BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0085.p (460 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773829.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutam... 932 0.0 ref|YP_001354657.1| UDP-N-acetylmuramate: L-alanyl-gamma-D-gluta... 745 0.0 ref|YP_001100996.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutam... 745 0.0 ref|YP_004751439.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutam... 741 0.0 ref|ZP_08274963.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamy... 729 0.0 ref|ZP_07677802.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamy... 714 0.0 ref|ZP_02378464.1| UDP-N-acetylmuramate [Burkholderia ubonensis Bu] 708 0.0 ref|YP_002006634.1| UDP-N-acetylmuramate:l-alanyl-gamma-d-glutam... 705 0.0 ref|ZP_02907660.1| UDP-N-acetylmuramate [Burkholderia ambifaria ... 705 0.0 ref|YP_001118431.1| UDP-N-acetylmuramate [Burkholderia vietnamie... 704 0.0 >ref|YP_003773829.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61921.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 460 Score = 932 bits (2409), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/460 (99%), Positives = 459/460 (99%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL Sbjct: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM Sbjct: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC Sbjct: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 Query: 241 WSEREDFGVAQGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAARH 300 WSEREDFGVAQGQSGWSLLTH+DGRFDVFFDGQ QGTVEWQLTGEHNRMNALAAIAAARH Sbjct: 241 WSEREDFGVAQGQSGWSLLTHEDGRFDVFFDGQTQGTVEWQLTGEHNRMNALAAIAAARH 300 Query: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI Sbjct: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 Query: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPLGAKAAAF 420 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPLGAKAAAF Sbjct: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPLGAKAAAF 420 Query: 421 DDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 DDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA Sbjct: 421 DDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 >ref|YP_001354657.1| UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Janthinobacterium sp. Marseille] gb|ABR89478.1| UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Janthinobacterium sp. Marseille] Length = 457 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/461 (80%), Positives = 404/461 (87%), Gaps = 6/461 (1%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILG+CGTFMGGLAVLAK AGHTVTGCDANVYPPMSTQLEAQGI L +G+ Q+ L Sbjct: 1 MHIHILGVCGTFMGGLAVLAKAAGHTVTGCDANVYPPMSTQLEAQGIKLIEGYGPEQISL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 PDL+VIGNVVSRGNPLMEEILNRGLPY SGPQW+GE+ILQ KWVLAVAGTHGKTTTS+M Sbjct: 61 APDLYVIGNVVSRGNPLMEEILNRGLPYTSGPQWIGEHILQGKWVLAVAGTHGKTTTSSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AGY PGFLIGGVPMNFG+SARL