BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0087.p (567 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773827.1| methyl-accepting chemotaxis sensory transduc... 1121 0.0 ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I ... 532 e-149 ref|YP_004751579.1| methyl-accepting chemotaxis sensory transduc... 520 e-145 ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herba... 512 e-143 ref|YP_003777141.1| methyl-accepting chemotaxis I protein [Herba... 496 e-138 ref|YP_003777116.1| methyl-accepting chemotaxis protein [Herbasp... 490 e-136 ref|ZP_07042650.1| methyl-accepting chemotaxis sensory transduce... 484 e-134 ref|ZP_03542392.1| methyl-accepting chemotaxis sensory transduce... 477 e-132 ref|YP_003279025.1| methyl-accepting chemotaxis sensory transduc... 472 e-131 ref|YP_003776075.1| methyl-accepting chemotaxis II protein [Herb... 471 e-130 >ref|YP_003773827.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] gb|ADJ61919.1| methyl-accepting chemotaxis sensory transducer protein [Herbaspirillum seropedicae SmR1] Length = 567 Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 565/567 (99%), Positives = 565/567 (99%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK Sbjct: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV Sbjct: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 Query: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST Sbjct: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 Query: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT Sbjct: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 Query: 241 ARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 ARS DETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL Sbjct: 241 ARSDDETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 Query: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV Sbjct: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 Query: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID Sbjct: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 Query: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE Sbjct: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 Query: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQAPEVAVVATAAPAYTPRR 540 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQ PEVAVVATAAPAYTPRR Sbjct: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQVPEVAVVATAAPAYTPRR 540 Query: 541 PAVAGATSTATPALAVAQGPDEQWETF 567 PAVAGATSTATPALAVAQGPDEQWETF Sbjct: 541 PAVAGATSTATPALAVAQGPDEQWETF 567 >ref|YP_003776130.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] gb|ADJ64222.1| methyl-accepting chemotaxis transmembrane I protein [Herbaspirillum seropedicae SmR1] Length = 579 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 310/547 (56%), Positives = 394/547 (72%), Gaps = 7/547 (1%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 M WFY+ RI+ KL+ F V+ + LG+FSI QL +VN A+TE++TNWLPSIR+L ++ Sbjct: 1 MKWFYDLRISRKLITTFLVVVAMVAALGVFSIRQLDQVNSASTEISTNWLPSIRTLARLQ 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 +A+SR+R+ + Q L D K+ V M + L A+ +Y QISEP EKA++P V Sbjct: 61 