BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0100.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773814.1| transmembrane ribonucleoside reductase small... 813 0.0 ref|YP_004754524.1| ribonucleotide reductase of class Ia (aerobi... 720 0.0 ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit... 704 0.0 ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit... 701 0.0 ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic... 679 0.0 ref|YP_004686960.1| ribonucleoside-diphosphate reductase subunit... 673 0.0 ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit be... 671 0.0 ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit be... 671 0.0 ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit be... 669 0.0 ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subun... 659 0.0 >ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit [Herbaspirillum seropedicae SmR1] gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein [Herbaspirillum seropedicae SmR1] Length = 388 Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/388 (100%), Positives = 388/388 (100%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSNAALNPALMAGNSEQVDTTRRVNAADKRI 60 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSNAALNPALMAGNSEQVDTTRRVNAADKRI Sbjct: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSNAALNPALMAGNSEQVDTTRRVNAADKRI 60 Query: 61 INGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERRLVKR 120 INGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERRLVKR Sbjct: 61 INGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERRLVKR 120 Query: 121 NLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDEAE 180 NLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDEAE Sbjct: 121 NLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGLDEAE 180 Query: 181 IFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEGLFFYVG 240 IFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEGLFFYVG Sbjct: 181 IFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEGLFFYVG 240 Query: 241 FTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSL 300 FTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSL Sbjct: 241 FTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREEIKSL 300 Query: 301 FLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMS 360 FLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMS Sbjct: 301 FLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPFPWMS 360 Query: 361 EMIDLKKERNFFETRVIEYQTGGALSWE 388 EMIDLKKERNFFETRVIEYQTGGALSWE Sbjct: 361 EMIDLKKERNFFETRVIEYQTGGALSWE 388 >ref|YP_004754524.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Collimonas fungivorans Ter331] gb|AEK63701.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Collimonas fungivorans Ter331] Length = 389 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/392 (89%), Positives = 362/392 (92%), Gaps = 7/392 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAF--GQSNAALNPALM--AGNSEQVDTTRRVNAA 56 MLSWD+E + APRT QP P+ S+ ALNPAL+ A + VD T RVNAA Sbjct: 1 MLSWDEEK---SSAPRTVPAQPAFAPSGRPQMSDTALNPALVGQAAAAPAVDVTHRVNAA 57 Query: 57 DKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERR 116 DKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERR Sbjct: 58 DKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERR 117 Query: 117 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 176 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL Sbjct: 118 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 177 Query: 177 DEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEGLF 236 DEAEIFNAYHEV SIRDKDEFLIPFI+TLTDPEFKTGT ENDQKLL+SLIVFACIMEGLF Sbjct: 178 DEAEIFNAYHEVKSIRDKDEFLIPFINTLTDPEFKTGTTENDQKLLRSLIVFACIMEGLF 237 Query: 237 FYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREE 296 FYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINT+KMENPHLWTPEFR+E Sbjct: 238 FYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTIKMENPHLWTPEFRDE 297 Query: 297 IKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPF 356 IK+LFL AVELEYRYAEDTMPRGVLGLNAPMFK YLRFIANRRAQQIGLDP+F QEENPF Sbjct: 298 IKALFLSAVELEYRYAEDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLDPMFPQEENPF 357 Query: 357 PWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 PWMSEMIDLKKERNFFETRVIEYQTGGAL+WE Sbjct: 358 PWMSEMIDLKKERNFFETRVIEYQTGGALNWE 389 >ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas arsenicoxydans] emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide reductase small subunit) [Herminiimonas arsenicoxydans] Length = 395 