BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0110.p (137 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773804.1| hypothetical protein Hsero_0371 [Herbaspiril... 275 1e-72 ref|YP_001101173.1| hypothetical protein HEAR2939 [Herminiimonas... 104 4e-21 ref|YP_003979477.1| hypothetical protein AXYL_03442 [Achromobact... 101 4e-20 ref|ZP_08274819.1| hypothetical protein IMCC9480_3499 [Oxalobact... 99 3e-19 gb|EGP43976.1| exported protein [Achromobacter xylosoxidans AXX-A] 96 2e-18 gb|EFV83646.1| hypothetical protein HMPREF0005_02938 [Achromobac... 95 3e-18 ref|ZP_06688093.1| hypothetical protein HMPREF0004_3669 [Achromo... 94 7e-18 ref|YP_002942973.1| hypothetical protein Vapar_1056 [Variovorax ... 94 9e-18 ref|NP_885255.1| hypothetical protein BPP3076 [Bordetella parape... 94 9e-18 ref|NP_889575.1| hypothetical protein BB3039 [Bordetella bronchi... 93 1e-17 >ref|YP_003773804.1| hypothetical protein Hsero_0371 [Herbaspirillum seropedicae SmR1] emb|CAM32652.1| Exported protein [Herbaspirillum seropedicae] gb|ADJ61896.1| exported protein [Herbaspirillum seropedicae SmR1] Length = 137 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%) Query: 1 MPNSTATLRHQLLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRA 60 MPNSTATLRHQLLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRA Sbjct: 1 MPNSTATLRHQLLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRA 60 Query: 61 TCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVS 120 TCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVS Sbjct: 61 TCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVS 120 Query: 121 EGGILRETVTIVPATAK 137 EGGILRETVTIVPATAK Sbjct: 121 EGGILRETVTIVPATAK 137 >ref|YP_001101173.1| hypothetical protein HEAR2939 [Herminiimonas arsenicoxydans] emb|CAL63052.1| Conserved hypothetical protein; putative exported protein [Herminiimonas arsenicoxydans] Length = 148 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 58/117 (49%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Query: 16 ASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRATCLREAGAARQAASR 75 A AL + L S A S YQQ+ AAC G + ED+ATCL+EAGAA A R Sbjct: 15 ALALAVFAVGLSLGSTAALAADAATSTYQQERAACLKGQTYEDKATCLKEAGAALNDARR 74 Query: 76 GNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVSEGGILRETVTIV 132 G L++ GAA ++NA+ RC LP +DR DC +RV GEG V GSV GGI RET T++ Sbjct: 75 GRLSE-GAASYEQNALMRCNALPAADREDCARRVRGEGTVSGSVGTGGIYRETTTVI 130 >ref|YP_003979477.1| hypothetical protein AXYL_03442 [Achromobacter xylosoxidans A8] gb|ADP16762.1| exported protein [Achromobacter xylosoxidans A8] Length = 160 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 50/94 (53%), Positives = 64/94 (68%) Query: 41 SDYQQQVAACKNGSSSEDRATCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQS 100 S YQQ VAACK+G++ +D+A C+REAGAARQ + R NL D G QL++N + RC LP + Sbjct: 40 SQYQQDVAACKSGATGQDQAACMREAGAARQESGRNNLKDGGTDQLQQNMLDRCNRLPAA 99 Query: 101 DRIDCEKRVNGEGRVEGSVSEGGILRETVTIVPA 134 R DC ++ V GSV GG+LRETV VPA Sbjct: 100 SRQDCVTQMTSPTNVRGSVQGGGVLRETVIQVPA 133 >ref|ZP_08274819.1| hypothetical protein IMCC9480_3499 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31726.1| hypothetical protein IMCC9480_3499 [Oxalobacteraceae bacterium IMCC9480] Length = 126 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Query: 20 VIGLAALGGASHVLAAGKTDNSD-YQQQVAACKNGSSSEDRATCLREAGAARQAASRGNL 78 V+ A LGG ++ T + YQ C G S++ ATCL+EAGAAR A R L Sbjct: 8 VVLAATLGGNANAAEPSATSAEERYQSDRVICLTGQSNQSEATCLKEAGAARDEAIRHQL 67 Query: 79 TDPGAAQLKENAMKRCEGLPQSDRIDCEKRVNGEGRVEGSVSEGGILRETVTIVPA 134 D G A NAM+RC LP +D+ DCE R+ GEG V GSV +GG++RET TIVPA Sbjct: 68 GD-GNAPYDANAMRRCATLPPADKRDCESRIRGEGSVSGSVRDGGLIRETTTIVPA 122 >gb|EGP43976.1| exported protein [Achromobacter xylosoxidans AXX-A] Length = 145 