BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0122.p (350 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773791.1| ATPase PilB [Herbaspirillum seropedicae SmR1... 709 0.0 ref|YP_004754568.1| Type 4 fimbrial assembly, ATPase PilB [Colli... 488 e-136 ref|YP_283866.1| type II secretion system protein E [Dechloromon... 487 e-135 ref|ZP_03696953.1| type IV-A pilus assembly ATPase PilB [Lutiell... 484 e-134 ref|YP_003169340.1| type IV-A pilus assembly ATPase PilB [Candid... 484 e-134 ref|YP_934736.1| pilus biogenesis protein [Azoarcus sp. BH72] >g... 483 e-134 ref|YP_004848679.1| type IV-A pilus assembly ATPase PilB [Pseudo... 483 e-134 gb|EGW59880.1| type IV-A pilus assembly ATPase PilB [Dechlorosom... 482 e-134 ref|NP_903498.1| type 4 fimbrial biogenesis protein [Chromobacte... 482 e-134 ref|YP_001101026.1| type 4 fimbrial biogenesis protein [Herminii... 480 e-133 >ref|YP_003773791.1| ATPase PilB [Herbaspirillum seropedicae SmR1] emb|CAP19681.1| type IV pilus assembly protein [Herbaspirillum seropedicae] gb|ADJ61883.1| ATPase PilB protein [Herbaspirillum seropedicae SmR1] Length = 377 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/350 (100%), Positives = 350/350 (100%) Query: 1 MGASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDG 60 MGASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDG Sbjct: 28 MGASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDG 87 Query: 61 KMRLALETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 KMRLALETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP Sbjct: 88 KMRLALETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 147 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA Sbjct: 148 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 207 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP Sbjct: 208 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 267 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRPARDASGSFVPHGCPACSHTGYRGRTGIYQVMPVS 300 AYNIAASVSLIVAQRLVRRLCSCRRPARDASGSFVPHGCPACSHTGYRGRTGIYQVMPVS Sbjct: 268 AYNIAASVSLIVAQRLVRRLCSCRRPARDASGSFVPHGCPACSHTGYRGRTGIYQVMPVS 327 Query: 301 ATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSLGEVLAST 350 ATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSLGEVLAST Sbjct: 328 ATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSLGEVLAST 377 >ref|YP_004754568.1| Type 4 fimbrial assembly, ATPase PilB [Collimonas fungivorans Ter331] gb|AEK63745.1| Type 4 fimbrial assembly, ATPase PilB [Collimonas fungivorans Ter331] Length = 574 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 230/367 (62%), Positives = 293/367 (79%), Gaps = 18/367 (4%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASDLHFEPFE + R+R R+DG+L ++AQPPLS+K+KL +R+K++++LDI+EKR+PQDG+ Sbjct: 206 GASDLHFEPFEKFYRIRFRVDGVLRDMAQPPLSIKEKLVSRIKVISKLDISEKRVPQDGR 265 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 MRLA+ +TR +DFRVSTLPT FGEK+V+RILD QA + ++ LGY+P Q + L +AI RP Sbjct: 266 MRLAVSKTRAIDFRVSTLPTLFGEKVVMRILDPSQAQMGIDALGYDPDQKEILMEAIQRP 325 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GMVL+TGPTGSGKTVSLY CL LN+PGINI+TAEDP EINLPG+NQV+IN+RAGL F Sbjct: 326 YGMVLVTGPTGSGKTVSLYTCLNILNQPGINISTAEDPAEINLPGVNQVNINDRAGLTFP 385 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 VAL+AFLRQDPD++MVGEIRDL+TADI+IKAAQTGH+V STLHTNDAP+TLTRL+NMGVP Sbjct: 386 VALKAFLRQDPDIIMVGEIRDLETADISIKAAQTGHMVFSTLHTNDAPSTLTRLMNMGVP 445 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRP--------------ARDASGSFVPH---GCPACS 283 A+NIA+SV LI AQRL RRLCSC++P D GS++P+ GC C+ Sbjct: 446 AFNIASSVILITAQRLARRLCSCKQPITVQEEALLEAGFTEDDLDGSWMPYKAVGCDRCN 505 Query: 284 HTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSL 343 TGY+GR GIYQ+MP++ ++ +I A +I QA+ EGV LR +GL+K +G TSL Sbjct: 506 GTGYKGRVGIYQIMPITEEIERIILAHGTALEIEAQAKREGVKTLRLSGLMKVKQGLTSL 565 Query: 344 GEVLAST 350 EVL T Sbjct: 566 EEVLGCT 572 >ref|YP_283866.1| type II secretion system protein E [Dechloromonas aromatica RCB] gb|AAZ45396.1| type II secretion system protein E:General secretory system II, protein E, N-terminal [Dechloromonas aromatica RCB] Length = 571 Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/367 (63%), Positives = 291/367 (79%), Gaps = 18/367 (4%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E + R+R R+DGIL E+A PPL++K+K+A+R+K+++RL+IAEKR+PQDG+ Sbjct: 203 GASDIHFEPYEKFYRIRFRVDGILREVATPPLAIKEKIASRIKVISRLNIAEKRVPQDGR 262 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 M+L L +TR +DFRVSTLPT GEKIV+RILD ATL +E LGYEP Q A+ AI+RP Sbjct: 263 MKLVLSKTRAIDFRVSTLPTLQGEKIVMRILDPSSATLGIEALGYEPEQKAAIMDAISRP 322 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GMVL+TGPTGSGKTVSLY CL LN+ GINI+TAEDP EINLPG+NQV++++RAGL F Sbjct: 323 YGMVLVTGPTGSGKTVSLYTCLNILNKDGINISTAEDPAEINLPGVNQVNVDDRAGLTFP 382 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 VAL+AFLRQDPD++MVGEIRDL+TA+I+IKAAQTGHLVLSTLHTNDAP TLTRL+NMGVP Sbjct: 383 VALKAFLRQDPDIIMVGEIRDLETAEISIKAAQTGHLVLSTLHTNDAPQTLTRLMNMGVP 442 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRPAR--------------DASGS---FVPHGCPACS 283 +NIA+SV LI AQRL RRLC+C++P D GS F P GC C Sbjct: 443 MFNIASSVLLITAQRLARRLCNCKKPMTVPDQALLDAGYSEADLDGSWTLFGPGGCERCK 502 Query: 284 HTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSL 343 TGY+GR GIYQVMP+S MQ +I + A D+ QA+AEGV +LR +GLLK +G TSL Sbjct: 503 GTGYKGRVGIYQVMPISEAMQRMIMSGASALDLGAQAKAEGVKNLRESGLLKVKQGVTSL 562 Query: 344 GEVLAST 