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/400 (84%), Positives = 359/400 (89%), Gaps = 17/400 (4%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQ-----------SNAALNPALMAGN-SEQVD 48 MLSWD+EAK P P QP LQPA Q + AL+PA+MAG + VD Sbjct: 1 MLSWDEEAK-----PAAPQAQPTLQPALQQVRDAAAQRVQAQDVALDPAVMAGKPAATVD 55 Query: 49 TTRRVNAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPN 108 TRR++AADKRIING TDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPN Sbjct: 56 PTRRMDAADKRIINGKTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPN 115 Query: 109 GLTEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ 168 GLT+DERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ Sbjct: 116 GLTDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ 175 Query: 169 YIVESLGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVF 228 YIVESLGLDE EIFNAY+E+ SIRDKD+FLIPFID LTDP F TGT ENDQ LL+SLIVF Sbjct: 176 YIVESLGLDEGEIFNAYNEIESIRDKDQFLIPFIDVLTDPNFTTGTTENDQTLLRSLIVF 235 Query: 229 ACIMEGLFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHL 288 AC+MEGLFFYVGF QILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINT+K+ENPHL Sbjct: 236 ACLMEGLFFYVGFAQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHL 295 Query: 289 WTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPL 348 WTP+FR+EIK+LFLRAVELEYRYAEDTMPRGVLGLNAPMFK YLRFIANRRAQQIGL+P+ Sbjct: 296 WTPQFRDEIKALFLRAVELEYRYAEDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPM 355 Query: 349 FAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 F QEENPFPWMSEMIDLKKERNFFETRVIEYQTGGAL+WE Sbjct: 356 FEQEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALNWE 395 >ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta [Janthinobacterium sp. Marseille] gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium sp. Marseille] Length = 392 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/392 (85%), Positives = 361/392 (92%), Gaps = 4/392 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQ----SNAALNPALMAGNSEQVDTTRRVNAA 56 MLSWD+E K A AP Q++ A Q + AL+PAL+A ++ VD TRR++AA Sbjct: 1 MLSWDEEVKPAAPAPALQPALQQVRDAAAQRLQTQDVALDPALVAKDAAAVDPTRRMDAA 60 Query: 57 DKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDERR 116 DKR+ING TDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLT+DERR Sbjct: 61 DKRVINGQTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTDDERR 120 Query: 117 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 176 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL Sbjct: 121 LVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESLGL 180 Query: 177 DEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEGLF 236 DE EIFNAY+EV SIRDKD+FLIPFI+TLTDPEFKTGT ENDQKLL+SLIVFAC+MEGLF Sbjct: 181 DEGEIFNAYNEVESIRDKDQFLIPFIETLTDPEFKTGTTENDQKLLRSLIVFACLMEGLF 240 Query: 237 FYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFREE 296 FYVGF QILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINT+K+ENPHLWTP+FREE Sbjct: 241 FYVGFAQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTIKLENPHLWTPQFREE 300 Query: 297 IKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEENPF 356 IK+LFLRAVELEYRYAEDTMPRGVLGLNAPMFK YLRFIANRRAQQIGL+P+F QEENPF Sbjct: 301 IKTLFLRAVELEYRYAEDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFEQEENPF 360 Query: 357 PWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 PWMSEMIDLKKERNFFETRVIEYQTGGAL+WE Sbjct: 361 PWMSEMIDLKKERNFFETRVIEYQTGGALNWE 392 >ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [Oxalobacteraceae bacterium IMCC9480] Length = 416 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/398 (82%), Positives = 351/398 (88%), Gaps = 18/398 (4%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAF----------GQSNAALNPALMAGNSEQVDTT 50 MLSWD+E TP + P ++ A ++ AL+P+L+ + D Sbjct: 27 MLSWDEEV--------TPAVNPAIRNAVLPTAVTAATTAAADVALDPSLVPQAEPKADPA 78 Query: 51 RRVNAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGL 110 RR+NAADKRIING+TDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWK+PNGL Sbjct: 79 RRMNAADKRIINGNTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKSPNGL 138 Query: 111 TEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 170 T+DERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI Sbjct: 139 TDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 198 Query: 171 VESLGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFAC 230 ESLGLDEAEIFNAYHEV SIRDKDEFLIPFID LTDP F TGT NDQKLLKSLIVF+C Sbjct: 199 TESLGLDEAEIFNAYHEVKSIRDKDEFLIPFIDALTDPLFTTGTTINDQKLLKSLIVFSC 258 Query: 231 IMEGLFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWT 290 +MEGLFFYVGF