BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0214.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773718.1| diguanylate cyclase [Herbaspirillum seropedi... 737 0.0 ref|YP_004156094.1| diguanylate cyclase with gaf sensor [Variovo... 233 5e-59 ref|YP_003685819.1| diguanylate cyclase [Meiothermus silvanus DS... 209 5e-52 ref|YP_002462145.1| GAF sensor-containing diguanylate cyclase [C... 204 1e-50 ref|YP_863843.1| diguanylate cyclase with GAF sensor [Shewanella... 189 4e-46 emb|CBA29266.1| hypothetical protein Csp_A11280 [Curvibacter put... 188 1e-45 ref|YP_001637087.1| diguanylate cyclase [Chloroflexus aurantiacu... 184 2e-44 ref|YP_001892654.1| diguanylate cyclase with GAF sensor [Ralston... 174 2e-41 ref|YP_002754427.1| GAF domain/GGDEF domain protein [Acidobacter... 173 5e-41 ref|ZP_07673663.1| GAF domain/GGDEF domain protein [Ralstonia sp... 168 1e-39 >ref|YP_003773718.1| diguanylate cyclase [Herbaspirillum seropedicae SmR1] gb|ADJ61810.1| diguanylate cyclase protein [Herbaspirillum seropedicae SmR1] Length = 358 Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MTIRNFFPPTQPERARSQRGLSGSRIDLANAGGQADAWLEPTLADFISLATSLCSMPMGM 60 MTIRNFFPPTQPERARSQRGLSGSRIDLANAGGQADAWLEPTLADFISLATSLCSMPMGM Sbjct: 1 MTIRNFFPPTQPERARSQRGLSGSRIDLANAGGQADAWLEPTLADFISLATSLCSMPMGM 60 Query: 61 VSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQNGVARTVVDFSLCEYAARRPGQLTEI 120 VSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQNGVARTVVDFSLCEYAARRPGQLTEI Sbjct: 61 VSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQNGVARTVVDFSLCEYAARRPGQLTEI 120 Query: 121 SDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLK 180 SDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLK Sbjct: 121 SDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLK 180 Query: 181 LGRQLEGQLEARRAMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVD 240 LGRQLEGQLEARRAMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVD Sbjct: 181 LGRQLEGQLEARRAMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVD 240 Query: 241 VDYFKQYNDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQV 300 VDYFKQYNDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQV Sbjct: 241 VDYFKQYNDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQV 300 Query: 301 AERIKAAVEQAHWEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRKHGREPRHA 358 AERIKAAVEQAHWEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRKHGREPRHA Sbjct: 301 AERIKAAVEQAHWEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRKHGREPRHA 358 >ref|YP_004156094.1| diguanylate cyclase with gaf sensor [Variovorax paradoxus EPS] gb|ADU37983.1| diguanylate cyclase with GAF sensor [Variovorax paradoxus EPS] Length = 356 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 122/315 (38%), Positives = 178/315 (56%), Gaps = 18/315 (5%) Query: 36 DAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQN 95 D E D +LA+++C P+ ++S + D+ QW++ Sbjct: 46 DTTAEQAYDDVTTLASAVCKTPIALISLI------------------DQDRQWFKSRVGL 87 Query: 96 GVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGD 155 GV+ T + + C +A +P ++ E+ D Q D RF S L