350 EVL++T Sbjct: 563 DEVLSTT 569 >ref|ZP_03696953.1| type IV-A pilus assembly ATPase PilB [Lutiella nitroferrum 2002] gb|EEG10473.1| type IV-A pilus assembly ATPase PilB [Lutiella nitroferrum 2002] Length = 569 Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust. Identities = 235/368 (63%), Positives = 290/368 (78%), Gaps = 19/368 (5%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E Y R+R R+DG+L E+AQPPL LK+K+A+R+K+++RLDI+EKR+PQDG+ Sbjct: 200 GASDVHFEPYEKYYRIRYRVDGVLKEVAQPPLLLKEKIASRIKVISRLDISEKRVPQDGR 259 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 ++L L +TR +DFRVSTLPT FGEKIV+RILD ATL +EQLG+EP Q L +AI+RP Sbjct: 260 LKLVLSKTRAIDFRVSTLPTLFGEKIVMRILDQSAATLNIEQLGFEPEQKAMLLEAISRP 319 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GMVL+TGPTGSGKTVSLY CL LN+P NI+TAEDPVEINLPGINQV++NERAGL F+ Sbjct: 320 YGMVLVTGPTGSGKTVSLYTCLNILNKPDTNISTAEDPVEINLPGINQVNVNERAGLTFS 379 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 AL+AFLRQDPDV+MVGEIRD +TADIAIKAAQTGH+V STLHTN+APATLTRLLNMGV Sbjct: 380 SALKAFLRQDPDVIMVGEIRDFETADIAIKAAQTGHMVFSTLHTNNAPATLTRLLNMGVA 439 Query: 241 AYNIAASVSLIVAQRLVRRLCS-CRRPAR--------------DASGSFVPH---GCPAC 282 +N+A+SV LI+AQRL RRLCS C++P + GS+ P+ GC C Sbjct: 440 PFNVASSVLLIMAQRLARRLCSHCKKPMDIPKEALLRAGYREVELDGSWQPYGPVGCREC 499 Query: 283 SHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTS 342 +GYRGR GIY+VMP++ M LI DIA AR EG++DLRRAGLLK +G TS Sbjct: 500 RDSGYRGRVGIYEVMPITDAMTRLIMKNGTAVDIADLARQEGMVDLRRAGLLKVKQGITS 559 Query: 343 LGEVLAST 350 L E+ A+T Sbjct: 560 LAEIEAAT 567 >ref|YP_003169340.1| type IV-A pilus assembly ATPase PilB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV37411.1| type IV-A pilus assembly ATPase PilB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 571 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/367 (63%), Positives = 289/367 (78%), Gaps = 18/367 (4%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E R+R R DGIL E+A PPL +KDK+A+R+K+++RL+IAEKR+PQDG+ Sbjct: 203 GASDIHFEPYEKSYRIRFRTDGILREIASPPLVIKDKIASRIKVISRLNIAEKRVPQDGR 262 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 MRL L ++R++DFRVSTLPT +GEKIVLRILD ATL ++ LGYEP Q + L AI RP Sbjct: 263 MRLVLSKSRSIDFRVSTLPTMYGEKIVLRILDPSSATLGIDALGYEPEQKKILLDAIHRP 322 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GM+L+TGPTGSGKTVSLY CL LNRPG+NIATAEDP EI LPGINQV+++++AGL F Sbjct: 323 YGMILVTGPTGSGKTVSLYTCLNILNRPGVNIATAEDPAEIPLPGINQVNVDDKAGLTFP 382 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 +AL+AFLRQDPD++MVGEIRD++TA+IAIKAAQTGH+VLSTLHTNDAPATLTRL+NMG+P Sbjct: 383 IALKAFLRQDPDIIMVGEIRDIETAEIAIKAAQTGHMVLSTLHTNDAPATLTRLMNMGIP 442 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRP--------------ARDASGS---FVPHGCPACS 