIRNAQVVQKTSVAMPSSKVKIAIANVLKDEGYIEDFAVTEAAGKAEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTP+GVMTDRKARAT Sbjct: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPKGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|YP_001101382.1| 30S ribosomal protein S8 [Herminiimonas arsenicoxydans] sp|A4G9S4.1|RS8_HERAR RecName: Full=30S ribosomal protein S8 emb|CAL63261.1| 30S ribosomal protein S8 [Herminiimonas arsenicoxydans] Length = 131 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/131 (91%), Positives = 125/131 (95%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V KT+V MPSSKVK+AIANVLKDEGYIED+AV A GKAEL Sbjct: 1 MSMSDPIADMLTRIRNAQVVQKTSVAMPSSKVKIAIANVLKDEGYIEDYAVTEAAGKAEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 KIGLKYYAGRPVIERLERVSRPGLR+YKGKDDIPNVMNGLGVAIVSTP+GVMTDRKARAT Sbjct: 61 KIGLKYYAGRPVIERLERVSRPGLRVYKGKDDIPNVMNGLGVAIVSTPKGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|YP_004751075.1| 30S ribosomal protein S8p (S15Ae) [Collimonas fungivorans Ter331] gb|AEK60252.1| SSU ribosomal protein S8p (S15Ae) [Collimonas fungivorans Ter331] Length = 131 Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 120/131 (91%), Positives = 124/131 (94%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V+KTTV MPSSKVK+AIANVLKDEGYIEDFAV GKAEL Sbjct: 1 MSMSDPIADMLTRIRNAQVVHKTTVAMPSSKVKIAIANVLKDEGYIEDFAVAEEGGKAEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 KIGLKYYAGRPVIERL+RVSRPGLRIYKGKDDIPNVMNGLGVAI+STP GVMTDRKARAT Sbjct: 61 KIGLKYYAGRPVIERLDRVSRPGLRIYKGKDDIPNVMNGLGVAIISTPAGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|YP_585444.1| 30S ribosomal protein S8 [Cupriavidus metallidurans CH34] sp|Q1LI51.1|RS8_RALME RecName: Full=30S ribosomal protein S8 gb|ABF10175.1| 30S ribosomal subunit protein S8 [Cupriavidus metallidurans CH34] Length = 131 Score = 226 bits (576), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 107/131 (81%), Positives = 121/131 (92%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQGV K +VVMPSSK+K AIA VLKDEGY+EDF+V GKA+L Sbjct: 1 MSMSDPIADMLTRIRNAQGVQKASVVMPSSKLKAAIAKVLKDEGYVEDFSVQEEGGKAQL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 IGLKYYAGRPVIER+ERVS+PGLR+YKG+ DIP+VMNGLGVAI+STP+G+MTDRKARAT Sbjct: 61 TIGLKYYAGRPVIERIERVSKPGLRVYKGRSDIPHVMNGLGVAIISTPQGLMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEV+CYVA Sbjct: 121 GVGGEVLCYVA 131 >ref|YP_297369.1| 30S ribosomal protein S8 [Ralstonia eutropha JMP134] ref|YP_727906.1| 30S ribosomal protein S8 [Ralstonia eutropha H16] ref|YP_002006915.1| 30S ribosomal protein s8 [Cupriavidus taiwanensis LMG 19424] ref|YP_004687195.1| 30S ribosomal protein S8 [Cupriavidus necator N-1] sp|Q0K633.1|RS8_RALEH RecName: Full=30S ribosomal protein S8 sp|Q46WF8.1|RS8_RALEJ RecName: Full=30S ribosomal protein S8 sp|B3R7F4.1|RS8_CUPTR RecName: Full=30S ribosomal protein S8 gb|AAZ62525.1| SSU ribosomal protein S8P [Ralstonia eutropha JMP134] emb|CAJ94538.1| SSU ribosomal protein S8 [Ralstonia eutropha H16] emb|CAQ70854.1| 30S ribosomal subunit protein S8 [Cupriavidus taiwanensis LMG 19424] gb|AEI78714.1| 30S ribosomal protein S8 [Cupriavidus necator N-1] Length = 131 Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 108/131 (82%), Positives = 121/131 (92%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQGV K +VVMPSSK+KVAIA VLKDEGYI+D+AV GKA+L Sbjct: 1 