LAMSRLRSFELQHILAK-DAKEYEEVERGMQVQMNNLKTAQAEYVTQISEPEEKAIYPEV 119 Query: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 I F++ H +A R GK +EA+ L G + + Y + L +DKLA VN G+ S Sbjct: 120 EKLIATFVSEHDKIIALSRQGKDEEARNLQRGESTKAYRTSLQQIDKLAAVNDKGADISN 179 Query: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 + A+ Y QA++W++ + + + LA++++R+IA PL A A +A GDLT I Sbjct: 180 KQADAIYAQARLWIIVTVAACIGLAMLLAVWVSRLIARPLEEAVSVAQRVAGGDLTTRIE 239 Query: 241 ARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 DETGQL AL +MN SL IV QVR GT I TAS +I+SGNLDLSSRTEEQASSL Sbjct: 240 PAGKDETGQLLVALKSMNDSLVGIVGQVRMGTQTITTASTEIASGNLDLSSRTEEQASSL 299 Query: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 EETASAMEELTSTV+QNA+NARQANQLA+SAS +A +GG VV+QV++TMGSI+ASS+KI Sbjct: 300 EETASAMEELTSTVKQNADNARQANQLAVSASEVASQGGAVVNQVVDTMGSINASSRKIA 359 Query: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA AAKEIK LI+ Sbjct: 360 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKELIE 419 Query: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 SV QV +GS LV++AG+T+SEVV SV+RVTD++ EIS+AS EQ++GIEQVN AI QMDE Sbjct: 420 GSVAQVDMGSKLVERAGITMSEVVQSVRRVTDIVGEISSASQEQSEGIEQVNLAIAQMDE 479 Query: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRL---PG--AARQQAPEVAVVATAAPA 535 VTQQNAALVEEAA+A+QSL QA+ L++ VG F+L P A+R +V TAA Sbjct: 480 VTQQNAALVEEAAAAAQSLQEQAETLTQTVGFFKLEQQPDEPASRPPVRAASVARTAAVR 539 Query: 536 YTP-RRP 541 + P RP Sbjct: 540 HAPATRP 546 >ref|YP_004751579.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] gb|AEK60756.1| methyl-accepting chemotaxis sensory transducer [Collimonas fungivorans Ter331] Length = 635 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 289/517 (55%), Positives = 384/517 (74%), Gaps = 6/517 (1%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 M WFYN +IATKLLL+FA +L+LT LG+ SI QL +VN E+ +NWLPS+R L +K Sbjct: 96 MTWFYNLKIATKLLLSFALILMLTLVLGVASITQLGQVNATTNEINSNWLPSVRMLLTLK 155 Query: 61 VALSRVRANQAQLALYD--GDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFP 118 L+ +R + Q + + D +S+ IG + +++ + +Y +SE E+A++ Sbjct: 156 SNLALLRNVEMQHVMSNDAADMDKSAQFIGDIRGDVQ---KTLSEYAPLVSEE-ERAVYD 211 Query: 119 GVNARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQ 178 + +I +++ + + RA + D+A + + G + + L +++L ++N DGS Sbjct: 212 QLKDKIPRYLEMDKKIVDISRAFRKDDAIKEIRGDSLAAIVELDKQVERLVKINSDGSAA 271 Query: 179 STRSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTAD 238 S + E Y++A+ W++ ++I LL G ALAL+IARV+A PL A + A +A GDLTAD Sbjct: 272 SAKDGEAIYNKARFWMIGLMIAMLLLGFALALWIARVVAQPLEFAVDVARRVAGGDLTAD 331 Query: 239 ITARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQAS 298 I RS+DETGQL AL MN SL++IV +VRSGTD IATASGQI++GN +LS RTE+QAS Sbjct: 332 IEVRSSDETGQLMQALKDMNHSLQKIVGEVRSGTDTIATASGQIAAGNQNLSQRTEQQAS 391 Query: 299 SLEETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKK 358 SLEETA++ME+LTSTV+QNA+NA QANQLA+SAS +A GG VV+QV+ TMG+I+ SSKK Sbjct: 392 SLEETAASMEQLTSTVKQNADNASQANQLAVSASEVALHGGTVVTQVVSTMGAINTSSKK 451 Query: 359 IVDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTL 418 IVDII VID IAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AAKEIK L Sbjct: 452 IVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKGL 511 Query: 419 IDNSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQM 478 ID+SV++VGLG+ LV +AG T+ E+V+SV+RVTD+M EI+AAS EQT GIEQ+NQAI+QM Sbjct: 512 IDDSVEKVGLGTRLVDQAGSTMEEIVASVRRVTDIMGEITAASQEQTAGIEQINQAISQM 571 Query: 479 DEVTQQNAALVEEAASASQSLSHQAQRLSELVGVFRL 515 D+VTQQNAALVEEAA+A+ SL QA L+ +VG F+L Sbjct: 572 DQVTQQNAALVEEAAAAAASLQDQAGALAGVVGAFKL 608 >ref|YP_003777989.