G P +RFYA PLV+++G Sbjct: 88 GVSETPRELAFCAHAILQPDEVFEVRDAQLDPRFAGSPLVTGEPGIRFYAGAPLVTADGL 147 Query: 156 IFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRAMQKLEQQTLTDALTGIGNRRS 215 GT+CV+DRE R L A++R A L RQ+ QLE R AM LE +++TD LT + NRRS Sbjct: 148 PIGTVCVIDREPRALAASERKALQSLARQVVAQLELRHAMAGLELESMTDPLTSLWNRRS 207 Query: 216 FDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYGHPAGDALLTQLGRVLRSPLRASD 275 D RL W H+R A PLSLLM+D+D+FK+ ND +GHP GD +L Q ++R + Sbjct: 208 LDRRLHAAWNLHVREAAPLSLLMIDLDHFKRINDAHGHPTGDRVLVQAAAIIRDQIGHDG 267 Query: 276 FLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAHWEHCDIEISLGAATVTPSEMCDF 335 AR+GG+EF ++LP D A Q AE+++ A+E A W + S+G AT T E Sbjct: 268 LAARFGGEEFCVVLPGMDAGTAQQRAEQLRRALEDASWPDVKVTASIGVATATADEDGSP 327 Query: 336 SALLQAADQAMYRRK 350 + +L AD+A+Y K Sbjct: 328 NVMLTRADRALYVAK 342 >ref|YP_003685819.1| diguanylate cyclase [Meiothermus silvanus DSM 9946] gb|ADH64311.1| diguanylate cyclase [Meiothermus silvanus DSM 9946] Length = 343 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 124/329 (37%), Positives = 184/329 (55%), Gaps = 34/329 (10%) Query: 36 DAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQN 95 D E D LA + P+ ++S F+ DR+ QW++ Sbjct: 23 DTLPESAYDDLALLAAHIGRTPIALIS-----------FI-------DRQRQWFKSAQGL 64 Query: 96 GVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGD 155 + + S C +A + G +T +SD D+RF D L G P++RFYA PL++ NG+ Sbjct: 65 EIHEIPREASFCAHAILQHG-VTVVSDAWQDERFADHPLVVGEPKIRFYAGAPLITPNGE 123 Query: 156 IFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRAMQKLE--QQTLTDA------- 206 GT+CVMDR+ R + ++ A L RQ+ QLE RR +++ + Q+ L +A Sbjct: 124 ALGTVCVMDRQPRQMEEEEQKALAALARQVMAQLELRREIRERQRYQELLEEANARLKVL 183 Query: 207 -----LTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYGHPAGDALLT 261 LTG+ NRR RL+EE+ R LR +PLSLLM+DVD FK+YNDTYGH AGD +L Sbjct: 184 ADHDELTGLYNRRVLMARLKEEFHRALRYDQPLSLLMIDVDGFKEYNDTYGHSAGDEVLQ 243 Query: 262 QLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAHWEHCDIEIS 321 Q+ ++ LRA D ARYGG+EF+++LP+T GA+ +AER++ A+E+A W + IS Sbjct: 244 QVAYRIKMMLRAGDLPARYGGEEFAVVLPNTTLTGAVALAERLRQAIERAPWPLRPLTIS 303 Query: 322 LGAATVTPSEMCDFSALLQAADQAMYRRK 350 +G A T + + L+ AD+A+Y K Sbjct: 304 VGVAAQTAA-AEEPHTLIATADEALYEAK 331 >ref|YP_002462145.1| GAF sensor-containing diguanylate cyclase [Chloroflexus aggregans DSM 9485] gb|ACL23709.1| diguanylate cyclase with GAF sensor [Chloroflexus aggregans DSM 9485] Length = 367 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 131/375 (34%), Positives = 180/375 (48%), Gaps = 59/375 (15%) Query: 6 FFPPTQPERARSQRGLSGSRIDLANAGGQADAWLEPTLADFISLATSLCSMPMGMVSQLH 65 FPP R L I D E D + LA +C PM +V+ + Sbjct: 12 LFPPIPANETERLRELESYHI--------LDTLPEQFYEDIVRLAAYICQTPMALVNLI- 62 Query: 66 ADIGMQHPFVSIVNGRGDRRNQWWRFPGQNGVARTVVD--FSLCEYAARRPGQLTEISDL 123 DR QW + + G + VD + C Y P + + D Sbjct: 63 -----------------DRDRQWSK--ARLGFTDSEVDRKLAFCSYTINYPDDVFVVPDA 103 Query: 124 QADQRFCDSALANGNPRVRFYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLKLGR 183 D+RF + G+P +RFYA PLV+ NG GT+CV+D LT Q + L R Sbjct: 104 TCDERFAHNPFVCGDPYIRFYAGAPLVTPNGYALGTVCVVDVRPHRLTPEQIEMLRVLAR 