QILALGRQNKM+GAAEQYQYILRDESMHCNFGIDL+NT+KMENPHLWT Sbjct: 259 LMEGLFFYVGFAQILALGRQNKMVGAAEQYQYILRDESMHCNFGIDLVNTIKMENPHLWT 318 Query: 291 PEFREEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFA 350 PEFR+EIK+LFL AVELEYRYAEDTMPRGVLGLNAPMFK YLRFIANRRAQQIGL+P+F Sbjct: 319 PEFRDEIKALFLTAVELEYRYAEDTMPRGVLGLNAPMFKGYLRFIANRRAQQIGLEPMFE 378 Query: 351 QEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 EENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE Sbjct: 379 NEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 416 >ref|YP_004686960.1| ribonucleoside-diphosphate reductase subunit beta [Cupriavidus necator N-1] gb|AEI78479.1| ribonucleoside-diphosphate reductase subunit beta [Cupriavidus necator N-1] Length = 394 Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/394 (81%), Positives = 343/394 (87%), Gaps = 6/394 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSN----AALNPALMAGN--SEQVDTTRRVN 54 MLSWDD+ + QA P LQP + Q AA P ++ N + + RRVN Sbjct: 1 MLSWDDDVQATPQAAPQPALQPAVAATADQQGVLPPAATQPGILGDNPNAAAAQSNRRVN 60 Query: 55 AADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDE 114 AADKR+ING TDVNQLVPFKYKWAW+KYLAGCANHWMPQEINM RDI LWK+PNGLTEDE Sbjct: 61 AADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTEDE 120 Query: 115 RRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESL 174 RR++KRNLGFFVTADSLAANNIVLGTYR ITAPECRQYLLRQAFEEAIHTHAYQYIVESL Sbjct: 121 RRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVESL 180 Query: 175 GLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEG 234 GL+EAEIFNAYHEV SIRDKDEFLIPFIDTLTDP FKTGT ENDQKLLKSLIVFACIMEG Sbjct: 181 GLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIMEG 240 Query: 235 LFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFR 294 LFFYVGFTQILA+GRQNKM GAAEQYQYILRDES+HCNFGIDLIN +K+ENPHLWT EF+ Sbjct: 241 LFFYVGFTQILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFK 300 Query: 295 EEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEEN 354 EI LF +AV+LEYRYAEDTMPRGVLGLNAPMFK YLRFI NRR QQIGLD LFA EEN Sbjct: 301 AEITELFKKAVDLEYRYAEDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDQLFANEEN 360 Query: 355 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSW+ Sbjct: 361 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD 394 >ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha H16] emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia eutropha H16] Length = 395 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/395 (81%), Positives = 340/395 (86%), Gaps = 7/395 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSNAALNPALMAG-------NSEQVDTTRRV 53 MLSWDD+ + QA P LQP A L PA N+ + RRV Sbjct: 1 MLSWDDDVQATPQAAPQPALQPAAVAATADQQGVLPPAATQPGILGDNPNAAAAQSNRRV 60 Query: 54 NAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTED 113 NAADKR+ING TDVNQLVPFKYKWAW+KYLAGCANHWMPQEINM RDI LWK+PNGLTED Sbjct: 61 NAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTED 120 Query: 114 ERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVES 173 ERR++KRNLGFFVTADSLAANNIVLGTYR ITAPECRQYLLRQAFEEAIHTHAYQYIVES Sbjct: 121 ERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVES 180 Query: 174 LGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIME 233 LGL+EAEIFNAYHEV SIRDKDEFLIPFIDTLTDP FKTGT ENDQKLLKSLIVFACIME Sbjct: 181 LGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIME 240 Query: 234 GLFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEF 293 GLFFYVGFTQILA+GRQNKM GAAEQYQYILRDES+HCNFGIDLIN +K+ENPHLWT EF Sbjct: 241 GLFFYVGFTQILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEF 300 Query: 294 REEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEE 353 + EI LF +AV+LEYRYAEDTMPRGVLGLNAPMFKSYLRFI NRR QQIGLD LF EE Sbjct: 301 KAEITELFKKAVDLEYRYAEDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEE 360 Query: 354 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSW+ Sbjct: 361 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD 395 >ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia eutropha JMP134] gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134] Length = 394 Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/394 (81%), Positives = 340/394 (86%), Gaps = 6/394 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQLQPAFGQSNAALNPALMAG------NSEQVDTTRRVN 54 MLSWDD+ + QA P LQP Q + A AG N+ + RRVN Sbjct: 1 MLSWDDDVQATPQAAPQPALQPAAAVTADQQGVLPSSATQAGILGNNPNAAAAQSNRRVN 60 Query: 55 AADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTEDE 114 AADKR+ING TDVNQLVPFKYKWAW+KYLAGCANHWMPQEINM RDI WK+PNGLTEDE Sbjct: 61 AADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIATWKDPNGLTEDE 120 Query: 115 RRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVESL 174 RR++KRNLGFFVTADSLAANNIVLGTYR ITAPECRQYLLRQAFEEAIHTHAYQYIVESL Sbjct: 121 RRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVESL 180 Query: 175 GLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIMEG 234 GL+EAEIFNAYHEV SIRDKDEFLIPFIDTLTDP FKTGT ENDQKLLKSLIVFACIMEG Sbjct: 181 GLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIMEG 240 Query: 235 LFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEFR 294 LFFYVGFTQILA+GRQNKM GAAEQYQYILRDES+HCNFGIDLIN +K+ENPHLWT EF+ Sbjct: 241 LFFYVGFTQILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEFK 300 Query: 295 EEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEEN 354 EI LF +AV+LEYRYAEDTMPRGVLGLNAPMFKSYLRFI NRR QQIGLD LF EEN Sbjct: 301 AEITELFKKAVDLEYRYAEDTMPRGVLGLNAPMFKSYLRFICNRRCQQIGLDQLFPNEEN 360 Query: 355 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSW+ Sbjct: 361 PFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD 394 >ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus metallidurans CH34] gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus metallidurans CH34] Length = 395 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/395 (81%), Positives = 344/395 (87%), Gaps = 7/395 (1%) Query: 1 MLSWDDEAKQPAQAPRTPNLQPQ-LQPAFGQSN----AALNPALMAGN--SEQVDTTRRV 53 MLSWDD+ + QA P LQP + + Q AA P ++ N + +TRRV Sbjct: 1 MLSWDDDVQATPQAAPQPALQPAAVATSVDQQGVLPPAATEPGILGNNPNAAAAQSTRRV 60 Query: 54 NAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGLTED 113 NAADKR+ING TDVNQLVPFKYKWAW+KYLAGCANHWMPQEINM RDI LWK+PNGLTED Sbjct: 61 NAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLTED 120 Query: 114 ERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIVES 173 ERR++KRNLGFFVTADSLAANNIVLGTYR ITAPECRQYLLRQAFEEAIHTHAYQYIVES Sbjct: 121 ERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYIVES 180 Query: 174 LGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFACIME 233 LGL+EAEIFNAYHEV SIRDKDEFLIPFIDTLTDP FKTGT ENDQKLLKSLIVFACIME Sbjct: 181 LGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFACIME 240 Query: 234 GLFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTVKMENPHLWTPEF 293 GLFFYVGFTQILA+GRQNKM GAAEQYQYILRDES+HCNFGIDLIN +K+ENPHLWT EF Sbjct: 241 GLFFYVGFTQILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQIKLENPHLWTAEF 300 Query: 294 REEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQQIGLDPLFAQEE 353 + EI LF +AV+LEYRYAEDTMPRGVLGLNAPMFK YLRFI NRR QQIGLD LF EE Sbjct: 301 KAEITELFKKAVDLEYRYAEDTMPRGVLGLNAPMFKGYLRFICNRRCQQIGLDQLFPNEE 360 Query: 354 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSW+ Sbjct: 361 NPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD 395 >ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like [Ralstonia solanacearum CFBP2957] emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like [Ralstonia solanacearum CFBP2957] Length = 402 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/407 (78%), Positives = 339/407 (83%), Gaps = 24/407 (5%) Query: 1 MLSWDDEAK-------------------QPAQAPRTPNLQPQLQPAFGQSNAALNPALMA 41 MLSWDD+ K Q + L P A G NP Sbjct: 1 MLSWDDDVKPAAQPQAAPQPAYQPQPQLQSFAPDQGGVLPPSATQAVGSGILGNNP---- 56 Query: 42 GNSEQVDTTRRVNAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDI 101 N+ + RRVNAADKR+ING TDVNQLVPFKYKWAW+KYLAGCANHWMPQEINM RDI Sbjct: 57 -NAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDI 115 Query: 102 ELWKNPNGLTEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEA 161 LWK+PNGLTEDERR++KRNLGFFVTADSLAANNIVLGTYR ITAPECRQYLLRQAFEEA Sbjct: 116 ALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEA 175 Query: 162 IHTHAYQYIVESLGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKL 221 IHTHAYQYIVESLGLDEAEIFNAYHEV SIRDKDEFLIPFIDTLTDP FKTGT ENDQKL Sbjct: 176 IHTHAYQYIVESLGLDEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKL 235 Query: 222 LKSLIVFACIMEGLFFYVGFTQILALGRQNKMMGAAEQYQYILRDESMHCNFGIDLINTV 281 LKSLIVFACIMEGLFFYVGFTQILA+GRQNKM GAAEQYQYILRDES+HCNFGIDLIN + Sbjct: 236 LKSLIVFACIMEGLFFYVGFTQILAMGRQNKMTGAAEQYQYILRDESLHCNFGIDLINQI 295 Query: 282 KMENPHLWTPEFREEIKSLFLRAVELEYRYAEDTMPRGVLGLNAPMFKSYLRFIANRRAQ 341 K+ENPHLWT EF+ EI LF +AV+LEYRYAEDTMPRGVLGLNAPMFKSYLRFI NRR Q Sbjct: 296 KLENPHLWTAEFKAEITELFKKAVDLEYRYAEDTMPRGVLGLNAPMFKSYLRFICNRRCQ 355 Query: 342 QIGLDPLFAQEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWE 388 QIGL+PLF EENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSW+ Sbjct: 356 QIGLEPLFPNEENPFPWMSEMIDLKKERNFFETRVIEYQTGGALSWD 402