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ66081.1| methyl-accepting chemotaxis protein I, serine sensor receptor protein [Herbaspirillum seropedicae SmR1] Length = 516 Score = 512 bits (1319), Expect = e-143, Method: Compositional matrix adjust. Identities = 290/516 (56%), Positives = 387/516 (75%), Gaps = 3/516 (0%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 M WF N +IA KL+++FA V++LT LG+F+I +L VNQA+T++ATNWLP+I++ ++ Sbjct: 1 MTWFNNLKIAKKLIVSFAAVIVLTVILGLFAIRELKAVNQASTDMATNWLPTIKAAQSIQ 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 +L R+R ++ Q+ ++ A+ + ++ L+ LA+ R Y QISE EK L+ Sbjct: 61 ASLPRMRISELQMVTAATPAEREDALKAIKSR-LDILAKQRAAYEAQISEAEEKVLYEKF 119 Query: 121 NARIDKFIALHGDTLAAVRA-GKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQS 179 + ++ + + LA + A GK +EA+ L G + + + S++ ++D++ +VN GS +S Sbjct: 120 SKSFATYLEIDKE-LARISAEGKEEEARALFKGDSNKTFRSMIENMDEIIKVNDAGSKRS 178 Query: 180 TRSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADI 239 AE Y A +W++ +L ++ L LA+ +AR ++ PL A A +A GDLT DI Sbjct: 179 DDMAEQVYRSATLWIIGLLAAIVVIALGLAVMVARAVSRPLNEAVAVAERVAQGDLTMDI 238 Query: 240 TARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASS 299 A S DETG L +L AMN SL++IV +VR+GTD I TAS +I++GNLDLSSRTEEQA S Sbjct: 239 RATSTDETGMLMHSLRAMNDSLQQIVGEVRTGTDTITTASQEIATGNLDLSSRTEEQAGS 298 Query: 300 LEETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKI 359 LEETASAMEELT+TV+QNA+NARQANQLA SAS IA +GG VV QV++TM I SS +I Sbjct: 299 LEETASAMEELTATVKQNADNARQANQLAASASDIATQGGAVVGQVVQTMEGITESSNRI 358 Query: 360 VDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLI 419 DIISVID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LI Sbjct: 359 ADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLI 418 Query: 420 DNSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMD 479 D+SV++VG GS LV++AG T+SEVV+SV+RVTDV++EISAAS EQ+ GIE++N+AITQMD Sbjct: 419 DDSVEKVGAGSQLVERAGATMSEVVASVRRVTDVVAEISAASNEQSTGIEEINRAITQMD 478 Query: 480 EVTQQNAALVEEAASASQSLSHQAQRLSELVGVFRL 515 EVTQQNAALVEEAA+A+QSL QA RLS++V VF+L Sbjct: 479 EVTQQNAALVEEAAAAAQSLQDQAARLSQVVSVFKL 514 >ref|YP_003777141.1| methyl-accepting chemotaxis I protein [Herbaspirillum seropedicae SmR1] gb|ADJ65233.1| methyl-accepting chemotaxis I protein [Herbaspirillum seropedicae SmR1] Length = 516 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 290/515 (56%), Positives = 384/515 (74%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 M WF N +IA KL LAF VL+L LGIFSI QL KV A++E++T+W+P+ + L D+K Sbjct: 1 MGWFKNLKIARKLQLAFLAVLVLMAILGIFSISQLAKVKNASSEISTDWMPAQKKLGDLK 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 + R+R ++QLA+YDGD + + ++ L L + K