BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0108.p (456 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773806.1| signal recognition particle subunit SRP54 pr... 908 0.0 ref|YP_001354675.1| signal recognition particle, subunit SRP54 [... 790 0.0 ref|YP_004754533.1| signal recognition particle subunit Ffh sRP5... 782 0.0 emb|CAL62893.2| Signal recognition particle protein (Fifty-four ... 778 0.0 ref|ZP_08272671.1| Signal recognition particle, subunit Ffh SRP5... 741 0.0 ref|YP_004028016.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP... 738 0.0 ref|YP_001897054.1| signal recognition particle protein [Burkhol... 729 0.0 ref|YP_004229553.1| signal recognition particle protein [Burkhol... 728 0.0 ref|ZP_04577380.1| signal recognition particle [Oxalobacter form... 727 0.0 ref|YP_441696.1| signal recognition particle protein [Burkholder... 727 0.0 >ref|YP_003773806.1| signal recognition particle subunit SRP54 protein [Herbaspirillum seropedicae SmR1] gb|ADJ61898.1| signal recognition particle subunit SRP54 protein [Herbaspirillum seropedicae SmR1] Length = 456 Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/456 (100%), Positives = 456/456 (100%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL Sbjct: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT Sbjct: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL Sbjct: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF Sbjct: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG Sbjct: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA Sbjct: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR Sbjct: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPGGMR 456 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPGGMR Sbjct: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPGGMR 456 >ref|YP_001354675.1| signal recognition particle, subunit SRP54 [Janthinobacterium sp. Marseille] gb|ABR88876.1| signal recognition particle, subunit SRP54 [Janthinobacterium sp. Marseille] Length = 455 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/453 (88%), Positives = 435/453 (96%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAK VKTMRGEARLTE+NTAEMLREVRLALLEADVALPAVREFI++VKEKA+ Sbjct: 1 MLDNLTQRLAKAVKTMRGEARLTETNTAEMLREVRLALLEADVALPAVREFISRVKEKAM 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GE+V+GSLTPGQALVGVVQRELA++MGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT Sbjct: 61 GEDVVGSLTPGQALVGVVQRELAAIMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAKYLRE KKKVLTVSADVYRPAAIGQLETVT Q GADFFPSQATDKPVDIALAAL Sbjct: 121 VGKLAKYLREQKKKKVLTVSADVYRPAAIGQLETVTAQVGADFFPSQATDKPVDIALAAL 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 DYAK+H+H+VLI+DTAGRLGID+AMM EI+A+HAA+KPIETLFVVDAMLGQDAINTAKAF Sbjct: 181 DYAKRHYHDVLIIDTAGRLGIDEAMMHEIKALHAAVKPIETLFVVDAMLGQDAINTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTG+VLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDP+RMA+RILG Sbjct: 241 SDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPARMADRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEARKGVDM AA+GLA KIK GGKFDLNDFK+QL+QMKKMGG+++L+DKLPA Sbjct: 301 MGDILALVEEARKGVDMEAAQGLAQKIKVGGKFDLNDFKSQLAQMKKMGGMSNLMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q+Q AA ANM A+KQV RMEGIINSMTPQERAKPELIKA+RKRRIA GAGVQVQEVNR Sbjct: 361 QLQQAASGANMGMADKQVIRMEGIINSMTPQERAKPELIKASRKRRIATGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+QF+QMQ+MMKKLKGG MMKMMR MKGMLPG Sbjct: 421 MLAQFDQMQTMMKKLKGGNMMKMMRGMKGMLPG 