BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0305.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773594.1| preprotein translocase subunit SecB protein ... 328 1e-88 ref|YP_004754706.1| protein export cytoplasm chaperone protein [... 270 4e-71 ref|ZP_08272612.1| Protein export cytoplasm chaperone protein [O... 269 9e-71 ref|YP_001354909.1| preprotein translocase SecB subunit [Janthin... 265 2e-69 ref|YP_001101203.1| preprotein translocase subunit SecB [Hermini... 258 2e-67 ref|ZP_03268590.1| protein-export protein SecB [Burkholderia sp.... 231 2e-59 ref|YP_004226785.1| protein-export protein SecB [Burkholderia sp... 231 2e-59 ref|YP_003905566.1| protein-export protein SecB [Burkholderia sp... 230 4e-59 ref|YP_003603881.1| protein-export protein SecB [Burkholderia sp... 230 5e-59 ref|YP_004030319.1| protein translocase subunit secB [Burkholder... 229 1e-58 >ref|YP_003773594.1| preprotein translocase subunit SecB protein [Herbaspirillum seropedicae SmR1] gb|ADJ61686.1| preprotein translocase subunit SecB protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 328 bits (842), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE Sbjct: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA Sbjct: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGSTAVN 164 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGSTAVN Sbjct: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGSTAVN 164 >ref|YP_004754706.1| protein export cytoplasm chaperone protein [Collimonas fungivorans Ter331] gb|AEK63883.1| Protein export cytoplasm chaperone protein [Collimonas fungivorans Ter331] Length = 168 Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 141/168 (83%), Positives = 159/168 (94%), Gaps = 4/168 (2%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 M+E+NQ+A+QQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAP IEV+VDVGAEALAEG+FE Sbjct: 1 MAEENQQAEQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPQIEVAVDVGAEALAEGIFE 60 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 STVT+TVTAKVKDKVAFLVEGKQAGIFE+RN+P EQLDPLLGIGCPNI+YPYLRAN+ADA Sbjct: 61 STVTVTVTAKVKDKVAFLVEGKQAGIFELRNIPTEQLDPLLGIGCPNIVYPYLRANLADA 120 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQ----GATLVNNGSTAVN 164 ITRAGFPP+HLAEINFEVFYQQRLQALAEQQ G ++ +G++A+N Sbjct: 121 ITRAGFPPIHLAEINFEVFYQQRLQALAEQQQKGSGDSIAVDGTSAIN 168 >ref|ZP_08272612.1| Protein export cytoplasm chaperone protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF33907.1| Protein export cytoplasm chaperone protein [Oxalobacteraceae bacterium IMCC9480] Length = 162 Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 129/143 (90%), Positives = 138/143 (96%) Query: 11 QPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFESTVTITVTAK 70 QP+FQIQRVYLKDLSLEQPNSPAIFLEQEAP++EV+VDVGAE LAEG+FESTVTITVTAK Sbjct: 7 QPIFQIQRVYLKDLSLEQPNSPAIFLEQEAPTMEVAVDVGAEPLAEGIFESTVTITVTAK 66 Query: 71 VKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADAITRAGFPPVH 130 + DKVAFLVEGKQAGIFE RN+P +QLDPLLGIGCPNI+YPYLRANIADAITRAGFPPVH Sbjct: 67 