283 +N+A+S+ LI AQRLVRRLC+C+RP D G+ F P C C Sbjct: 443 TFNLASSILLITAQRLVRRLCTCKRPLETPVETLLNAGFEESDLDGTWTLFGPGECERCK 502 Query: 284 HTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSL 343 +GY+GR G+Y+VMPV+ +Q +I A DIA QAR EGV DLRR+GLLK +G TSL Sbjct: 503 GSGYKGRVGLYEVMPVTEAIQRIIMANGTELDIAIQARTEGVNDLRRSGLLKVKQGLTSL 562 Query: 344 GEVLAST 350 EVL ST Sbjct: 563 DEVLGST 569 >ref|YP_934736.1| pilus biogenesis protein [Azoarcus sp. BH72] emb|CAL95850.1| pilus biogenesis protein [Azoarcus sp. BH72] Length = 572 Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/367 (63%), Positives = 287/367 (78%), Gaps = 18/367 (4%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E Y R+R+R DGIL E+AQPPL LK+K+A R+K+++RLDI+EKR+PQDG+ Sbjct: 204 GASDIHFEPYEKYYRIRVRTDGILREIAQPPLVLKEKIAARIKVISRLDISEKRIPQDGR 263 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 M+L L +T+ +DFRVSTLPT GEKIV+RILD A L ++ LGYEP Q +AL A+ RP Sbjct: 264 MKLVLSKTKAIDFRVSTLPTLHGEKIVMRILDPSSAMLGVDALGYEPEQKKALLDAVERP 323 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GM+L+TGPTGSGKTVSLY CL LN+ G+NI+TAEDP EINLPGINQV++NE+AGL FA Sbjct: 324 YGMILVTGPTGSGKTVSLYTCLNLLNKAGVNISTAEDPAEINLPGINQVNVNEKAGLTFA 383 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 +LRAFLRQDPDV+MVGEIRDL+TA+I++KAAQTGHLVLSTLHTNDAP TL RL NMGV Sbjct: 384 ASLRAFLRQDPDVIMVGEIRDLETAEISVKAAQTGHLVLSTLHTNDAPTTLERLRNMGVA 443 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRPA--------------RDASGSFVPH---GCPACS 283 +NIA+SV +I AQRL RRLC+C++P +D GS+ P+ GC C Sbjct: 444 PFNIASSVIMITAQRLARRLCTCKKPVDIPIEALLQAGFKEQDLDGSWQPYGPVGCDRCK 503 Query: 284 HTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTSL 343 +GY+GR GIYQVMPVS + +I + DIA QAR EGV DLR++GLLK +G TSL Sbjct: 504 GSGYKGRVGIYQVMPVSEEIAHIIMTNGNSMDIAEQARREGVKDLRQSGLLKVKQGVTSL 563 Query: 344 GEVLAST 350 EVLAST Sbjct: 564 EEVLAST 570 >ref|YP_004848679.1| type IV-A pilus assembly ATPase PilB [Pseudogulbenkiania sp. NH8B] dbj|BAK78265.1| type IV-A pilus assembly ATPase PilB [Pseudogulbenkiania sp. NH8B] Length = 569 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 234/368 (63%), Positives = 290/368 (78%), Gaps = 19/368 (5%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E Y R+R R+DG+L E+AQPPL LK+K+A+R+K+++RLDI+EKR+PQDG+ Sbjct: 200 GASDVHFEPYEKYYRIRYRVDGVLKEVAQPPLLLKEKIASRIKVISRLDISEKRVPQDGR 259 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 ++L L +TR +DFRVSTLPT FGEKIV+RILD ATL +EQLG+EP Q L +AI+RP Sbjct: 260 LKLVLSKTRAIDFRVSTLPTLFGEKIVMRILDQSAATLNIEQLGFEPEQKAMLLEAISRP 319 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GMVL+TGPTGSGKTVSLY CL LN+P NI+TAEDPVEINLPGINQV++NERAGL F+ Sbjct: 320 YGMVLVTGPTGSGKTVSLYTCLNILNKPDTNISTAEDPVEINLPGINQVNVNERAGLTFS 