Y + E+ L+ V Sbjct: 61 LYFVRLRGTESQLAIYDGDVEAMNGLVSRSQAILTGLDKTMKDYEASLDNVPERELYTKV 120 Query: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 +I +F+A H +AA A + + L LG + + Y +L DL+KL ++N DG +T Sbjct: 121 AGQIGEFLAEHKKIVAAFLARDNPQGRDLFLGYSNKLYPQILGDLEKLIKINQDGGNAAT 180 Query: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 A+ T+ +++V V+ +L AL G+ LAL++AR+IA PL+ A + A +A GDL A I Sbjct: 181 ADADDTFSKSRVGVLVLLAAALAIGMGLALYVARIIARPLQDAVDIARRVAEGDLGAQIQ 240 Query: 241 ARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 +S DETGQL AL MN LR++V QVRSGTD+IATAS +I++GNLDLS RTE+QA++L Sbjct: 241 VQSKDETGQLMQALDTMNEGLRKVVGQVRSGTDSIATASTEIATGNLDLSRRTEQQATAL 300 Query: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 EETASA+EELTSTV+QN +NARQANQLA++AS +A GG VV QV+ETM +I+ +S +IV Sbjct: 301 EETASALEELTSTVKQNTDNARQANQLAMAASGVAARGGGVVGQVVETMEAINEASNRIV 360 Query: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 +IISVID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSA+AAKEIK LID Sbjct: 361 EIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKQLID 420 Query: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 +SV +VG G+ LV++AG T+SEVV SV+RVTDV+SEISAAS EQ+ GI+++N+A+TQMDE Sbjct: 421 DSVSKVGAGTSLVRQAGSTMSEVVESVKRVTDVVSEISAASTEQSVGIDEINRAVTQMDE 480 Query: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRL 515 VTQQNAALVEEAA+A+QS+ QA RL+ V VF+L Sbjct: 481 VTQQNAALVEEAAAAAQSMQEQASRLAATVSVFKL 515 >ref|YP_003777116.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] gb|ADJ65208.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae SmR1] Length = 571 Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust. Identities = 298/575 (51%), Positives = 390/575 (67%), Gaps = 12/575 (2%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 MNWFYN +IA KL AF VL+ GLG FS ++L VN+++T++A NWLPSI +L+ M Sbjct: 1 MNWFYNLKIAHKLNAAFLVVLVFIIGLGGFSSLELAAVNKSSTDIARNWLPSIDALSKMS 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 +AL+R R+ Q L D+++ A +K + L + +Y +SEP EK L+P + Sbjct: 61 LALARSRSFDMQ-QLLTADKQEEKASRERADKQMATLLKEVARYGKLVSEPREKELYPEI 119 Query: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 I + H A + A L+ + Y L + +L++VN G+ S Sbjct: 120 ERNIALYKEAHERMSALFEQDQKQAAHALMNSTSTPVYRKLQEQIGELSEVNSKGAALSD 179 Query: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 A+ Y QA + ++A++ ++ +AL+ +IAR++A PL +A + A +AAGDLTADI Sbjct: 180 ADADHIYGQANMAILALVTTCVVLAMALSWWIARLVARPLANAVDIARQVAAGDLTADIP 239 Query: 241 ARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 DETGQL AL MN +L IV +VR GTD I TAS +I++GN+DLSSRTE+QA +L Sbjct: 240 TAHRDETGQLLEALRQMNGNLLNIVREVRQGTDTITTASAEIATGNMDLSSRTEQQAGAL 299 Query: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 EETASAMEELTSTVRQN++NARQANQLA++AS +A+ GG VV +V+ TM +I+ SS+KIV Sbjct: 300 EETASAMEELTSTVRQNSDNARQANQLAVNASEVAQAGGTVVGKVVATMSAINDSSRKIV 359 Query: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 DII VID IAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSA AA EIK LID Sbjct: 360 DIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAHEIKALID 419 Query: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 +SV +V GS LV +AG T++EVV+SV+RV+D+++EI+AA EQTQGIEQ+N A+ QMDE Sbjct: 420 DSVAKVDTGSKLVDEAGQTMNEVVASVKRVSDIVAEITAAGAEQTQGIEQINNAVVQMDE 479 Query: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQAPEVA--VVATAAPA--Y 536 TQQNAALVE+AA+A+++L QA RLSE V VFRL Q P V ATA P Sbjct: 480 NTQQNAALVEQAAAAAKALQEQAGRLSETVSVFRLDA---QHVPVVVSRAAATAQPERDI 536 Query: 537 TPRRPAVAGATST--ATPALAVAQGPDEQ--WETF 567 TP RPA+A + S A PA + EQ WE F Sbjct: 537 TPARPALAQSRSKVMARPAHSNTSASAEQGDWEQF 571 >ref|ZP_07042650.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni S44] gb|EFI63740.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni S44] Length = 585 Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust. Identities = 287/590 (48%), Positives = 395/590 (66%), Gaps = 28/590 (4%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 MN+F N ++A KLL++F +LL++ G++ +VQ+ +VN AT+LA WLP+ R+L DM+ Sbjct: 1 MNFFRNLKLANKLLVSFVLILLISAVSGLYGLVQMERVNATATDLARQWLPAARNLQDMR 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNL----EALAEARKQYTGQISEPGEKAL 116 L R R+ Q + QSS + + +K++ + L + ++ Y + E+AL Sbjct: 61 YQLQRYRSQTMQHVM-----AQSSEEMAVYDKSMPKLWDELVQNQQSYAKYVRTDKERAL 115 Query: 117 FPGVNARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGS 176 + + + + DEA +L G + + + LD L+++N + Sbjct: 116 LAEIGEELKAYAVQTAKVVDLSHQLLNDEASEILRGESLKISRGINTRLDALSEINHQAT 175 Query: 177 VQSTRSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLT 236 ++ ++ + Y A+ WV+A+L+G+++ G+ALA+ IAR I+ PL+SA + A +AAGDL+ Sbjct: 176 EETNQAGDDLYAAARWWVMALLLGSIVIGVALAVLIARSISRPLQSAVQLAQSVAAGDLS 235 Query: 237 ADITARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQ 296 A IT +S DE GQL AL MNTSL+RIV QVR GTD+IA+AS QI+SGN DLSSRTEEQ Sbjct: 236 ASITVQSQDEVGQLLQALKDMNTSLQRIVGQVRQGTDSIASASSQIASGNQDLSSRTEEQ 295 Query: 297 ASSLEETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASS 356 ASSLE+TA++MEELT+TV+QNA NA+QANQ+A +AS +A GG V+QV++TM +I+ SS Sbjct: 296 ASSLEQTAASMEELTATVQQNAGNAQQANQMASAASQVAVRGGATVAQVVQTMSAINDSS 355 Query: 357 KKIVDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIK 416 +KIVDII VIDSIAFQTNILALNAAVEAARAG+QGRGFAVVA+EVR+LAQRSA AAK+IK Sbjct: 356 RKIVDIIGVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRTLAQRSAEAAKQIK 415 Query: 417 TLIDNSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAIT 476 LID+SV +V GS V +AG T+ E+V SV+RVTD+M EIS AS +QT GIEQV QA+T Sbjct: 416 QLIDDSVSKVQEGSTQVDEAGRTMDEIVMSVRRVTDIMGEISVASHQQTSGIEQVTQAVT 475 Query: 477 QMDEVTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQ-----APEVAVVAT 531 QMD++TQQNAALVEEAA+A+ +L QA L+E V F+L + Q AP A + Sbjct: 476 QMDQMTQQNAALVEEAAAATDALRSQAAALAETVSFFKLGAQSGLQATPALAPARAAIKV 535 Query: 532 AAPAYTP----RRPAVAG---------ATSTATP-ALAVAQGPDEQWETF 567 AP P +RPA++ A S A P VA D +WE+F Sbjct: 536 PAPLKAPSAALKRPAMSAGSKPPVLSPAKSAAAPQPQKVATADDGEWESF 585 >ref|ZP_03542392.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] gb|EED66678.