G G + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWILEDAGYDPGFLIGGVPMNFGISARL--SGSGKESSFFVIEADEYDTAFFDKRSKFV 178 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HY +TA+LNNLEYDHADIFPDL AIETQFHHLVRTVPG+GR+I NGRE +LQRVL RGC Sbjct: 179 HYHAKTAILNNLEYDHADIFPDLHAIETQFHHLVRTVPGVGRVIANGREASLQRVLQRGC 238 Query: 241 WSEREDFGVAQGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAARH 300 WSE E FG G+ GWSL THDDG FDV F+G+ QGTV+W LTGEHNRMNALAAIAAARH Sbjct: 239 WSESEWFG---GKEGWSLATHDDGNFDVIFNGELQGTVQWSLTGEHNRMNALAAIAAARH 295 Query: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 VGV AQAIAALG F++VKRRMELRG+ +AVYDDFAHHPTAIATTV GLRKKVG ARI Sbjct: 296 VGVLPAQAIAALGQFENVKRRMELRGTVKDIAVYDDFAHHPTAIATTVEGLRKKVGKARI 355 Query: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAH-TGRDALGWDLGEALAPLGAKAAA 419 LAVLEPRSNTMKLGTMK+ALPGSL DADL+FG+GA G+DALGWDL EALAPLG KA + Sbjct: 356 LAVLEPRSNTMKLGTMKEALPGSLVDADLIFGYGASGNGKDALGWDLAEALAPLGEKARS 415 Query: 420 FDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 F+DL LVQA+ +A+ GD VLVMSNGGFGGVHQK+LDALA Sbjct: 416 FNDLPTLVQAIAQSAQAGDQVLVMSNGGFGGVHQKILDALA 456 >ref|YP_001100996.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Herminiimonas arsenicoxydans] emb|CAL62875.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (Murein peptide ligase) [Herminiimonas arsenicoxydans] Length = 459 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/461 (80%), Positives = 405/461 (87%), Gaps = 4/461 (0%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILG+CGTFMGGLAVLAK AGHTVTGCDANVYPPMSTQLEAQGI L +GF Q++L Sbjct: 1 MHIHILGVCGTFMGGLAVLAKAAGHTVTGCDANVYPPMSTQLEAQGIKLIEGFGTEQLDL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 EPDL+VIGNVVSRGNPLMEEILNRGLPY SGPQW+GE+ILQ KWVLAVAGTHGKTTTS+M Sbjct: 61 EPDLYVIGNVVSRGNPLMEEILNRGLPYTSGPQWIGEHILQGKWVLAVAGTHGKTTTSSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AGY PGFLIGGVPMNFG+SARL G G + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWILEDAGYDPGFLIGGVPMNFGISARL--SGTGRESSFFVIEADEYDTAFFDKRSKFV 178 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR +TA+LNNLEYDHADIFPDLAAIETQFHHLVRTVPG+GR+I N RE +LQRV+ RGC Sbjct: 179 HYRAKTAILNNLEYDHADIFPDLAAIETQFHHLVRTVPGVGRMIANAREESLQRVIKRGC 238 Query: 241 WSEREDFGVAQGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAARH 300 WSE E FG ++ Q GW++ THDD FDVFF+G+ QGTV+W L GEHNRMNALAAIAAARH Sbjct: 239 WSETEWFG-SKEQDGWTMTTHDDDTFDVFFNGEKQGTVQWPLNGEHNRMNALAAIAAARH 297 Query: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 VGV AQAIA+LG F++VKRRMELRG N +AVYDDFAHHPTAIATTVAGLRKKVG ARI Sbjct: 298 VGVLPAQAIASLGQFENVKRRMELRGVVNDIAVYDDFAHHPTAIATTVAGLRKKVGTARI 357 Query: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAH-TGRDALGWDLGEALAPLGAKAAA 419 LAVLEPRSNTMKLGTMK ALPGSL DADLVFG+GA G+DALGWDL EALAPLG + +A Sbjct: 358 LAVLEPRSNTMKLGTMKAALPGSLLDADLVFGYGASGNGKDALGWDLAEALAPLGDRGSA 417 Query: 420 FDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 F DL ALV A+ A+PGD +LVMSNGGFGGVHQK+LD LA Sbjct: 418 FSDLNALVAAIAKNAQPGDQILVMSNGGFGGVHQKILDVLA 458 >ref|YP_004751439.