BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0334.p (62 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773566.1| 50S ribosomal protein L30 [Herbaspirillum se... 117 8e-25 ref|YP_004751079.1| 50S ribosomal protein L30p (L7e) [Collimonas... 109 2e-22 ref|YP_001101378.1| 50S ribosomal protein L30 [Herminiimonas ars... 107 6e-22 ref|ZP_08274150.1| 50S ribosomal subunit protein L30 [Oxalobacte... 102 2e-20 ref|YP_297365.1| 50S ribosomal protein L30 [Ralstonia eutropha J... 99 2e-19 ref|YP_585440.1| 50S ribosomal protein L30 [Cupriavidus metallid... 99 3e-19 ref|ZP_03270080.1| ribosomal protein L30 [Burkholderia sp. H160]... 99 3e-19 ref|ZP_02886841.1| ribosomal protein L30 [Burkholderia graminis ... 99 3e-19 ref|ZP_00945194.1| LSU ribosomal protein L30P [Ralstonia solanac... 98 3e-19 gb|AEG67798.1| 50s ribosomal subunit protein l30 [Ralstonia sola... 98 3e-19 >ref|YP_003773566.1| 50S ribosomal protein L30 [Herbaspirillum seropedicae SmR1] gb|ADJ61658.1| 50S ribosomal subunit L30 protein [Herbaspirillum seropedicae SmR1] Length = 59 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 59/59 (100%), Positives = 59/59 (100%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS Sbjct: 1 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 59 >ref|YP_004751079.1| 50S ribosomal protein L30p (L7e) [Collimonas fungivorans Ter331] gb|AEK60256.1| LSU ribosomal protein L30p (L7e) [Collimonas fungivorans Ter331] Length = 77 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/62 (85%), Positives = 59/62 (95%) Query: 1 VIEMANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKV 60 VI+M T+KV+L+KGLIGTR+ HRATVRGLGLRRVNSVSEL+DTPSVRGMINKVSYLVKV Sbjct: 16 VIKMTKTVKVQLIKGLIGTRETHRATVRGLGLRRVNSVSELQDTPSVRGMINKVSYLVKV 75 Query: 61 VS 62 VS Sbjct: 76 VS 77 >ref|YP_001101378.1| 50S ribosomal protein L30 [Herminiimonas arsenicoxydans] ref|YP_001355083.1| 50S ribosomal protein L30 [Janthinobacterium sp. Marseille] sp|A6T3I6.1|RL30_JANMA RecName: Full=50S ribosomal protein L30 sp|A4G9S0.1|RL30_HERAR RecName: Full=50S ribosomal protein L30 emb|CAL63257.1| 50S ribosomal subunit protein L30 [Herminiimonas arsenicoxydans] gb|ABR91655.1| 50S ribosomal protein L30 [Janthinobacterium sp. Marseille] Length = 59 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 53/59 (89%), Positives = 57/59 (96%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 MANT+KVKLVKGLIGTR+ HRATVRGLGLR +NSVSELEDTP+VRGMINKVSYLVKVVS Sbjct: 1 MANTVKVKLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVVS 59 >ref|ZP_08274150.1| 50S ribosomal subunit protein L30 [Oxalobacteraceae bacterium IMCC9480] gb|EGF32380.1| 50S ribosomal subunit protein L30 [Oxalobacteraceae bacterium IMCC9480] Length = 62 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 50/59 (84%), Positives = 55/59 (93%) Query: 4 MANTIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 MA T+KV LVKGLIGTR+ HRATVRGLGLR +NSVSELEDTP+VRGMINKVSYLVKV+S Sbjct: 4 MAKTVKVTLVKGLIGTRETHRATVRGLGLRGINSVSELEDTPAVRGMINKVSYLVKVIS 62 >ref|YP_297365.1| 50S ribosomal protein L30 [Ralstonia eutropha JMP134] ref|YP_727902.1| 50S ribosomal protein L30 [Ralstonia eutropha H16] ref|YP_002006911.1| 50S ribosomal protein l30 [Cupriavidus taiwanensis LMG 19424] ref|YP_004687191.1| 50S ribosomal protein L30 [Cupriavidus necator N-1] sp|Q0K637.1|RL30_RALEH RecName: Full=50S ribosomal protein L30 sp|Q46WG2.1|RL30_RALEJ RecName: Full=50S ribosomal protein L30 sp|B3R7F0.1|RL30_CUPTR RecName: Full=50S ribosomal protein L30 gb|AAZ62521.1| LSU ribosomal protein L30P [Ralstonia eutropha JMP134] emb|CAJ94534.1| LSU ribosomal