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni KF-1] Length = 592 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 285/599 (47%), Positives = 393/599 (65%), Gaps = 39/599 (6%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 MN+F N ++A KLL++F +LL++ G++ +VQ+ +VN AT+LA WLP+ R+L DM+ Sbjct: 1 MNFFRNLKLANKLLVSFVLILLISAVSGLYGLVQMERVNATATDLARQWLPAARNLQDMR 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNL----EALAEARKQYTGQISEPGEKAL 116 L R R+ Q + QSS + + +K++ + L + ++ Y + E+AL Sbjct: 61 YQLQRYRSQTMQHVM-----AQSSEEMAVYDKSMPKLWDELVQNQQSYAKYVKTDKERAL 115 Query: 117 FPGVNARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGS 176 + + + + D+A +L G + + + LD L+++N + Sbjct: 116 LAEIGEDLKAYAVQTAKVVDLSHQLLNDDASEILRGESLKISRGINTRLDALSEINYQAT 175 Query: 177 VQSTRSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLT 236 ++ ++ + Y A+ WV+A+L+G++ G+ALA+ IAR I+ PL+SA + A +AAGDL+ Sbjct: 176 EETNQAGDDLYAAARWWVMALLLGSIAIGVALAVLIARSISRPLQSAVQLAQSVAAGDLS 235 Query: 237 ADITARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQ 296 A IT +S DE GQL AL MNTSL+RIV QVR GTD+IA+AS QI+SGN DLSSRTEEQ Sbjct: 236 ASITVQSRDEVGQLLQALKGMNTSLQRIVGQVRQGTDSIASASSQIASGNQDLSSRTEEQ 295 Query: 297 ASSLEETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASS 356 ASSLE+TA++MEELT+TV+QNA NA+QANQ+A +AS +A GG V+QV++TM +I+ SS Sbjct: 296 ASSLEQTAASMEELTATVQQNAGNAQQANQMASAASQVAVRGGATVAQVVQTMSAINESS 355 Query: 357 KKIVDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIK 416 +KIVDII VIDSIAFQTNILALNAAVEAARAG+QGRGFAVVA+EVR+LAQRSA AAK+IK Sbjct: 356 RKIVDIIGVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRTLAQRSAEAAKQIK 415 Query: 417 TLIDNSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAIT 476 LID+SV +V GS V +AG T+ E+V SV+RVTD+M EIS AS +QT GIEQVNQA+T Sbjct: 416 QLIDDSVSKVQEGSTQVDEAGKTMDEIVMSVRRVTDIMGEISVASHQQTSGIEQVNQAVT 475 Query: 477 QMDEVTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLPGAARQQAPEVAVVATAAPAY 536 QMD++TQQNAALVEEAA+A+ +L QA L+E V F+L + QA AT PA Sbjct: 476 QMDQMTQQNAALVEEAAAATDALRGQAAALAETVSFFKLGAQSGLQAAPALAPATFKPA- 534 Query: 537 TPRR-------PAVAGATSTATPALAVAQGP---------------------DEQWETF 567 P R P A +T+ P ++ A P D +WE+F Sbjct: 535 -PARAAIKVSAPVRAQSTALKRPVMSAASKPPVLSSAKSAAAPQPQKAATADDGEWESF 592 >ref|YP_003279025.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni CNB-2] gb|ACY33729.1| methyl-accepting chemotaxis sensory transducer [Comamonas testosteroni CNB-2] Length = 602 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 267/519 (51%), Positives = 368/519 (70%), Gaps = 9/519 (1%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 MN+F N ++A KLL++F +LL++ G++ +VQ+ +VN AT+LA WLP+ R+L DM+ Sbjct: 11 MNFFRNLKLANKLLVSFVLILLISAVSGLYGLVQMERVNATATDLARQWLPAARNLQDMR 70 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNL----EALAEARKQYTGQISEPGEKAL 116 L R R+ Q + QSS + + +K++ + L + ++ Y + E+AL Sbjct: 71 YQLQRYRSQTMQHVM-----AQSSEEMAVYDKSMPKLWDELVQNQQSYAKYVKTDKERAL 125 Query: 117 FPGVNARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGS 176 + + + + DEA +L G + + + LD L+++N + Sbjct: 126 LAEIGEELKAYAVQTAKVVDLSHQLLNDEASEILRGESLKISRGINTRLDALSEINHQAT 185 Query: 177 VQSTRSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLT 236 ++ ++ + Y A+ WV+A+L+G+++ G+ALA+ IAR I+ PL+SA + A +AAGDL+ Sbjct: 186 EETNQAGDDLYAAARWWVMALLLGSIVIGVALAVLIARSISRPLQSAVQLAQSVAAGDLS 