MSMSDPIADMLTRIRNAQGVQKASVVMPSSKLKVAIAKVLKDEGYIDDYAVQEDGGKAQL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 IGLKYYAGRPVIER+ERVS+PGLR+YKG+ DIP VMNGLGVAI+STP+G+MTDRKARAT Sbjct: 61 SIGLKYYAGRPVIERIERVSKPGLRVYKGRSDIPQVMNGLGVAIISTPQGLMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEV+CYVA Sbjct: 121 GVGGEVLCYVA 131 >ref|NP_521126.1| 30S ribosomal protein S8 [Ralstonia solanacearum GMI1000] sp|Q8XV26.1|RS8_RALSO RecName: Full=30S ribosomal protein S8 emb|CAD16714.1| probable 30s ribosomal protein s8 [Ralstonia solanacearum GMI1000] Length = 131 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 108/131 (82%), Positives = 120/131 (91%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V K +VVMPSSK+KVAIA VLKDEGYI+DFAV GKA L Sbjct: 1 MSMSDPIADMLTRIRNAQAVEKASVVMPSSKLKVAIAKVLKDEGYIDDFAVTEQGGKASL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 IGLKYYAGRPVIERLERVS+PGLR+YKG+++IP VMNGLGVAI+STP+G+MTDR+ARAT Sbjct: 61 TIGLKYYAGRPVIERLERVSKPGLRVYKGRNEIPQVMNGLGVAIISTPQGLMTDRRARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|ZP_00945190.1| SSU ribosomal protein S8P [Ralstonia solanacearum UW551] ref|YP_003744395.1| 30S ribosomal protein S8 [Ralstonia solanacearum CFBP2957] gb|EAP72282.1| SSU ribosomal protein S8P [Ralstonia solanacearum UW551] emb|CAQ17635.1| 30s ribosomal protein s8 [Ralstonia solanacearum MolK2] emb|CBJ41751.1| 30S ribosomal subunit protein S8 [Ralstonia solanacearum CFBP2957] gb|AEG67794.1| 30S ribosomal protein S8 [Ralstonia solanacearum Po82] Length = 131 Score = 224 bits (571), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 108/131 (82%), Positives = 120/131 (91%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V K +VVMPSSK+KVAIA VLKDEGYI++FAV GKA L Sbjct: 1 MSMSDPIADMLTRIRNAQAVEKASVVMPSSKLKVAIAKVLKDEGYIDEFAVTEQGGKATL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 IGLKYYAGRPVIERL+RVSRPGLR+YKG+++IP VMNGLGVAI+STP+G+MTDRKARAT Sbjct: 61 TIGLKYYAGRPVIERLQRVSRPGLRVYKGRNEIPQVMNGLGVAIISTPQGLMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >ref|YP_001859043.1| 30S ribosomal protein S8 [Burkholderia phymatum STM815] sp|B2JI51.1|RS8_BURP8 RecName: Full=30S ribosomal protein S8 gb|ACC71997.1| ribosomal protein S8 [Burkholderia phymatum STM815] Length = 131 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/131 (83%), Positives = 119/131 (90%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V K +V MPSSKVKVAIA VLKDEGYI+DFAV A K+EL Sbjct: 1 MSMSDPIADMLTRIRNAQMVEKVSVTMPSSKVKVAIAQVLKDEGYIDDFAVKAEGAKSEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 I LKYYAGRPVIERLERVS+PGLR+Y+G++DIP VMNGLGVAIVSTP+GVMTDRKARAT Sbjct: 61 NIALKYYAGRPVIERLERVSKPGLRVYRGRNDIPQVMNGLGVAIVSTPKGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131 >gb|EGD06555.1| 30S ribosomal protein S8 [Burkholderia sp. TJI49] Length = 131 Score = 224 bits (570), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 110/131 (83%), Positives = 119/131 (90%) Query: 1 MSMSDPIADMLTRIRNAQGVNKTTVVMPSSKVKVAIANVLKDEGYIEDFAVVAADGKAEL 60 MSMSDPIADMLTRIRNAQ V K +V MPSSKVKVAIA VLKDEGYI+DFAV + KAEL Sbjct: 1 MSMSDPIADMLTRIRNAQMVEKVSVAMPSSKVKVAIAQVLKDEGYIDDFAVKSEGAKAEL 60 Query: 61 KIGLKYYAGRPVIERLERVSRPGLRIYKGKDDIPNVMNGLGVAIVSTPRGVMTDRKARAT 120 I LKYYAGRPVIERLERVS+PGLR+Y+G++DIP VMNGLGVAIVSTP+GVMTDRKARAT Sbjct: 61 NIALKYYAGRPVIERLERVSKPGLRVYRGRNDIPQVMNGLGVAIVSTPKGVMTDRKARAT 120 Query: 121 GVGGEVICYVA 131 GVGGEVICYVA Sbjct: 121 GVGGEVICYVA 131