BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0335.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773565.1| 30S ribosomal protein S5 [Herbaspirillum ser... 340 6e-92 ref|YP_001355084.1| 30S ribosomal protein S5 [Janthinobacterium ... 323 7e-87 ref|YP_001101379.1| 30S ribosomal protein S5 [Herminiimonas arse... 321 2e-86 ref|YP_004751078.1| 30S ribosomal protein S5p (S2e) [Collimonas ... 321 2e-86 ref|ZP_08274151.1| SSU ribosomal protein S5p (S2e) [Oxalobactera... 313 4e-84 ref|YP_001154856.1| 30S ribosomal protein S5 [Polynucleobacter n... 302 1e-80 ref|ZP_04577862.1| small subunit ribosomal protein S5 [Oxalobact... 299 1e-79 ref|ZP_04580012.1| small subunit ribosomal protein S5 [Oxalobact... 298 2e-79 ref|YP_001797009.1| 30S ribosomal protein S5 [Polynucleobacter n... 296 9e-79 ref|YP_585441.1| 30S ribosomal protein S5 [Cupriavidus metallidu... 294 3e-78 >ref|YP_003773565.1| 30S ribosomal protein S5 [Herbaspirillum seropedicae SmR1] gb|ADJ61657.1| 30S ribosomal subunit S5 protein [Herbaspirillum seropedicae SmR1] Length = 172 Score = 340 bits (871), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 172/172 (100%), Positives = 172/172 (100%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 >ref|YP_001355084.1| 30S ribosomal protein S5 [Janthinobacterium sp. Marseille] sp|A6T3I7.1|RS5_JANMA RecName: Full=30S ribosomal protein S5 gb|ABR88390.1| small subunit ribosomal protein S5 [Janthinobacterium sp. Marseille] Length = 172 Score = 323 bits (827), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 162/172 (94%), Positives = 168/172 (97%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQSK QSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARRK+IKVTLKNGT+QHTV GKHGASSV++ PAKDGTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMLPAKDGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 FEVMGVTNVVAKSTGSTNPYNMVRATLDGL+KMNT +EIAAKRGKSVEEILG Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLAKMNTASEIAAKRGKSVEEILG 172 >ref|YP_001101379.1| 30S ribosomal protein S5 [Herminiimonas arsenicoxydans] sp|A4G9S1.1|RS5_HERAR RecName: Full=30S ribosomal protein S5 emb|CAL63258.1| 30S ribosomal subunit protein S5 [Herminiimonas arsenicoxydans] Length = 172 Score = 321 bits (823), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 160/172 (93%), Positives = 169/172 (98%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQSK QS+KPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQSKMQSEKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARRK+IKVTLKNGT+QHTV GKHGASSV++ PAK+GTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMLPAKEGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 FEVMGVTNVVAKSTGSTNPYNMVRATL+GL+KMNTP+EIAAKRGKSVEEILG Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLEGLAKMNTPSEIAAKRGKSVEEILG 172 >ref|YP_004751078.1| 30S ribosomal protein S5p (S2e) [Collimonas fungivorans Ter331] gb|AEK60255.1| SSU ribosomal protein S5p (S2e) [Collimonas fungivorans Ter331] Length = 172 Score = 321 bits (823), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 160/172 (93%), Positives = 168/172 (97%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQSK QSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARRK+IKVTLKNGT+QH + GKHGASSV++ PAKDGTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMEEARRKMIKVTLKNGTLQHAISGKHGASSVLMLPAKDGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 FEV+GVTNVVAKSTGSTNPYNMVRATL+GLSKMNTP+EIAAKRGKSVEEILG Sbjct: 121 FEVLGVTNVVAKSTGSTNPYNMVRATLNGLSKMNTPSEIAAKRGKSVEEILG 172 >ref|ZP_08274151.1| SSU ribosomal protein S5p (S2e) [Oxalobacteraceae bacterium IMCC9480] gb|EGF32381.1| SSU ribosomal protein S5p (S2e) [Oxalobacteraceae bacterium IMCC9480] Length = 172 Score = 313 bits (803), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 155/171 (90%), Positives = 168/171 (98%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQSK QS+KPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDG+GRIGMGKGKSK Sbjct: 1 MAKMQSKMQSEKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGEGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARRK+IKVTLKNGT+QHTV GKHGASSV+++PAK+GTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMAPAKEGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEIL 171 FEVMGVTNVVAKS GSTNPYNMVRATL+GL+KMNTP++IAAKRGKSVE+IL Sbjct: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLNGLAKMNTPSDIAAKRGKSVEDIL 171 >ref|YP_001154856.1| 