IGDKVAFLVEGKQAGIFEARNIPQDQLDPLLGIGCPNIVYPYLRANIADAITRAGFPPVH 126 Query: 131 LAEINFEVFYQQRLQALAEQQGA 153 LAEINFEVFYQQRLQALAEQQ A Sbjct: 127 LAEINFEVFYQQRLQALAEQQNA 149 >ref|YP_001354909.1| preprotein translocase SecB subunit [Janthinobacterium sp. Marseille] sp|A6T312.1|SECB_JANMA RecName: Full=Protein-export protein secB gb|ABR88669.1| preprotein translocase SecB subunit [Janthinobacterium sp. Marseille] Length = 164 Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 128/156 (82%), Positives = 143/156 (91%), Gaps = 4/156 (2%) Query: 11 QPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFESTVTITVTAK 70 QP+FQIQRVYLKDLSLEQPNSPAIFLEQE P+IEV+VDVGA+ LAEG+FESTVTITVTAK Sbjct: 7 QPLFQIQRVYLKDLSLEQPNSPAIFLEQEQPTIEVAVDVGAQPLAEGIFESTVTITVTAK 66 Query: 71 VKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADAITRAGFPPVH 130 + DK+AFLVEGKQAGIFEIRN+P EQLDPLLGIGCPN+IYPYLRANIADAITRAGFPPVH Sbjct: 67 IADKIAFLVEGKQAGIFEIRNIPDEQLDPLLGIGCPNVIYPYLRANIADAITRAGFPPVH 126 Query: 131 LAEINFEVFYQQRLQALAEQQG----ATLVNNGSTA 162 L+EINFEVFYQQRL+ALA+QQ ++ +GS A Sbjct: 127 LSEINFEVFYQQRLEALAQQQADNSSGIVMADGSAA 162 >ref|YP_001101203.1| preprotein translocase subunit SecB [Herminiimonas arsenicoxydans] sp|A4G995.1|SECB_HERAR RecName: Full=Protein-export protein secB emb|CAL63082.1| Protein export chaperone SecB [Herminiimonas arsenicoxydans] Length = 164 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 127/153 (83%), Positives = 138/153 (90%), Gaps = 4/153 (2%) Query: 11 QPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFESTVTITVTAK 70 QPVFQIQRVYLKDLSLEQPNSPAIFLEQ+AP IEV+VDVGAE LAEG+FESTVTITVTAK Sbjct: 7 QPVFQIQRVYLKDLSLEQPNSPAIFLEQDAPVIEVAVDVGAEQLAEGLFESTVTITVTAK 66 Query: 71 VKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADAITRAGFPPVH 130 + DKVAFLVE KQAGIFE RN+P EQLDPL+GIGCP+ IYPYLRANIADAITRAGFPPVH Sbjct: 67 INDKVAFLVEAKQAGIFEARNIPDEQLDPLIGIGCPSTIYPYLRANIADAITRAGFPPVH 126 Query: 131 LAEINFEVFYQQRLQALAEQQGATLVNNGSTAV 163 L+EINFEVFYQQRL+ALA+Q + NGS V Sbjct: 127 LSEINFEVFYQQRLEALAQQHAS----NGSGIV 155 >ref|ZP_03268590.1| protein-export protein SecB [Burkholderia sp. H160] gb|EDZ99818.1| protein-export protein SecB [Burkholderia sp. H160] Length = 174 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 112/156 (71%), Positives = 130/156 (83%), Gaps = 6/156 (3%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MS++N QP F IQR+YLKD+SLEQPNSPAIFLEQE PS+EV VDV AE LAE VFE Sbjct: 17 MSDENN----QPFFNIQRIYLKDMSLEQPNSPAIFLEQEMPSVEVEVDVKAERLAESVFE 72 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 VT TVTAKV DKVAFL+E KQAGIF+IRN+PAEQ+DPL+GI CP I++PYLR+NIADA Sbjct: 73 ILVTGTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADA 132 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQAL--AEQQGAT 154 ITRAGFPP+HLAEINF+ Y+QRL + A+Q GAT Sbjct: 133 ITRAGFPPIHLAEINFQALYEQRLAQMTAAQQDGAT 168 >ref|YP_004226785.1| protein-export protein SecB [Burkholderia sp. CCGE1001] gb|ADX53725.1| protein-export protein SecB [Burkholderia sp. CCGE1001] Length = 174 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 113/161 (70%), Positives = 131/161 (81%), Gaps = 