protein L30 [Ralstonia eutropha H16] emb|CAQ70850.1| 50S ribosomal subunit protein L30 [Cupriavidus taiwanensis LMG 19424] gb|AEI78710.1| 50S ribosomal protein L30 [Cupriavidus necator N-1] Length = 60 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/56 (82%), Positives = 55/56 (98%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++ Sbjct: 5 TVKVQLVRSLIGTREDHRATVRGLGLRRINSVSELQDTPAVRGMINKVSYLVKVLA 60 >ref|YP_585440.1| 50S ribosomal protein L30 [Cupriavidus metallidurans CH34] sp|Q1LI55.1|RL30_RALME RecName: Full=50S ribosomal protein L30 gb|ABF10171.1| 50S ribosomal subunit protein L30 [Cupriavidus metallidurans CH34] Length = 60 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/56 (82%), Positives = 55/56 (98%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV++ Sbjct: 5 TVKVQLVRSLIGTREDHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVLA 60 >ref|ZP_03270080.1| ribosomal protein L30 [Burkholderia sp. H160] ref|YP_003606438.1| ribosomal protein L30 [Burkholderia sp. CCGE1002] gb|EDZ98329.1| ribosomal protein L30 [Burkholderia sp. H160] gb|ADG16927.1| ribosomal protein L30 [Burkholderia sp. CCGE1002] Length = 60 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/56 (83%), Positives = 54/56 (96%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 T+KV+LVK LIGTR+ HRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+S Sbjct: 5 TVKVQLVKSLIGTRESHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVIS 60 >ref|ZP_02886841.1| ribosomal protein L30 [Burkholderia graminis C4D1M] gb|EDT07490.1| ribosomal protein L30 [Burkholderia graminis C4D1M] Length = 60 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/56 (83%), Positives = 54/56 (96%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVVS 62 T+KV+LVK LIGTR+ HRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+S Sbjct: 5 TVKVQLVKSLIGTRETHRATVRGLGLRRLNSVSELQDTPAVRGMINKVSYLVKVIS 60 >ref|ZP_00945194.1| LSU ribosomal protein L30P [Ralstonia solanacearum UW551] ref|YP_001900833.1| 50S ribosomal protein L30 [Ralstonia pickettii 12J] ref|YP_002260950.1| 50s ribosomal subunit protein l30 [Ralstonia solanacearum IPO1609] ref|YP_002982874.1| 50S ribosomal protein L30 [Ralstonia pickettii 12D] ref|YP_003744399.1| 50S ribosomal protein L30 [Ralstonia solanacearum CFBP2957] ref|ZP_07677572.1| ribosomal protein L30 [Ralstonia sp. 5_7_47FAA] sp|B2UEK1.1|RL30_RALPJ RecName: Full=50S ribosomal protein L30 gb|EAP72286.1| LSU ribosomal protein L30P [Ralstonia solanacearum UW551] gb|ACD28401.1| ribosomal protein L30 [Ralstonia pickettii 12J] emb|CAQ17631.1| 50s ribosomal subunit protein l30 [Ralstonia solanacearum MolK2] emb|CAQ62891.1| 50s ribosomal subunit protein l30 [Ralstonia solanacearum IPO1609] gb|ACS64202.1| ribosomal protein L30 [Ralstonia pickettii 12D] emb|CBJ41755.1| 50S ribosomal subunit protein L30 [Ralstonia solanacearum CFBP2957] gb|EFP63953.1| ribosomal protein L30 [Ralstonia sp. 5_7_47FAA] Length = 60 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/55 (83%), Positives = 54/55 (98%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVV 61 T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+ Sbjct: 5 TVKVQLVRSLIGTREDHRATVRGLGLRRMNSVSELQDTPAVRGMINKVSYLVKVI 59 >gb|AEG67798.1| 50s ribosomal subunit protein l30 [Ralstonia solanacearum Po82] Length = 63 Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 46/55 (83%), Positives = 54/55 (98%) Query: 7 TIKVKLVKGLIGTRQDHRATVRGLGLRRVNSVSELEDTPSVRGMINKVSYLVKVV 61 T+KV+LV+ LIGTR+DHRATVRGLGLRR+NSVSEL+DTP+VRGMINKVSYLVKV+ Sbjct: 8 TVKVQLVRSLIGTREDHRATVRGLGLRRMNSVSELQDTPAVRGMINKVSYLVKVI 62