30S ribosomal protein S5 [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] sp|A4SUX8.1|RS5_POLSQ RecName: Full=30S ribosomal protein S5 gb|ABP33292.1| SSU ribosomal protein S5P [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 172 Score = 302 bits (773), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 148/172 (86%), Positives = 165/172 (95%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQ+K Q+++ DDG+REKMIAVNRVTKVVKGGRI+GFAAL VVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQTKMQNEERDDGLREKMIAVNRVTKVVKGGRILGFAALTVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAM+EARRK+IKVTL+ GT+QHTV G+HGAS V+ISPAKDGTG+IAGGPMRAI Sbjct: 61 EVPVAVQKAMDEARRKMIKVTLRKGTLQHTVTGQHGASRVLISPAKDGTGIIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 F+VMGVTNVVAKS GSTNPYN+VRAT+DGLSKM+TPAEIAAKRGKSVEEILG Sbjct: 121 FDVMGVTNVVAKSLGSTNPYNLVRATIDGLSKMSTPAEIAAKRGKSVEEILG 172 >ref|ZP_04577862.1| small subunit ribosomal protein S5 [Oxalobacter formigenes HOxBLS] gb|EEO28824.1| small subunit ribosomal protein S5 [Oxalobacter formigenes HOxBLS] Length = 172 Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 145/172 (84%), Positives = 162/172 (94%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQ KTQ D+PDDG+REKMIA+NRVTKVVKGGRIMGFAAL VVGDGDGRIGMGKGKSK Sbjct: 1 MAKMQQKTQGDRPDDGLREKMIAINRVTKVVKGGRIMGFAALTVVGDGDGRIGMGKGKSK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVP+AVQKAMEEARR +IKVTLK+GT+QHT+IGKHGAS VM++PAK GTGVIAGG MRAI Sbjct: 61 EVPIAVQKAMEEARRNMIKVTLKDGTLQHTIIGKHGASKVMLNPAKQGTGVIAGGAMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 F+VMGVTNVVAKS GS+NPYNMVRATL+ L+ MNTPA++AAKRGKSVEEI+G Sbjct: 121 FDVMGVTNVVAKSFGSSNPYNMVRATLNALASMNTPADVAAKRGKSVEEIVG 172 >ref|ZP_04580012.1| small subunit ribosomal protein S5 [Oxalobacter formigenes OXCC13] gb|EEO30985.1| small subunit ribosomal protein S5 [Oxalobacter formigenes OXCC13] Length = 172 Score = 298 bits (763), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/172 (84%), Positives = 162/172 (94%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQ KTQ D+PDDG+REKMIA+NRVTKVVKGGRIMGFAAL VVGDGDGRIGMGKGK+K Sbjct: 1 MAKMQQKTQGDRPDDGLREKMIAINRVTKVVKGGRIMGFAALTVVGDGDGRIGMGKGKAK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAMEEARR +IKV+LK+GT+QHT+IGKHGAS VM++PAK GTGVIAGG MRAI Sbjct: 61 EVPVAVQKAMEEARRNMIKVSLKDGTLQHTIIGKHGASKVMLNPAKQGTGVIAGGAMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 F+VMGVTNVVAKS GS+NPYNMVRATL+ L+ MNTPA+IAAKRGKSVEEI+G Sbjct: 121 FDVMGVTNVVAKSFGSSNPYNMVRATLNALASMNTPADIAAKRGKSVEEIIG 172 >ref|YP_001797009.1| 30S ribosomal protein S5 [Polynucleobacter necessarius subsp. necessarius STIR1] gb|ACB43395.1| ribosomal protein S5 [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 169 Score = 296 bits (757), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 144/169 (85%), Positives = 162/169 (95%) Query: 4 MQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSKEVP 63 MQ+K Q+++ DDG+REKM+AVNRVTKVVKGGRI+GFAAL VVGDGDGRIGMGKGKSKEVP Sbjct: 1 MQTKMQNEERDDGLREKMVAVNRVTKVVKGGRILGFAALTVVGDGDGRIGMGKGKSKEVP 60 Query: 64 VAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAIFEV 123 VAVQKAM+EARRK+IKVTL+ GT+QHTV G+HGAS V+ISPAKDGTG+IAGGPMRAIF+V Sbjct: 61 VAVQKAMDEARRKMIKVTLRKGTLQHTVTGQHGASRVLISPAKDGTGIIAGGPMRAIFDV 120 Query: 124 MGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 MGVTNVVAKS GSTNPYN+VRAT+DGLSKM+TPAEIAAKRGKSVEEILG Sbjct: 121 MGVTNVVAKSLGSTNPYNLVRATIDGLSKMSTPAEIAAKRGKSVEEILG 169 >ref|YP_585441.1| 30S ribosomal protein S5 [Cupriavidus metallidurans CH34] sp|Q1LI54.1|RS5_RALME RecName: Full=30S ribosomal protein S5 gb|ABF10172.1| 30S ribosomal subunit protein S5 [Cupriavidus metallidurans CH34] Length = 172 Score = 294 bits (753), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 143/172 (83%), Positives = 162/172 (94%) Query: 1 MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60 MAKMQ+K Q D+ DDG+REKMI+VNRVTKVVKGGRI+GFAAL VVGDGDGRIGMGKGK+K Sbjct: 1 MAKMQAKVQQDERDDGLREKMISVNRVTKVVKGGRILGFAALTVVGDGDGRIGMGKGKAK 60 Query: 61 EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120 EVPVAVQKAM+EARRK++KV LKNGT+QH V+G+HGA+ V++ PAK+GTGVIAGGPMRAI Sbjct: 61 EVPVAVQKAMDEARRKMVKVALKNGTLQHEVVGRHGAAKVLMMPAKEGTGVIAGGPMRAI 120 Query: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172 FEVMGVTNVV KS GSTNPYNMVRATLDGL+KM+TPAEIAAKRGKSVE+ILG Sbjct: 121 FEVMGVTNVVTKSHGSTNPYNMVRATLDGLTKMSTPAEIAAKRGKSVEDILG 172