5/161 (3%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MS+ N QP F IQR+YLKD+SLEQPNSPAIFLEQ+ PS+EV VDV AE LAE VFE Sbjct: 18 MSDDNN----QPFFNIQRIYLKDMSLEQPNSPAIFLEQDMPSVEVEVDVKAERLAETVFE 73 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 VT TVTAKV DKVAFL+E KQAGIF+IRN+PAEQ+DPL+GI CP I++PYLR+NIADA Sbjct: 74 ILVTGTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADA 133 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGST 161 ITRAGFPP+HLAEINF+ Y+QRL ++ Q GAT NG T Sbjct: 134 ITRAGFPPIHLAEINFQALYEQRLAQMSGQDGAT-AQNGVT 173 >ref|YP_003905566.1| protein-export protein SecB [Burkholderia sp. CCGE1003] gb|ADN56275.1| protein-export protein SecB [Burkholderia sp. CCGE1003] Length = 156 Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 112/161 (69%), Positives = 131/161 (81%), Gaps = 6/161 (3%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MS++N QP F IQR+YLKD+SLEQPNSPAIFLEQ+ PS+EV VDV AE LAE VFE Sbjct: 1 MSDENN----QPFFNIQRIYLKDMSLEQPNSPAIFLEQDMPSVEVEVDVKAERLAESVFE 56 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 VT TVTAKV DKVAFL+E KQAGIF+IRN+PAEQ+DPL+GI CP I++PYLR+NIADA Sbjct: 57 ILVTGTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADA 116 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGST 161 ITRAGFPP+HLAEINF+ Y+QRL ++ Q GA NG T Sbjct: 117 ITRAGFPPIHLAEINFQALYEQRLAQMSGQDGAA--QNGVT 155 >ref|YP_003603881.1| protein-export protein SecB [Burkholderia sp. CCGE1002] gb|ADG14370.1| protein-export protein SecB [Burkholderia sp. CCGE1002] Length = 158 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 111/161 (68%), Positives = 129/161 (80%), Gaps = 4/161 (2%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MS++N QP F IQR+YLKD+SLEQPNSPAIFLEQE PS+EV VDV AE LAE VFE Sbjct: 1 MSDENN----QPFFNIQRIYLKDMSLEQPNSPAIFLEQEMPSVEVEVDVKAERLAESVFE 56 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 VT TVTAKV DKVAFL+E KQAGIF+IRN+PAEQ+DPL+GI CP I++PYLR+NIADA Sbjct: 57 ILVTGTVTAKVSDKVAFLIEAKQAGIFDIRNIPAEQIDPLVGIACPTILFPYLRSNIADA 116 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGST 161 ITRAGFPP+HLAEINF+ Y+QRL ++ Q NG T Sbjct: 117 ITRAGFPPIHLAEINFQALYEQRLAQMSAAQQGGAAQNGVT 157 >ref|YP_004030319.1| protein translocase subunit secB [Burkholderia rhizoxinica HKI 454] emb|CBW76175.1| Protein translocase subunit secB [Burkholderia rhizoxinica HKI 454] Length = 174 Score = 229 bits (583), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 112/164 (68%), Positives = 129/164 (78%), Gaps = 3/164 (1%) Query: 1 MSEQNQEAQQQPVFQIQRVYLKDLSLEQPNSPAIFLEQEAPSIEVSVDVGAEALAEGVFE 60 MS+Q QP F IQR+YLKDLSLEQPNSPAIFLEQE PS+EV VDV AE LA+GVFE Sbjct: 14 MSDQQN---NQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPSVEVEVDVKAERLADGVFE 70 Query: 61 STVTITVTAKVKDKVAFLVEGKQAGIFEIRNVPAEQLDPLLGIGCPNIIYPYLRANIADA 120 VT TVTAKV KVAFL+E KQAGIF+IRN+P EQ+DPL+GI CP II+PYLR+NIADA Sbjct: 71 VIVTGTVTAKVATKVAFLIEAKQAGIFDIRNIPNEQIDPLIGIACPTIIFPYLRSNIADA 130 Query: 121 ITRAGFPPVHLAEINFEVFYQQRLQALAEQQGATLVNNGSTAVN 164 ITRAGFPP+HLAEINF+ Y+QRL + +Q G N GS + Sbjct: 131 ITRAGFPPIHLAEINFQALYEQRLAQVNDQPGNGAANEGSATTH 174