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 48/92 (52%), Positives = 61/92 (66%) Query: 43 YQQQVAACKNGSSSEDRATCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDR 102 Y+Q VAACKNGS+ ++R C+REAGAARQ A+R L+D Q ++N M RC LP R Sbjct: 22 YEQDVAACKNGSTGQERTACMREAGAARQEANRQRLSDGTTEQHQQNMMDRCNRLPADSR 81 Query: 103 IDCEKRVNGEGRVEGSVSEGGILRETVTIVPA 134 DC ++ +V GSV GG+LRETV VPA Sbjct: 82 QDCMTQMTSPTQVRGSVQGGGVLRETVIQVPA 113 >gb|EFV83646.1| hypothetical protein HMPREF0005_02938 [Achromobacter xylosoxidans C54] Length = 135 Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/92 (51%), Positives = 63/92 (68%) Query: 43 YQQQVAACKNGSSSEDRATCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQSDR 102 Y+Q VAACKNGS+ ++R C+REAGAARQ A+R +L+D Q ++N ++RC LP R Sbjct: 42 YEQDVAACKNGSTGQERTACMREAGAARQEANRQHLSDGSTDQHQQNMVERCNRLPADSR 101 Query: 103 IDCEKRVNGEGRVEGSVSEGGILRETVTIVPA 134 DC ++ +V GSV GG+LRETV VPA Sbjct: 102 QDCITQMTSPTQVRGSVQGGGVLRETVIQVPA 133 >ref|ZP_06688093.1| hypothetical protein HMPREF0004_3669 [Achromobacter piechaudii ATCC 43553] gb|EFF74999.1| hypothetical protein HMPREF0004_3669 [Achromobacter piechaudii ATCC 43553] Length = 166 Score = 94.0 bits (232), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 47/94 (50%), Positives = 63/94 (67%) Query: 41 SDYQQQVAACKNGSSSEDRATCLREAGAARQAASRGNLTDPGAAQLKENAMKRCEGLPQS 100 S Y+Q VA CK+G S++DR TC+REAGAAR+ A R NL + + Q ++N + RC LP + Sbjct: 35 SQYEQDVANCKSGKSNQDRETCMREAGAAREEARRQNLKEGSSDQYQQNMVDRCNRLPAA 94 Query: 101 DRIDCEKRVNGEGRVEGSVSEGGILRETVTIVPA 134 R DC +++ V GSV GG+LRETV VPA Sbjct: 95 SRQDCMTQMSSPTNVRGSVQGGGVLRETVIQVPA 128 >ref|YP_002942973.1| hypothetical protein Vapar_1056 [Variovorax paradoxus S110] gb|ACS17707.1| hypothetical protein Vapar_1056 [Variovorax paradoxus S110] Length = 176 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 57/124 (45%), Positives = 75/124 (60%), Gaps = 9/124 (7%) Query: 14 RSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRATCLREAGAARQAA 73 RS A +I + L A+ A + +S YQQ++A C G + +DRA C+REAGAARQ A Sbjct: 6 RSMIAALIAVGGLAAATSASAQPRRGDSTYQQELAVC--GHNQQDRAACIREAGAARQEA 63 Query: 74 SRGNLTDPGAAQLKENAMKRCEGLPQSDRIDCEKRV-----NGEGRVEGSVSEGGILRET 128 +RG LT A + NA+ RC P +DR DCE RV N G V+GSV GG++RE+ Sbjct: 64 ARGGLTS--APDYQRNALARCGLQPPADRADCEARVMGGSGNTRGNVDGSVMGGGVIRES 121 Query: 129 VTIV 132 VT V Sbjct: 122 VTTV 125 >ref|NP_885255.1| hypothetical protein BPP3076 [Bordetella parapertussis 12822] emb|CAE38363.1| putative exported protein [Bordetella parapertussis] Length = 184 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 1/124 (0%) Query: 12 LLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRATCLREAGAARQ 71 + R AL +G +L A + S YQ V C +G +S+DRATCLREAGAARQ Sbjct: 17 IQRWCGALALGAGSLMAFGAHAAGTGSGQSQYQMDVQRCNSGDTSQDRATCLREAGAARQ 76 Query: 72 AASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDC-EKRVNGEGRVEGSVSEGGILRETVT 130 + R L D + ++NAM RC+ LP S + DC + +G GSV GG+LRETV Sbjct: 77 ESQRNRLDDKQEGRYQDNAMMRCKNLPASQQQDCITQMTSGNTTTRGSVGGGGVLRETVI 136 Query: 131 IVPA 134 VPA Sbjct: 137 QVPA 140 >ref|NP_889575.1| hypothetical protein BB3039 [Bordetella bronchiseptica RB50] emb|CAE33531.1| putative exported protein [Bordetella bronchiseptica RB50] Length = 189 Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 54/124 (43%), Positives = 70/124 (56%), Gaps = 1/124 (0%) Query: 12 LLRSASALVIGLAALGGASHVLAAGKTDNSDYQQQVAACKNGSSSEDRATCLREAGAARQ 71 + R AL +G +L A + S YQ V C +G +S+DRATCLREAGAARQ Sbjct: 17 IQRWCGALALGAGSLMAFGAHAAGTGSGQSQYQMDVQRCNSGDTSQDRATCLREAGAARQ 76 Query: 72 AASRGNLTDPGAAQLKENAMKRCEGLPQSDRIDC-EKRVNGEGRVEGSVSEGGILRETVT 130 + R L D + ++NAM RC+ LP S + DC + +G GSV GG+LRETV Sbjct: 77 ESQRNRLDDKQEGRYQDNAMMRCKNLPASQQQDCITQMTSGNTTTRGSVGGGGVLRETVI 136 Query: 131 IVPA 134 VPA Sbjct: 137 QVPA 140