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Collimonas fungivorans Ter331] gb|AEK60616.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Collimonas fungivorans Ter331] Length = 470 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/461 (79%), Positives = 403/461 (87%), Gaps = 3/461 (0%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLAK+AGH VTGCDANVYPPMSTQLEAQGI+L QGF Q L Sbjct: 1 MHIHILGICGTFMGGLAVLAKQAGHKVTGCDANVYPPMSTQLEAQGISLIQGFGVEQTGL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 +PDL+VIGNVV RGNPLMEEILNRGLPYVSGPQW+GE+IL+DKWVLAVAGTHGKTTTSAM Sbjct: 61 QPDLYVIGNVVVRGNPLMEEILNRGLPYVSGPQWIGEHILRDKWVLAVAGTHGKTTTSAM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AGY PGFLIGGVPMNFG+SARL P+ FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWILEDAGYDPGFLIGGVPMNFGISARLSGKEGAAPSSFFVIEADEYDTAFFDKRSKFV 180 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HY +TA+LNNLEYDHADIFPDLAAIETQFHHLVRT+PG+GRL+VN REPALQRVL RGC Sbjct: 181 HYHAKTAILNNLEYDHADIFPDLAAIETQFHHLVRTIPGVGRLVVNAREPALQRVLDRGC 240 Query: 241 WSEREDFGVAQGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAARH 300 WSE+E FG + GWSL T D+G F+V FDGQPQGTV+W L+GEHNRMNALAAIAAARH Sbjct: 241 WSEKEFFG--GDRQGWSLSTQDNGHFEVSFDGQPQGTVQWGLSGEHNRMNALAAIAAARH 298 Query: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 VGVP AQAI L F++VKRRMELRG+ +AVYDDFAHHPTAIATTVAGLRKKVGAARI Sbjct: 299 VGVPPAQAIETLSRFENVKRRMELRGTVREIAVYDDFAHHPTAIATTVAGLRKKVGAARI 358 Query: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAH-TGRDALGWDLGEALAPLGAKAAA 419 LAVLEPRSNTMKLG MK+ALPGSL +ADLVFG+GA TG+DAL WDL AL PLGAKA+ Sbjct: 359 LAVLEPRSNTMKLGAMKEALPGSLDEADLVFGYGASGTGKDALDWDLAAALQPLGAKAST 418 Query: 420 FDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 + +L LV A+ AARPGD VLVMSNGGFGGVHQK+L AL+ Sbjct: 419 YHELDQLVAAIAKAARPGDQVLVMSNGGFGGVHQKILAALS 459 >ref|ZP_08274963.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31569.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Oxalobacteraceae bacterium IMCC9480] Length = 461 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/461 (78%), Positives = 400/461 (86%), Gaps = 3/461 (0%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLA++AGH VTGCDANVYPPMSTQL+ QGI L +GFD Q+ L Sbjct: 1 MHIHILGICGTFMGGLAVLARQAGHRVTGCDANVYPPMSTQLQEQGIELIEGFDPEQISL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 PDLFVIGNVVSRGNPLME IL+RGLPY SGPQW+GE+IL+D+WVLAVAGTHGKTTT++M Sbjct: 61 APDLFVIGNVVSRGNPLMEAILDRGLPYTSGPQWIGEHILKDRWVLAVAGTHGKTTTASM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AGYQPGFLIGGVP+NFG+SARL G+GG + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWILEDAGYQPGFLIGGVPLNFGISARLA--GEGGESAFFVIEADEYDTAFFDKRSKFV 178 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RT VLNNLEYDHADIFPDL AIETQFHHLVRTVP IGRL+VN RE AL V+ RGC