379 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 AL+AFLRQDPDV+MVGEIRD +TADIAIKAAQTGH+V STLHTN+APATLTRLLNMGV Sbjct: 380 SALKAFLRQDPDVIMVGEIRDFETADIAIKAAQTGHMVFSTLHTNNAPATLTRLLNMGVA 439 Query: 241 AYNIAASVSLIVAQRLVRRLC-SCRRPAR--------------DASGSFVPH---GCPAC 282 +N+A+SV LI+AQRL RRLC +C++P + GS+ P+ GC C Sbjct: 440 PFNVASSVLLIMAQRLARRLCNNCKKPMDIPKEALLRAGYREVELDGSWQPYGPVGCREC 499 Query: 283 SHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTS 342 +GYRGR GIY+VMP++ M LI DIA AR EG++DLRRAGLLK +G TS Sbjct: 500 RDSGYRGRVGIYEVMPITDAMTRLIMKNGTAVDIADLARQEGMVDLRRAGLLKVKQGITS 559 Query: 343 LGEVLAST 350 L E+ A+T Sbjct: 560 LAEIEAAT 567 >gb|EGW59880.1| type IV-A pilus assembly ATPase PilB [Dechlorosoma suillum PS] Length = 557 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/369 (62%), Positives = 287/369 (77%), Gaps = 20/369 (5%) Query: 2 GASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDGK 61 GASD+HFEP+E + R+R RIDG L E+A PPL++K+K+A+R+K+++R+DI+EKR+PQDG+ Sbjct: 187 GASDIHFEPYEKFYRIRYRIDGELREVANPPLAIKEKVASRIKVISRMDISEKRVPQDGR 246 Query: 62 MRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIARP 120 M+L L +TR +DFRVSTLPT GEKIV+RILD ATL +E LGYEP Q +AL AI RP Sbjct: 247 MKLVLSKTRAIDFRVSTLPTLHGEKIVMRILDPSSATLGIEALGYEPEQKEALLNAIHRP 306 Query: 121 HGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNFA 180 +GMVL+TGPTGSGKTVSLY CL LN+PGINI+TAEDP EINL GINQV++N++AGL F+ Sbjct: 307 YGMVLVTGPTGSGKTVSLYTCLNILNKPGINISTAEDPAEINLAGINQVNVNDKAGLTFS 366 Query: 181 VALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGVP 240 AL++FLRQDPD++MVGEIRDLDTA+IAIKAAQTGH+VLSTLHTNDAP TL RL NMGVP Sbjct: 367 AALKSFLRQDPDIIMVGEIRDLDTAEIAIKAAQTGHMVLSTLHTNDAPTTLERLKNMGVP 426 Query: 241 AYNIAASVSLIVAQRLVRRLCSCRRPAR--------------DASGSFV-----PHGCPA 281 +NIA+SV LI AQRL RRLC+C+ P + GS+ P GC Sbjct: 427 TFNIASSVILITAQRLARRLCNCKVPLHVPTETLLNAGFTEAELDGSWTLYGPNPEGCER 486 Query: 282 CSHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDT 341 C G++GR GIYQVMPVS +Q +I A + DIA QA+ EGV DLR++GLLK +G T Sbjct: 487 CKGGGFKGRVGIYQVMPVSEEIQRIIMANGNSMDIAAQAKKEGVKDLRQSGLLKVKQGVT 546 Query: 342 SLGEVLAST 350 SL EVL++T Sbjct: 547 SLDEVLSTT 555 >ref|NP_903498.1| type 4 fimbrial biogenesis protein [Chromobacterium violaceum ATCC 12472] gb|AAQ61490.1| type 4 fimbrial biogenesis protein [Chromobacterium violaceum ATCC 12472] Length = 568 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/369 (62%), Positives = 292/369 (79%), Gaps = 19/369 (5%) Query: 1 MGASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDG 60 +GASD+HFEP+E Y R+R R+DG+L E+AQPPL LK+K+A+R+K+++RLDI+EKRLPQDG Sbjct: 198 IGASDIHFEPYEKYYRIRYRVDGVLKEVAQPPLLLKEKIASRIKVISRLDISEKRLPQDG 257 Query: 61 KMRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIAR 119 +++L + +TR +DFRVSTLPT +GEKIV+RILD+ A+L ++QLG+EP Q L +AIAR Sbjct: 258 RLKLVISKTRAIDFRVSTLPTLYGEKIVMRILDSSGASLDIDQLGFEPEQKAHLLKAIAR 317 Query: 120 PHGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNF 179 P+GMVL+TGPTGSGKTVSLY CL LN+P NI+TAEDPVEINLPGINQV++NE+AGL F Sbjct: 318 PYGMVLVTGPTGSGKTVSLYTCLNILNKPDTNISTAEDPVEINLPGINQVNVNEKAGLTF 377 Query: 180 AVALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGV 239 A AL+AFLRQDPDV+MVGEIRD +TADIAIKAAQTGH+V STLHTNDAP+TLTR+LNMGV Sbjct: 378 ASALKAFLRQDPDVIMVGEIRDFETADIAIKAAQTGHMVFSTLHTNDAPSTLTRMLNMGV 437 Query: 240 PAYNIAASVSLIVAQRLVRRLCS-CRRPA--------------RDASGSFVPH---GCPA 281 +NIA+SV LI+AQRL RRLCS C++P D +G + P+ GC Sbjct: 438 APFNIASSVLLIMAQRLARRLCSHCKQPVEIPKEALLRAGFTKEDLAGGWHPYGPVGCEE 497 Query: 282 CSHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDT 341 C +TGY+GR GI++ MP+S M LI + DI+ A+ EG++DLRRAGLLK + G T Sbjct: 498 CRNTGYKGRVGIFEAMPISDAMMRLIMKNGTSVDISDLAKEEGMVDLRRAGLLKVMSGVT 557 Query: 342 SLGEVLAST 350 SL EV A T Sbjct: 558 SLAEVEAVT 566 >ref|YP_001101026.1| type 4 fimbrial biogenesis protein [Herminiimonas arsenicoxydans] emb|CAL62905.1| Type 4 fimbrial assembly protein pilB [Herminiimonas arsenicoxydans] Length = 576 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 224/368 (60%), Positives = 292/368 (79%), Gaps = 18/368 (4%) Query: 1 MGASDLHFEPFEHYCRVRLRIDGILHELAQPPLSLKDKLATRLKILARLDIAEKRLPQDG 60 +GASDLHFEPFE + R+R R+DG+L ++AQPPL++K+KLA+R+K++++LDI+EKR+PQDG Sbjct: 207 LGASDLHFEPFEKFYRIRFRVDGVLRDIAQPPLAIKEKLASRIKVISKLDISEKRVPQDG 266 Query: 61 KMRLAL-ETRTVDFRVSTLPTQFGEKIVLRILDTEQATLALEQLGYEPAQLQALQQAIAR 119 +M+L + +TR++DFRVSTLPT FGEKIV+RILD QA + +E LGY+P Q + L AI R Sbjct: 267 RMKLVMSKTRSIDFRVSTLPTLFGEKIVMRILDGSQAQMGIEALGYDPDQKETLLNAIQR 326 Query: 120 PHGMVLMTGPTGSGKTVSLYACLQRLNRPGINIATAEDPVEINLPGINQVSINERAGLNF 179 P+GMVL+TGPTGSGKTVSLY CL LN+PGINI+TAEDP EINLPG+NQV++N+RAGL F Sbjct: 327 PYGMVLVTGPTGSGKTVSLYTCLNILNKPGINISTAEDPAEINLPGVNQVNVNDRAGLTF 386 Query: 180 AVALRAFLRQDPDVLMVGEIRDLDTADIAIKAAQTGHLVLSTLHTNDAPATLTRLLNMGV 239 VAL+AFLRQDPD++MVGEIRDL+TADIAIKAAQTGH+V STLHTNDAPATLTRL+NMGV Sbjct: 387 PVALKAFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMVFSTLHTNDAPATLTRLMNMGV 446 Query: 240 PAYNIAASVSLIVAQRLVRRLCSCRRPA--------------RDASGSFVPH---GCPAC 282 +NIA+SV LI AQRLVRRLC+C++ D G+++P+ GC C Sbjct: 447 APFNIASSVILITAQRLVRRLCTCKQTTVIPDEALLEAGFTEDDLDGTWLPYKPVGCERC 506 Query: 283 SHTGYRGRTGIYQVMPVSATMQSLIQAQAGTQDIARQARAEGVIDLRRAGLLKALRGDTS 342 S +GY+GR G+YQ+MP+S ++ +I + +I QA+ +GV LR +GL+K +G TS Sbjct: 507 SGSGYKGRLGVYQIMPISEEIEHIILNHGTSLEIETQAKKDGVRSLRESGLVKVKQGLTS 566 Query: 343 LGEVLAST 350 L E+L T Sbjct: 567 LEEILGCT 574