453 >ref|YP_004754533.1| signal recognition particle subunit Ffh sRP54 [Collimonas fungivorans Ter331] gb|AEK63710.1| Signal recognition particle, subunit Ffh SRP54 [Collimonas fungivorans Ter331] Length = 465 Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/430 (90%), Positives = 412/430 (95%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAKVVKTMRGEARLTE+NTA+MLREVRLALLEADVALPAVREFIA VK+KAL Sbjct: 11 MLDNLTQRLAKVVKTMRGEARLTETNTADMLREVRLALLEADVALPAVREFIANVKQKAL 70 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVI SLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT Sbjct: 71 GEEVIASLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 130 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAKYLRE KKKVLTVSADVYRPAAIGQL+TVT Q GADFFP+ TDKPV+IALAAL Sbjct: 131 VGKLAKYLREQKKKKVLTVSADVYRPAAIGQLQTVTAQVGADFFPTATTDKPVEIALAAL 190 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 DYAK+H+H+VLI+DTAGRLGID+AMM EI A+HAA+KPIETLFVVDAMLGQDAINTAKAF Sbjct: 191 DYAKRHYHDVLIIDTAGRLGIDEAMMKEISAIHAAVKPIETLFVVDAMLGQDAINTAKAF 250 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTG+VLTKLDGD+RGGAALSVRHITGKPIKFAG AEKLDGLEAFDP+RMANRILG Sbjct: 251 SDALPLTGIVLTKLDGDARGGAALSVRHITGKPIKFAGTAEKLDGLEAFDPTRMANRILG 310 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA+KGVD+AAA+ LA+KIKGGGKFDLNDFKAQL QMKKMGGL++L+DKLPA Sbjct: 311 MGDILALVEEAQKGVDVAAAKDLAHKIKGGGKFDLNDFKAQLGQMKKMGGLSNLMDKLPA 370 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AAG ANMDQAEKQVRRMEGIINSMT QERAKPELIKA+RKRRIA GAGVQVQEVNR Sbjct: 371 QFQQAAGGANMDQAEKQVRRMEGIINSMTAQERAKPELIKASRKRRIAVGAGVQVQEVNR 430 Query: 421 MLSQFEQMQS 430 MLSQF+QMQS Sbjct: 431 MLSQFDQMQS 440 >emb|CAL62893.2| Signal recognition particle protein (Fifty-four homolog) [Herminiimonas arsenicoxydans] Length = 455 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/453 (88%), Positives = 430/453 (94%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAK VKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFI +VKEKA+ Sbjct: 1 MLDNLTQRLAKAVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIGRVKEKAM 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GE+VIG+L+PGQALVGVVQRELA++MGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT Sbjct: 61 GEDVIGALSPGQALVGVVQRELAAIMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAKYLRE KKKVLTVSADVYRPAAIGQL+TVT Q GADFFPS+ TDKPVDIALAAL Sbjct: 121 VGKLAKYLREQKKKKVLTVSADVYRPAAIGQLKTVTEQVGADFFPSEITDKPVDIALAAL 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 DYAK+H+H+VLI+DTAGRLGID+AMM EI A+HAA+KPIETLFVVDAMLGQDAINTAKAF Sbjct: 181 DYAKRHYHDVLIIDTAGRLGIDEAMMQEISAIHAAVKPIETLFVVDAMLGQDAINTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTG+VLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDP RMA+RILG Sbjct: 241 SDALPLTGIVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPVRMADRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEARKGVDM AA GLA KIK GGKFDLNDFK+QL+QMKKMGG+++L+DKLPA Sbjct: 301 MGDILALVEEARKGVDMDAAAGLAQKIKVGGKFDLNDFKSQLAQMKKMGGMSNLMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q+Q AA ANM A+KQV RMEGIINSMTPQERAKP+LIKA+RKRRIA GAGVQVQEVNR Sbjct: 361 QLQQAASGANMGMADKQVVRMEGIINSMTPQERAKPDLIKASRKRRIATGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+QF+QMQSMMKKLKGG MMKMMR MKGMLPG Sbjct: 421 MLAQFDQMQSMMKKLKGGNMMKMMRGMKGMLPG 453 >ref|ZP_08272671.1| Signal recognition particle, subunit Ffh SRP54 [Oxalobacteraceae bacterium IMCC9480] gb|EGF33849.1| Signal recognition particle, subunit Ffh SRP54 [Oxalobacteraceae bacterium IMCC9480] Length = 457 Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/446 (86%), Positives = 417/446 (93%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAKVVKTMRGEARLTE+NTAEMLREVRLALLEADVALPAVREFIAKVK KA+ Sbjct: 1 MLDNLTQRLAKVVKTMRGEARLTETNTAEMLREVRLALLEADVALPAVREFIAKVKTKAM 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVIGSL+PGQALVGVVQ+ELA++MG DLGPEAS L+FATQPPA+ILMAGLQGAGKTTT Sbjct: 61 GEEVIGSLSPGQALVGVVQKELAAMMGGDLGPEASLLSFATQPPAVILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAK+L+E KKKVLTVSADVYRPAAIGQL+TVT Q GADFFPS TDKPVDIALAAL Sbjct: 121 VGKLAKFLKEKHKKKVLTVSADVYRPAAIGQLQTVTAQVGADFFPSLTTDKPVDIALAAL 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+AK+H+H+VLI+DTAGRLGID MM EI A+HAA+KPIETLFVVDAMLGQDAINTAKAF Sbjct: 181 DFAKRHYHDVLIIDTAGRLGIDAEMMAEIAALHAAVKPIETLFVVDAMLGQDAINTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 +D LPLTG+VLTKLDGD+RGGAALSVRHITGKPIKFAG AEKLDGLEAFDP RMANRILG Sbjct: 241 NDTLPLTGIVLTKLDGDARGGAALSVRHITGKPIKFAGTAEKLDGLEAFDPQRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA+KGVDMAAA+ +A KIK GG+FDLNDFKAQL QMKKMGG+ S++DKLPA Sbjct: 301 MGDILALVEEAQKGVDMAAAQDMAQKIKSGGRFDLNDFKAQLGQMKKMGGMASMMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AA ANM A+KQVRRMEGIINSMT QERAKPELIKATRKRRIA GAGVQVQEVNR Sbjct: 361 QFQQAAAGANMGNADKQVRRMEGIINSMTKQERAKPELIKATRKRRIANGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRN 446 ML+QF+QMQ+MMKKLKGGGMMKMMR+ Sbjct: 421 MLAQFDQMQTMMKKLKGGGMMKMMRS 446 >ref|YP_004028016.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Burkholderia rhizoxinica HKI 454] emb|CBW73872.1| SIGNAL RECOGNITION PARTICLE, SUBUNIT FFH/SRP54 [Burkholderia rhizoxinica HKI 454] Length = 480 Score = 738 bits (1905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/453 (80%), Positives = 405/453 (89%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQR+A+VVKT+RGEARLTE+NT EMLREVRLALLEADVALP VREFIAKV+EKAL Sbjct: 26 MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVREKAL 85 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVI SLTPGQALVGVVQREL +++G D +A++LN A PPA+ILMAGLQGAGKTTT Sbjct: 86 GEEVISSLTPGQALVGVVQRELTAVIGGDYEGKAAELNLAVTPPAVILMAGLQGAGKTTT 145 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAK LRE KKKVLTVS DVYRPAAI QL+TVT Q GADFFPSQ KP+DIA AL Sbjct: 146 VGKLAKLLREMQKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSQPDQKPLDIARDAL 205 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+AK+H+H+VLIVDTAGRLGID+AMM EI A+HA +KP ETLFVVDAMLGQDA+NTAKAF Sbjct: 206 DWAKRHYHDVLIVDTAGRLGIDEAMMQEIAALHAQLKPAETLFVVDAMLGQDAVNTAKAF 265 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 +DALPLTGVVLTKLDGDSRGGAALSVRH+TG+PIKF GV EKLDGLE F P RMANRILG Sbjct: 266 NDALPLTGVVLTKLDGDSRGGAALSVRHVTGRPIKFVGVGEKLDGLETFYPERMANRILG 325 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA++GVD+ AA+ LA K+K GG FDLNDF+AQLSQMKKMGGL+ L+DKLPA Sbjct: 326 MGDILALVEEAQRGVDVQAAQKLAEKVKKGGAFDLNDFRAQLSQMKKMGGLSMLMDKLPA 385 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AAGNA+M QAEKQ+ RMEGIINSMTP ERAKPELIKA+RKRRIA GAGVQVQEVNR Sbjct: 386 QFQQAAGNADMSQAEKQMHRMEGIINSMTPAERAKPELIKASRKRRIATGAGVQVQEVNR 445 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+QFEQM+ MMKKLKGG + KMMR MKGMLPG Sbjct: 446 MLNQFEQMRGMMKKLKGGNLQKMMRGMKGMLPG 478 >ref|YP_001897054.1| signal recognition particle protein [Burkholderia phytofirmans PsJN] gb|ACD17830.1| signal recognition particle protein [Burkholderia phytofirmans PsJN] Length = 455 