163 Query: 184 QLEGQLEARRAMQKLEQQTLT----------------------------DALTGIGNRRS 215 Q+ QLE RR + LEQ+ LT D LTG+ NRR Sbjct: 164 QVVRQLELRRDVLALEQRLLTNEQEKLSLRAYLLSIEAQLAQAQQQALTDPLTGLLNRRG 223 Query: 216 FDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYGHPAGDALLTQLGRVLRSPLRASD 275 F+ RL+EE R LR P++LLMVD+D+FK NDT+GH AGD +L + ++LR +R D Sbjct: 224 FEQRLQEEIDRSLRYNVPMALLMVDIDHFKAINDTFGHVAGDEILRMVAQLLRENVRRHD 283 Query: 276 FLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAHWEHCDIEISLGAATVTPSEMCDF 335 +ARYGG+EF++ILP T G + ERI+ AV+QA W + + IS+G A + M + Sbjct: 284 IVARYGGEEFAVILPATGFEGTPILGERIRRAVQQAAWPYVPVTISVGGACCD-ATMTNA 342 Query: 336 SALLQAADQAMYRRK 350 + LL AAD A+Y K Sbjct: 343 TDLLTAADHALYDAK 357 >ref|YP_863843.1| diguanylate cyclase with GAF sensor [Shewanella sp. ANA-3] ref|ZP_06067545.1| diguanylate cyclase with GAF sensor [Acinetobacter junii SH205] gb|ABK50544.1| diguanylate cyclase with GAF sensor [Shewanella sp. ANA-3] gb|EEY91915.1| diguanylate cyclase with GAF sensor [Acinetobacter junii SH205] Length = 325 Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 107/319 (33%), Positives = 162/319 (50%), Gaps = 24/319 (7%) Query: 34 QADAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPG 93 +A A + L D LA +C P+ MV+ R D + Sbjct: 16 KAPAEADQNLRDITELACYICDAPVAMVT------------------RTD--DTKLNLIA 55 Query: 94 QNGVART--VVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVS 151 + G++RT ++ S C YA P + + D D RF +A+ P RFYA PL+ Sbjct: 56 KVGISRTSVLIKESFCVYAMETPDAVMVVPDATLDHRFSTNAMVISGPGYRFYAGSPLID 115 Query: 152 SNGDIFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRAMQKLEQQTLTDALTGIG 211 G + GT+CV D + L Q + L RQ+ LE ++ ++L ++TDALTG+ Sbjct: 116 PEGAVIGTICVYDHVPKQLNQRQISSLQALSRQVIAILELKKVGEQLHNTSMTDALTGVN 175 Query: 212 NRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYGHPAGDALLTQLGRVLRSPL 271 NRR+FDL+ E+ R R + L ++D+D+FK +ND+YGH AGD L+Q+ + + Sbjct: 176 NRRAFDLKFEAEFARWQRTGQSFVLALIDIDHFKSFNDSYGHAAGDEALSQVAALFQRHS 235 Query: 272 RASDFLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAHWEHCDIEISLGAATVTPSE 331 R DF ARYGG+EF LILP TD A + E+++ V W + +S+G A+ + Sbjct: 236 RNYDFFARYGGEEFVLILPGTDTASANKTLEKLRLVVANHEWLLRQLTVSIGLASADLFD 295 Query: 332 MCDFSALLQAADQAMYRRK 350 D LL+ ADQ +Y+ K Sbjct: 296 --DKKQLLEVADQMLYKAK 312 >emb|CBA29266.1| hypothetical protein Csp_A11280 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 359 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 170/347 (48%), Gaps = 52/347 (14%) Query: 36 DAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQN 95 D E D +SLA+ +C P+ ++S + D QW++ Sbjct: 23 DTPAEQAYDDVVSLASFICDTPIALISLVDED------------------RQWFKARLGL 64 Query: 96 GVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGD 155 T + C +A P ++ E+ D D RF D+ L G+P +RFYA PL++ +G Sbjct: 65 SAMETPRGQAFCAHAIVDPDRVMEVPDALQDARFVDNPLVTGDPGIRFYAGAPLLTPSGA 124 Query: 156 IFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRAM-------------------- 195 GT+CV+D+ R LT Q +A L RQ+ L RRA Sbjct: 125 ALGTVCVIDKVPRKLTERQSEALQALSRQVVQLLALRRANAELELVAKAQTLRQQQLENH 184 Query: 196 --------QKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQY 247 Q L++QTLTD LT + NRR+FD L E+ R R+ PL LLMVD D+FK Y Sbjct: 185 QRRIEELNQDLQEQTLTDPLTALKNRRAFDTLLANEFARSQRSKSPLCLLMVDADHFKAY 244 Query: 248 NDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAA 307 ND +GH AGD L + ++S RA D +ARYGG+EF +ILPDT AL VAERI+ + Sbjct: 245 NDAFGHVAGDQALMFVSLAIKSQARAYDHVARYGGEEFCVILPDTKLNEALVVAERIRES 304 Query: 308 VEQAHWEHCDIEISLGAATV--TPSEMCDFSALLQAADQAMYRRKHG 352 ++ + S+G A PS L++ AD+AMY K G Sbjct: 305 IKSIIGLRRPMTGSIGVAYSEGVPSP----KRLVELADRAMYLAKQG 347 >ref|YP_001637087.1| diguanylate cyclase [Chloroflexus aurantiacus J-10-fl] ref|YP_002571482.1| diguanylate cyclase [Chloroflexus sp. Y-400-fl] gb|ABY36698.1| diguanylate cyclase [Chloroflexus aurantiacus J-10-fl] gb|ACM55156.1| diguanylate cyclase [Chloroflexus sp. Y-400-fl] Length = 370 Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 172/346 (49%), Gaps = 53/346 (15%) Query: 36 DAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQW--WRFPG 93 D E D + +A +C P+ +V+ + DR QW R Sbjct: 36 DTLPEQIFEDIVRIAAYICQTPIALVNLV------------------DRHRQWSMARLGF 77 Query: 94 QNG-VARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVSS 152 +G V RT+ + C + P + + D D RF + P +RFYA PLV+S Sbjct: 78 SDGEVERTL---TFCAFTINDPDHVMVVPDATRDPRFASNPYVRREPYIRFYAGAPLVTS 134 Query: 153 NGDIFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRA------------------ 194 +G GT+CV+D + R L+ Q + L RQ+ QLE RR Sbjct: 135 HGYALGTVCVIDLQPRQLSPEQLEMLRLLSRQVVTQLEIRRDLLRLEQRLLQREQEYLSL 194 Query: 195 ---MQKLE-------QQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYF 244 +Q LE QQ+LTD LTG+ NRR F LRL EE R R L+LL++DVD+F Sbjct: 195 NAYLQSLEDKLAAAQQQSLTDPLTGVFNRRGFALRLSEEIERARRYQVTLALLLIDVDHF 254 Query: 245 KQYNDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERI 304 KQYNDT+GH AGD +L + ++L D +ARYGG+EF++ILP T GA + ER+ Sbjct: 255 KQYNDTFGHLAGDEVLRMIAQLLSEGCCKHDIVARYGGEEFAVILPATAGDGAQVLGERL 314 Query: 305 KAAVEQAHWEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRK 350 + V+ A W + IS+G A + P EM D L+ AD A+Y+ K Sbjct: 315 RRLVQMAAWPLHPLTISVGGAVLQP-EMTDEHDLIARADSALYQAK 359 >ref|YP_001892654.1| diguanylate cyclase with GAF sensor [Ralstonia pickettii 12J] ref|YP_002984156.1| diguanylate cyclase [Ralstonia pickettii 12D] gb|ACD29227.1| diguanylate cyclase with GAF sensor [Ralstonia pickettii 12J] gb|ACS65484.1| diguanylate cyclase with GAF sensor [Ralstonia pickettii 12D] Length = 348 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/283 (37%), Positives = 152/283 (53%), Gaps = 16/283 (5%) Query: 83 DRRNQWWRFPGQNGVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVR 142 D + QW++ V T D S C +A Q+ I D +AD RF D+ L G P +R Sbjct: 53 DAQRQWFKSCIGLNVRETGRDISFCGHAVAE-DQMLVIPDTKADPRFADNPLVTGAPHIR 111 Query: 143 FYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARR--------- 193 FYA P+ + +G GTLCV+D++ R A+R+ L +E R Sbjct: 112 FYAGRPVRNLSGYAVGTLCVLDKKPRSFDQAERELLNDLASWVESGFRERELSETQRSIL 171 Query: 194 -AMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYG 252 +Q ++LTD + GI NRR+ L E +R +PLSLL+VDVD+FK+ NDTYG Sbjct: 172 