245 Query: 237 ADITARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQ 296 A IT +S DE GQL AL MNTSL+RIV QVR GTD+IA+AS QI+SGN DLSSRTEEQ Sbjct: 246 ASITVQSQDEVGQLLQALKDMNTSLQRIVGQVRQGTDSIASASSQIASGNQDLSSRTEEQ 305 Query: 297 ASSLEETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASS 356 ASSLE+TA++MEELT+TV+QNA NA+QANQ+A +AS +A GG V+QV++TM +I+ SS Sbjct: 306 ASSLEQTAASMEELTATVQQNAGNAQQANQMASAASQVAVRGGATVAQVVQTMSAINDSS 365 Query: 357 KKIVDIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIK 416 +KIVDII VIDSIAFQTNILALNAAVEAARAG+QGRGFAVVA+EVR+LAQRSA AAK+IK Sbjct: 366 RKIVDIIGVIDSIAFQTNILALNAAVEAARAGDQGRGFAVVASEVRTLAQRSAEAAKQIK 425 Query: 417 TLIDNSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAIT 476 LID+SV +V GS V +AG T+ E+V SV+RVTD+M EIS AS +QT GIEQV QA+T Sbjct: 426 QLIDDSVSKVQEGSTQVDEAGRTMDEIVMSVRRVTDIMGEISVASHQQTSGIEQVTQAVT 485 Query: 477 QMDEVTQQNAALVEEAASASQSLSHQAQRLSELVGVFRL 515 QMD++TQQNAALVEEAA+A+ +L QA L+E V F+L Sbjct: 486 QMDQMTQQNAALVEEAAAATDALRSQAAALAETVSFFKL 524 >ref|YP_003776075.1| methyl-accepting chemotaxis II protein [Herbaspirillum seropedicae SmR1] gb|ADJ64167.1| methyl-accepting chemotaxis II protein [Herbaspirillum seropedicae SmR1] Length = 537 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 269/516 (52%), Positives = 365/516 (70%) Query: 1 MNWFYNRRIATKLLLAFACVLLLTGGLGIFSIVQLHKVNQAATELATNWLPSIRSLNDMK 60 M F + RI+ KL ++F +L+L G FS+ QL VNQ+A ELATNWLPSI++L D+K Sbjct: 1 MKKFRDLRISRKLFISFGLILVLATVTGTFSLWQLSLVNQSANELATNWLPSIKTLGDVK 60 Query: 61 VALSRVRANQAQLALYDGDEKQSSAVIGLMNKNLEALAEARKQYTGQISEPGEKALFPGV 120 + L+R+R+N++QL LY D + + + L+ L A Y QISEP EKAL+P Sbjct: 61 LLLARLRSNESQLILYAADPGLTKTLQARTDDVLKDLEAALDTYRSQISEPEEKALYPQA 120 Query: 121 NARIDKFIALHGDTLAAVRAGKLDEAKRLLLGPAFENYLSLLNDLDKLAQVNLDGSVQST 180 + R+++ + HG + A+ + AK + G + + Y SLL D LA VN G QS Sbjct: 121 SQRLEQLLKEHGALMNALAQQDVAAAKAIFAGASSDLYFSLLKDFSTLADVNRRGGDQSA 180 Query: 181 RSAETTYDQAQVWVVAILIGALLAGLALALFIARVIATPLRSAGEFAHLIAAGDLTADIT 240 Y ++ +W VA L + G+ALA+ IAR+I++PL A A +AAG+L+ +I Sbjct: 181 ADTARIYRESLMWGVASLAISTFIGVALAVIIARIISSPLSLAARIADTVAAGNLSTEIG 240 Query: 241 ARSADETGQLTAALAAMNTSLRRIVSQVRSGTDAIATASGQISSGNLDLSSRTEEQASSL 300 A +DETGQ+ AL MN SL I+S V+S ++ IATAS QI++GNLDLSSRTEEQASSL Sbjct: 241 AAGSDETGQVIGALGKMNQSLCHIISGVKSCSETIATASQQIATGNLDLSSRTEEQASSL 300 Query: 301 EETASAMEELTSTVRQNAENARQANQLALSASTIAEEGGKVVSQVIETMGSIDASSKKIV 360 ++TA+AME++T ++ + ++R+AN+LAL AS++A E G+ + V++TM SI ++S +IV Sbjct: 301 QQTAAAMEQITGSMLETTAHSRRANELALGASSVAGEAGQTMQDVVDTMSSISSASGRIV 360 Query: 361 DIISVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSATAAKEIKTLID 420 +IISVIDSIAFQTNILALNAAVEAARAG+ GRGFA+VA EVRSLAQRSATAAKEIK LID Sbjct: 361 EIISVIDSIAFQTNILALNAAVEAARAGDGGRGFAIVAAEVRSLAQRSATAAKEIKNLID 420 Query: 421 NSVQQVGLGSGLVQKAGVTISEVVSSVQRVTDVMSEISAASGEQTQGIEQVNQAITQMDE 480 N+V QVG GS LVQKAG T+ VV+SV++VT ++++I+A S Q++ I ++N AI QMD Sbjct: 421 NTVDQVGAGSQLVQKAGQTMQAVVASVEQVTSIVADIAAVSDHQSKEISEINFAIAQMDS 480 Query: 481 VTQQNAALVEEAASASQSLSHQAQRLSELVGVFRLP 516 VTQQNAALVEEA +ASQ+L QA +LS +V FRLP Sbjct: 481 VTQQNAALVEEAEAASQALQEQAMQLSSMVSRFRLP 516