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/453 (80%), Positives = 408/453 (90%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQR+A+VVKT+RGEARLTE+NT EMLREVRLALLEADVALP VREFIAKVKEKAL Sbjct: 1 MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKAL 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVI SL+PGQALVGVVQREL +++G D +A +LN A PPA+ILMAGLQGAGKTTT Sbjct: 61 GEEVISSLSPGQALVGVVQRELTAIIGGDYEGKAVELNLAVTPPAVILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAK LRE KKKVLTVS DVYRPAAI QL+TVT Q GADFFPS+ KPVDIA AA+ Sbjct: 121 VGKLAKLLREKYKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSEPDQKPVDIARAAV 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+AK+H+H+VL+VDTAGRLGID+AMM EI A+H +KP ETLFVVDAMLGQDA+NTAKAF Sbjct: 181 DWAKRHYHDVLLVDTAGRLGIDEAMMQEITALHNTLKPAETLFVVDAMLGQDAVNTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTGVVLTKLDGDSRGGAALSVRH+TGKPIKF GVAEKLDGLE F P RMANRILG Sbjct: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEVFYPDRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA++GVD+ AA+ LA+K+K GG FDLNDF+AQL+QMK MGGL+SL+DKLPA Sbjct: 301 MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQLTQMKGMGGLSSLMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AA ANM QAEKQ+RRMEGIINSMTPQERAKP+LIKATRKRRIAAGAGVQVQEVNR Sbjct: 361 QFQQAAAGANMGQAEKQMRRMEGIINSMTPQERAKPDLIKATRKRRIAAGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+Q++QM++MMKKLKGG + KMMR MKGMLPG Sbjct: 421 MLNQYDQMRTMMKKLKGGNLQKMMRGMKGMLPG 453 >ref|YP_004229553.1| signal recognition particle protein [Burkholderia sp. CCGE1001] gb|ADX56493.1| signal recognition particle protein [Burkholderia sp. CCGE1001] Length = 455 Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/453 (80%), Positives = 409/453 (90%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQR+A+VVKT+RGEARLTE+NT EMLREVRLALLEADVALP VREFIAKVKEKAL Sbjct: 1 MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVREFIAKVKEKAL 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GEEVI SL+PGQALVGVVQREL +++G D +AS+LN A PPA+ILMAGLQGAGKTTT Sbjct: 61 GEEVISSLSPGQALVGVVQRELTAVIGGDYEGKASELNLAVTPPAVILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAK LRE KKKVLTVS DVYRPAAI QL+TVT Q GADFFPS+ KPVDIA AA+ Sbjct: 121 VGKLAKLLREKYKKKVLTVSCDVYRPAAIAQLKTVTEQVGADFFPSEPDQKPVDIARAAV 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+AK+H+H+VL+VDTAGRLGID+AMM EI A+H+ +KP ETLFVVDAMLGQDA+NTAKAF Sbjct: 181 DWAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHSTLKPAETLFVVDAMLGQDAVNTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 SDALPLTGVVLTKLDGDSRGGAALSVRH+TGKPIKF GVAEKLDGLE F P RMANRILG Sbjct: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEVFYPDRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA++GVD+ AA+ LA+K+K GG FDLNDF+AQL+QMK MGGL+SL+DKLPA Sbjct: 301 MGDILALVEEAQRGVDVQAAQKLADKVKKGGDFDLNDFRAQLTQMKGMGGLSSLMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AA A+M QAEKQ+RRMEGIINSMTP ERAKP+LIKATRKRRIAAGAGVQVQEVNR Sbjct: 361 QFQQAAAGADMSQAEKQMRRMEGIINSMTPLERAKPDLIKATRKRRIAAGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+Q++QM++MMKKLKGG + KMMR MKGMLPG Sbjct: 421 MLNQYDQMRTMMKKLKGGNLQKMMRGMKGMLPG 453 >ref|ZP_04577380.1| signal recognition particle [Oxalobacter formigenes HOxBLS] gb|EEO28342.1| signal recognition particle [Oxalobacter formigenes HOxBLS] Length = 455 Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/453 (78%), Positives = 408/453 (90%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQRLAKVVKT+RGEARLTE+NTAEMLREVRLALLEADVALP V+ FI KV+EKAL Sbjct: 1 MLDNLTQRLAKVVKTIRGEARLTEANTAEMLREVRLALLEADVALPVVKNFIGKVREKAL 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 G+EV+ SL+PGQALVGVVQ+ELA++MGADLG ++S+LNFATQPPA+ILMAGLQG GKTTT Sbjct: 61 GKEVMDSLSPGQALVGVVQQELANIMGADLGEKSSRLNFATQPPAVILMAGLQGVGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLA+YLR+ KKKVLTVS DVYRPAAI QLETV+GQ+GADFF +++PV IA AAL Sbjct: 121 VGKLARYLRQEKKKKVLTVSTDVYRPAAIKQLETVSGQSGADFFQPDISEQPVAIARAAL 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+A++H ++VLIVDTAGRLGID+ MM EI +H A+ PIETLFVVDAMLGQDAIN A++F Sbjct: 181 DHARRHFYDVLIVDTAGRLGIDEQMMQEISGLHQALSPIETLFVVDAMLGQDAINVARSF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 ++ALPLTG+VLTKLDGD+RGGAALSVRHITGKP+KF GV+EKLDGLE FDP RMANRILG Sbjct: 241 NEALPLTGIVLTKLDGDARGGAALSVRHITGKPVKFVGVSEKLDGLEEFDPVRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEARK VD+ AA+ L K+K GG+FDLNDF+AQL QMK MGGL+S++DK+PA Sbjct: 301 MGDILALVEEARKNVDLKAAQELEKKLKVGGRFDLNDFQAQLEQMKNMGGLSSMMDKMPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q + AA + N DQA KQV RM GIINSMTPQERAKPELIKA+RKRRIAAGAGVQVQEVNR Sbjct: 361 QFRQAAQSTNFDQANKQVGRMAGIINSMTPQERAKPELIKASRKRRIAAGAGVQVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 +LSQFEQMQSMMKK+K GGMMK+MR +KGM+PG Sbjct: 421 LLSQFEQMQSMMKKMKNGGMMKLMRGLKGMMPG 453 >ref|YP_441696.1| signal recognition particle protein [Burkholderia thailandensis E264] ref|ZP_02373380.1| signal recognition particle protein [Burkholderia thailandensis TXDOH] ref|ZP_02387246.1| signal recognition particle protein [Burkholderia thailandensis Bt4] ref|ZP_05586127.1| signal recognition particle protein [Burkholderia thailandensis E264] gb|ABC37422.1| signal recognition particle protein [Burkholderia thailandensis E264] Length = 455 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/453 (79%), Positives = 410/453 (90%) Query: 1 MLDNLTQRLAKVVKTMRGEARLTESNTAEMLREVRLALLEADVALPAVREFIAKVKEKAL 60 MLDNLTQR+A+VVKT+RGEARLTE+NT EMLREVRLALLEADVALP VR+FIAKVKEKAL Sbjct: 1 MLDNLTQRMARVVKTLRGEARLTEANTQEMLREVRLALLEADVALPVVRDFIAKVKEKAL 60 Query: 61 GEEVIGSLTPGQALVGVVQRELASLMGADLGPEASQLNFATQPPAIILMAGLQGAGKTTT 120 GE+VIGSL+PGQALVGVVQ+EL +++G D +A++LN A PPAIILMAGLQGAGKTTT Sbjct: 61 GEDVIGSLSPGQALVGVVQKELTAVIGGDYEGKAAELNLAVTPPAIILMAGLQGAGKTTT 120 Query: 121 VGKLAKYLRETTKKKVLTVSADVYRPAAIGQLETVTGQAGADFFPSQATDKPVDIALAAL 180 VGKLAK LRE KKKVLTVS DVYRPAAI QL+TV+ Q GADFFPS KPVDIA AA+ Sbjct: 121 VGKLAKLLREKYKKKVLTVSCDVYRPAAIAQLKTVSEQVGADFFPSTPDQKPVDIANAAV 180 Query: 181 DYAKKHHHEVLIVDTAGRLGIDQAMMDEIRAVHAAIKPIETLFVVDAMLGQDAINTAKAF 240 D+AK+H+H+VL+VDTAGRLGID+AMM EI A+HAA+KP+ETLFVVDAMLGQDA+NTAKAF Sbjct: 181 DWAKRHYHDVLLVDTAGRLGIDEAMMQEIAALHAALKPVETLFVVDAMLGQDAVNTAKAF 240 Query: 241 SDALPLTGVVLTKLDGDSRGGAALSVRHITGKPIKFAGVAEKLDGLEAFDPSRMANRILG 300 +DALPLTGVVLTKLDGDSRGGAALSVRH+TGKPIKF GVAEKLDGLE F P RMANRILG Sbjct: 241 NDALPLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVAEKLDGLEVFHPDRMANRILG 300 Query: 301 MGDILALVEEARKGVDMAAAEGLANKIKGGGKFDLNDFKAQLSQMKKMGGLTSLLDKLPA 360 MGDILALVEEA++GVD+ AAE LANK+K GG FDLNDF+AQ+SQMK MGGL+SL+DKLPA Sbjct: 301 MGDILALVEEAQRGVDIQAAEKLANKVKKGGDFDLNDFRAQISQMKNMGGLSSLMDKLPA 360 Query: 361 QMQAAAGNANMDQAEKQVRRMEGIINSMTPQERAKPELIKATRKRRIAAGAGVQVQEVNR 420 Q Q AA A+M QAEKQ+RRMEGIINSMTP ERAKPE+IKATRKRRIAAGAGV VQEVNR Sbjct: 361 QFQQAAAGADMSQAEKQIRRMEGIINSMTPAERAKPEIIKATRKRRIAAGAGVPVQEVNR 420 Query: 421 MLSQFEQMQSMMKKLKGGGMMKMMRNMKGMLPG 453 ML+Q++QM++MMKKLKGG + KMMR +KGM+PG Sbjct: 421 MLNQYDQMRTMMKKLKGGNLQKMMRGIKGMMPG 453