TELQIARHESLTDPMLGIWNRRAAMELLTRECGHAMRYGQPLSLLVVDVDHFKRVNDTYG 231 Query: 253 HPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAAVEQAH 312 HP GDA+L ++ R LR R D + RYGG+EF ++LPDT + A +AER+++AVE Sbjct: 232 HPVGDAVLVEIARTLRVNSRPIDAVGRYGGEEFLVVLPDTTTLQASDIAERLRSAVESLE 291 Query: 313 WEHCDIE----ISLGAATVTPSE-MCDFSALLQAADQAMYRRK 350 + IS+G A+ P + +C + L+ AD A+ K Sbjct: 292 IATPEANIRSSISVGLASCEPEKNLCTPTDLIMRADAALLAAK 334 >ref|YP_002754427.1| GAF domain/GGDEF domain protein [Acidobacterium capsulatum ATCC 51196] gb|ACO31879.1| GAF domain/GGDEF domain protein [Acidobacterium capsulatum ATCC 51196] Length = 369 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 112/345 (32%), Positives = 167/345 (48%), Gaps = 48/345 (13%) Query: 36 DAWLEPTLADFISLATSLCSMPMGMVSQLHADIGMQHPFVSIVNGRGDRRNQWWRFPGQN 95 D E D LA +C PM ++ + D QW++ Sbjct: 23 DTPSEAAYDDLTRLAAYVCDAPMATITLVDED------------------RQWFKSRIGI 64 Query: 96 GVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVRFYAAVPLVSSNGD 155 T S C +A + +L + D D RF S L +P +RFYA +P+VS G Sbjct: 65 TAQETPRSVSFCAHAIAQ-NELFVVPDATKDARFSGSPLVLDDPNIRFYAGMPIVSPEGF 123 Query: 156 IFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARRAMQKL---------------EQ 200 GT+CV+D++ R LT ++ A L RQ+ Q + RR + +L E Sbjct: 124 HVGTMCVLDKKPRELTEEKQVALRVLARQVAAQFQMRRQLLELREARAKQAKTEQRLRES 183 Query: 201 QT-------------LTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQY 247 QT TDALTG+ NRR+FD L++ W R PLSLLMVDVD+FK+ Sbjct: 184 QTRLKEANACLQEMVTTDALTGVKNRRAFDEGLQQAWKMSARTKSPLSLLMVDVDHFKRV 243 Query: 248 NDTYGHPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAA 307 NDT GH AGD +L + + L+ R++D +ARYGG+EF ++LP T+ A+ AE+++ Sbjct: 244 NDTLGHEAGDDVLRLVAQTLQFMTRSTDMVARYGGEEFVVVLPGTEAEPAVAFAEQLRLN 303 Query: 308 VEQAHWEHCDIEISLGAATVTPSEMCDFSALLQAADQAMYRRKHG 352 + W + +S+G + + S + L+ AD A+YR K+ Sbjct: 304 IANLSWRGHPLTVSIGVDSGSGSGKTE-CELVAHADAALYRAKNS 347 >ref|ZP_07673663.1| GAF domain/GGDEF domain protein [Ralstonia sp. 5_7_47FAA] gb|EFP67867.1| GAF domain/GGDEF domain protein [Ralstonia sp. 5_7_47FAA] Length = 348 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 108/283 (38%), Positives = 151/283 (53%), Gaps = 16/283 (5%) Query: 83 DRRNQWWRFPGQNGVARTVVDFSLCEYAARRPGQLTEISDLQADQRFCDSALANGNPRVR 142 D + QW++ V T D S C +A Q+ I D QAD RF D+ L G P +R Sbjct: 53 DAQRQWFKSCIGLDVRETGRDISFCGHAVAE-DQMLVIPDTQADPRFSDNPLVTGAPHIR 111 Query: 143 FYAAVPLVSSNGDIFGTLCVMDREARVLTAAQRDAFLKLGRQLEGQLEARR--------- 193 FYA P+ + G GTLCV+D++ R A+R+ L +E R Sbjct: 112 FYAGRPVRNLAGYPVGTLCVIDQKPRPFEQAERELLDDLASWVESGFRERELSETQRSIL 171 Query: 194 -AMQKLEQQTLTDALTGIGNRRSFDLRLREEWTRHLRNARPLSLLMVDVDYFKQYNDTYG 252 +Q ++LTD + GI NRR+ L E +R +PLSLL+VDVD+FK+ NDTYG Sbjct: 172 TELQVARHESLTDPMLGIWNRRAAMELLTRECGHAMRYGQPLSLLVVDVDHFKRVNDTYG 231 Query: 253 HPAGDALLTQLGRVLRSPLRASDFLARYGGDEFSLILPDTDEIGALQVAERIKAAVE--Q 310 HPAGDA+L ++ R LR R D + RYGG+EF ++LPDT A +AER+++AVE + Sbjct: 232 HPAGDAVLVEIARKLRVNARPVDAVGRYGGEEFLVLLPDTTTTQATGIAERLRSAVESLE 291 Query: 311 AHWEHCDIE--ISLGAATVTPSEM-CDFSALLQAADQAMYRRK 350 DI IS+G A+ + C + L+ AD A+ K Sbjct: 292 IATPEADIRCTISVGLASCEQGQNPCTPTDLIMRADAALLAAK 334