BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0264.p (101 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773631.1| hypothetical protein Hsero_0197 [Herbaspiril... 189 1e-46 ref|YP_001101081.1| hypothetical protein HEAR2846 [Herminiimonas... 87 6e-16 gb|EGP46690.1| regulatory protein, FmdB family domain-containing... 87 9e-16 ref|YP_004361996.1| type I antifreeze protein [Burkholderia glad... 86 2e-15 ref|ZP_02882599.1| regulatory protein, FmdB family [Burkholderia... 86 2e-15 ref|ZP_06843800.1| regulatory protein, FmdB family [Burkholderia... 85 3e-15 ref|YP_557006.1| hypothetical protein Bxe_A4045 [Burkholderia xe... 85 3e-15 ref|YP_004226892.1| FmdB family regulatory protein [Burkholderia... 85 3e-15 ref|YP_001894303.1| FmdB family regulatory protein [Burkholderia... 85 4e-15 ref|YP_003905674.1| regulatory protein, FmdB family [Burkholderi... 84 6e-15 >ref|YP_003773631.1| hypothetical protein Hsero_0197 [Herbaspirillum seropedicae SmR1] gb|ADJ61723.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 118 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTANSKGANGTGIA 60 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTANSKGANGTGIA Sbjct: 18 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTANSKGANGTGIA 77 Query: 61 GSADAPAPAADAPAAAAPAAAAPAPAPAAAPAAAPSTPSAS 101 GSADAPAPAADAPAAAAPAAAAPAPAPAAAPAAAPSTPSAS Sbjct: 78 GSADAPAPAADAPAAAAPAAAAPAPAPAAAPAAAPSTPSAS 118 >ref|YP_001101081.1| hypothetical protein HEAR2846 [Herminiimonas arsenicoxydans] emb|CAL62960.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 110 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 55/87 (63%), Gaps = 5/87 (5%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTA-----NSKGAN 55 LQKISD LT CP C K +F+KQLTAAGFQLKG+GWYVTDFRG GTA N+ + Sbjct: 18 LQKISDPVLTDCPQCGKSTFKKQLTAAGFQLKGTGWYVTDFRGGQGGTAAPAVSNTMNGD 77 Query: 56 GTGIAGSADAPAPAADAPAAAAPAAAA 82 A A PAA PA AA A ++ Sbjct: 78 APAATSEAAASVPAASIPAVAATAVSS 104 >gb|EGP46690.1| regulatory protein, FmdB family domain-containing protein 2 [Achromobacter xylosoxidans AXX-A] Length = 104 Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 39/55 (70%), Positives = 45/55 (81%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTANSKGAN 55 LQKISD L+VCP C + +F KQ+TAAGFQLKGSGWYVTDFRGNGSG + GA+ Sbjct: 18 LQKISDAPLSVCPECGQSTFSKQVTAAGFQLKGSGWYVTDFRGNGSGGQQATGAS 72 >ref|YP_004361996.1| type I antifreeze protein [Burkholderia gladioli BSR3] gb|AEA62040.1| type I antifreeze protein [Burkholderia gladioli BSR3] Length = 105 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 37/49 (75%), Positives = 42/49 (85%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTA 49 LQK+SD L+VCP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG GT+ Sbjct: 18 LQKMSDAPLSVCPECGKDAFRKQVTAAGFQLKGSGWYVTDFRGGSGGTS 66 >ref|ZP_02882599.1| regulatory protein, FmdB family [Burkholderia graminis C4D1M] gb|EDT11802.1| regulatory protein, FmdB family [Burkholderia graminis C4D1M] Length = 128 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/56 (71%), Positives = 43/56 (76%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTANSKGANG 56 LQK+SD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG SG ANG Sbjct: 18 LQKMSDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGNSGAPAKADANG 73 >ref|ZP_06843800.1| regulatory protein, FmdB family [Burkholderia sp. Ch1-1] gb|EFG68495.1| regulatory protein, FmdB family [Burkholderia sp. Ch1-1] Length = 133 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/49 (75%), Positives = 41/49 (83%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTA 49 LQK+SD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG GT+ Sbjct: 18 LQKMSDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGNGGTS 66 >ref|YP_557006.1| hypothetical protein Bxe_A4045 [Burkholderia xenovorans LB400] gb|ABE28954.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 133 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/49 (75%), Positives = 41/49 (83%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTA 49 LQK+SD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG GT+ Sbjct: 18 LQKMSDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGNGGTS 66 >ref|YP_004226892.1| FmdB family regulatory protein [Burkholderia sp. CCGE1001] gb|ADX53832.1| regulatory protein, FmdB family [Burkholderia sp. CCGE1001] Length = 118 Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/49 (75%), Positives = 41/49 (83%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSGTA 49 LQK+SD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG GT+ Sbjct: 18 LQKMSDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGSGGTS 66 >ref|YP_001894303.1| FmdB family regulatory protein [Burkholderia phytofirmans PsJN] gb|ACD15079.1| regulatory protein, FmdB family [Burkholderia phytofirmans PsJN] Length = 125 Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/47 (78%), Positives = 39/47 (82%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRGNGSG 47 LQKISD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG G Sbjct: 18 LQKISDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGNGG 64 >ref|YP_003905674.1| regulatory protein, FmdB family [Burkholderia sp. CCGE1003] gb|ADN56383.1| regulatory protein, FmdB family [Burkholderia sp. CCGE1003] Length = 124 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 9/64 (14%) Query: 1 LQKISDDALTVCPSCNKDSFRKQLTAAGFQLKGSGWYVTDFRG---------NGSGTANS 51 LQK+SD LT CP C KD+FRKQ+TAAGFQLKGSGWYVTDFRG NG+ S Sbjct: 18 LQKMSDPQLTQCPECGKDTFRKQVTAAGFQLKGSGWYVTDFRGGNSSAGASANGASNGAS 77 Query: 52 KGAN 55 KGA+ Sbjct: 78 KGAD 81