Sbjct: 179 HYRARTVVLNNLEYDHADIFPDLGAIETQFHHLVRTVPRIGRLLVNQREAALHTVIERGC 238 Query: 241 WSEREDFGVAQGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAARH 300 WSE E FG A +GW L H DG F V F G PQGTV W L GEHNRMNALAAIAAARH Sbjct: 239 WSEIEWFGGAADAAGWQLDEHADGSFTVIFHGAPQGTVHWMLNGEHNRMNALAAIAAARH 298 Query: 301 VGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAARI 360 VGVPVAQAIA+LGAFQ+V+RRMELRG + + V+DDFAHHPTAI TTVAGLR+ VG ARI Sbjct: 299 VGVPVAQAIASLGAFQNVRRRMELRGEVDAIRVFDDFAHHPTAITTTVAGLRQVVGTARI 358 Query: 361 LAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAH-TGRDALGWDLGEALAPLGAKAAA 419 LAVLEPRSNTMKLGTMK ALPGSLA+ADLVFG+GA G++ALGW+L EALAPLG KA A Sbjct: 359 LAVLEPRSNTMKLGTMKSALPGSLAEADLVFGYGAKGDGKNALGWNLAEALAPLGQKAQA 418 Query: 420 FDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 FDDL+ LV A+ AAARPGD +LVMSNGGFGGVHQK+LDALA Sbjct: 419 FDDLSELVAAIVAAARPGDQILVMSNGGFGGVHQKILDALA 459 >ref|ZP_07677802.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Ralstonia sp. 5_7_47FAA] gb|EFP63869.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Ralstonia sp. 5_7_47FAA] Length = 461 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/461 (75%), Positives = 390/461 (84%), Gaps = 8/461 (1%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGG+A++A++AGH VTGCDANVYPPMSTQLEAQGI L +GFD Q+ + Sbjct: 1 MHIHILGICGTFMGGIALIARQAGHRVTGCDANVYPPMSTQLEAQGIELIEGFDPEQLSI 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 DL+VIGNV+SRGNPLME IL+R LPY+SGPQW+G+N+L+ KWVLAVAGTHGKTTT++M Sbjct: 61 GADLYVIGNVISRGNPLMEAILDRNLPYISGPQWLGDNVLRQKWVLAVAGTHGKTTTTSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAWVL+ AGY PGFL+GGVP NFG+SARL + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWVLQDAGYNPGFLVGGVPRNFGLSARLTE------SNFFVIEADEYDTAFFDKRSKFV 174 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RTA+LNNLE+DHADIFPDLAAIETQFHHLVRTVPG GRL+VNGRE +L+RVL RGC Sbjct: 175 HYRPRTAILNNLEFDHADIFPDLAAIETQFHHLVRTVPGQGRLLVNGREDSLKRVLERGC 234 Query: 241 WSEREDFGVAQGQSGWSLLT-HDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAAAR 299 WSE E FG A+G SGW + DD FDV F+GQP G V W L G+HNRMNAL AIAAAR Sbjct: 235 WSEVEQFG-AEGGSGWKIANLSDDDSFDVVFNGQPLGRVRWALQGDHNRMNALGAIAAAR 293 Query: 300 HVGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGAAR 359 HVGVP AQAI +L F++VKRRME+RG+ N V VYDDFAHHPTAI TT+ GLR++VG R Sbjct: 294 HVGVPPAQAIESLARFENVKRRMEVRGTVNDVTVYDDFAHHPTAIRTTIEGLRRRVGEGR 353 Query: 360 ILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPLGAKAAA 419 ILAVLEPRSNTMKLG MKQALP SL+ AD +F +GA GRDA+GWDL ALAPLG +A A Sbjct: 354 ILAVLEPRSNTMKLGVMKQALPDSLSGADQIFAYGAANGRDAIGWDLAGALAPLGQRAKA 413 Query: 420 FDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 F DL ALV AV AAARPGDHVLVMSNGGFGGVHQKLLDALA Sbjct: 414 FSDLTALVDAVTAAARPGDHVLVMSNGGFGGVHQKLLDALA 454 >ref|ZP_02378464.1| UDP-N-acetylmuramate [Burkholderia ubonensis Bu] Length = 464 Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/466 (77%), Positives = 396/466 (84%), Gaps = 16/466 (3%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLA+ AGHTVTGCDA VYPPMSTQLEAQGI L +G+ A Q++L Sbjct: 1 MHIHILGICGTFMGGLAVLARAAGHTVTGCDAGVYPPMSTQLEAQGIQLIEGYGAEQIDL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 +PDLFVIGNVV+RGNPLME IL+RGLPYVSGPQW+GE++L KWVLAVAGTHGKTTTS+M Sbjct: 61 KPDLFVIGNVVTRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AG PGFLIGGVP+NFGVSARL + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWLLEDAGLNPGFLIGGVPLNFGVSARLTD------SSFFVIEADEYDTAFFDKRSKFV 174 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RTAVLNNLE+DHADIFPDLAAIETQFHHLVRTVPG+GRL+ NGRE AL+RVLARGC Sbjct: 175 HYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRLVSNGREAALERVLARGC 234 Query: 241 WSEREDFGVAQGQSGWSLLTHDDG-----RFDVFFDGQPQGTVEWQLTGEHNRMNALAAI 295 WSE E FGV GW L +DG RF V++ G+ G V WQ+ GEHNRMNALAAI Sbjct: 235 WSEVERFGV---DGGWQALAAEDGVPVDERFAVYWRGERLGEVAWQVQGEHNRMNALAAI 291 Query: 296 AAARHVGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKV 355 AAARHVGVP AQA A+L +F++VKRRME+RGS NGV VYDDFAHHPTAI TT+AGLR ++ Sbjct: 292 AAARHVGVPPAQAAASLASFRNVKRRMEVRGSVNGVTVYDDFAHHPTAIETTIAGLRARI 351 Query: 356 GA--ARILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPL 413 G ARILAVLEPRSNTMKLG MK LP SLADADLVFG+GA GRDALGW+LGEALAPL Sbjct: 352 GQQNARILAVLEPRSNTMKLGVMKSQLPASLADADLVFGYGAPAGRDALGWNLGEALAPL 411 Query: 414 GAKAAAFDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDAL 459 G KA AFDDL LV AV A ARPGDHVLVMSNGGFGGVHQKLLDAL Sbjct: 412 GGKAHAFDDLHQLVTAVVAVARPGDHVLVMSNGGFGGVHQKLLDAL 457 >ref|YP_002006634.1| UDP-N-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase [Cupriavidus taiwanensis LMG 19424] emb|CAQ70573.1| UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [Cupriavidus taiwanensis LMG 19424] Length = 462 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/463 (75%), Positives = 383/463 (82%), Gaps = 9/463 (1%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLAK+AGH VTGCDANVYPPMSTQLEAQGI L +GFD AQ+ L Sbjct: 1 MHIHILGICGTFMGGLAVLAKQAGHRVTGCDANVYPPMSTQLEAQGIELIEGFDPAQLSL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 EPDLFVIGNVVSRGNPLME IL+R LPYVSGPQW+GE++L KWVLAVAGTHGKTTT++M Sbjct: 61 EPDLFVIGNVVSRGNPLMEAILDRNLPYVSGPQWLGEHVLARKWVLAVAGTHGKTTTTSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AGY PGFL+GGVP NFG+SAR+ + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWILEDAGYNPGFLVGGVPQNFGISARVTE------SDFFVIEADEYDTAFFDKRSKFV 174 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RTA+LNNLEYDHADIFPDLAAIETQFHHLVRTVPG GR++VNG E +L RVL RGC Sbjct: 175 HYRPRTAILNNLEYDHADIFPDLAAIETQFHHLVRTVPGQGRIVVNGVEESLARVLERGC 234 Query: 241 WSEREDFGVA---QGQSGWSLLTHDDGRFDVFFDGQPQGTVEWQLTGEHNRMNALAAIAA 297 WSE E FGV + + + FDV+F GTV W L G HNRMNALAAI A Sbjct: 235 WSEVEQFGVGDWRESDAARTPAAPGKDAFDVWFGDAVAGTVVWDLQGTHNRMNALAAIGA 294 Query: 298 ARHVGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKVGA 357 ARHVGVP AQAI +L F +VKRRME+RG A GV VYDDFAHHPTAI TT+ GLR++VG Sbjct: 295 ARHVGVPAAQAIESLSRFANVKRRMEVRGVAGGVTVYDDFAHHPTAIQTTLDGLRRRVGN 354 Query: 358 ARILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPLGAKA 417 ARILAVLEPRSNTMKLG MK LP SL ADLVFG+GA G+DALGWDL EALAPLGA A Sbjct: 355 ARILAVLEPRSNTMKLGVMKAQLPASLEQADLVFGYGAPAGKDALGWDLAEALAPLGATA 414 Query: 418 AAFDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDALA 460 AF DL LVQAV+AAA+PGDHVLVMSNGGFGGVHQKLLDALA Sbjct: 415 TAFQDLGTLVQAVRAAAQPGDHVLVMSNGGFGGVHQKLLDALA 457 >ref|ZP_02907660.1| UDP-N-acetylmuramate [Burkholderia ambifaria MEX-5] gb|EDT41200.1| UDP-N-acetylmuramate [Burkholderia ambifaria MEX-5] Length = 461 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/466 (75%), Positives = 391/466 (83%), Gaps = 16/466 (3%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLA+EAGHTVTGCDA VYPPMSTQLEAQGITL +G+ A Q++L Sbjct: 1 MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 +PDLFVIGNVV+RGNPLME IL+RGLPYVSGPQW+GE++L KWVLAVAGTHGKTTTS+M Sbjct: 61 KPDLFVIGNVVTRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AG PGFLIGGVP+NFGVSARL + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWLLEDAGLNPGFLIGGVPLNFGVSARLTD------SSFFVIEADEYDTAFFDKRSKFV 174 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RTAVLNNLE+DHADIFPDLAAIETQFHHLVRTVPG+GRL+ NGR AL+RVLARGC Sbjct: 175 HYRPRTAVLNNLEFDHADIFPDLAAIETQFHHLVRTVPGVGRLVTNGRSDALERVLARGC 234 Query: 241 WSEREDFGVAQGQSGWSLLTHDDG-----RFDVFFDGQPQGTVEWQLTGEHNRMNALAAI 295 WSE E FGV GW L +DG RF V+ + G V WQ+ G+HNRMNALAAI Sbjct: 235 WSEVERFGV---DGGWQALPAEDGVPVDERFAVYSQSERVGAVAWQVQGDHNRMNALAAI 291 Query: 296 AAARHVGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKV 355 A ARHVGVP AQA +L +F++VKRRME+RGS +GV VYDDFAHHPTAI TT+AGLR ++ Sbjct: 292 ATARHVGVPPAQAAESLASFRNVKRRMEVRGSIDGVTVYDDFAHHPTAIETTIAGLRARI 351 Query: 356 GA--ARILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPL 413 G +RILAVLEPRSNTMKLG MK LP SLADADLVFG+GA GRD LGW+L +ALAPL Sbjct: 352 GRQNSRILAVLEPRSNTMKLGVMKAQLPTSLADADLVFGYGAPAGRDVLGWNLADALAPL 411 Query: 414 GAKAAAFDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDAL 459 G KA AFDDL LV++V AAR GDHVLVMSNGGFGGVHQKLLDAL Sbjct: 412 GDKARAFDDLHLLVKSVVEAARAGDHVLVMSNGGFGGVHQKLLDAL 457 >ref|YP_001118431.1| UDP-N-acetylmuramate [Burkholderia vietnamiensis G4] gb|ABO53596.1| UDP-N-acetylmuramate [Burkholderia vietnamiensis G4] Length = 461 Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/466 (77%), Positives = 398/466 (85%), Gaps = 16/466 (3%) Query: 1 MHIHILGICGTFMGGLAVLAKEAGHTVTGCDANVYPPMSTQLEAQGITLTQGFDAAQVEL 60 MHIHILGICGTFMGGLAVLA+EAGHTVTGCDA VYPPMSTQLEAQGITL +G+ A Q++L Sbjct: 1 MHIHILGICGTFMGGLAVLAREAGHTVTGCDAGVYPPMSTQLEAQGITLIEGYGAEQIDL 60 Query: 61 EPDLFVIGNVVSRGNPLMEEILNRGLPYVSGPQWMGENILQDKWVLAVAGTHGKTTTSAM 120 +PDLFVIGNVV+RGNPLME IL+RGLPYVSGPQW+GE++L KWVLAVAGTHGKTTTS+M Sbjct: 61 KPDLFVIGNVVTRGNPLMEAILDRGLPYVSGPQWLGEHVLAGKWVLAVAGTHGKTTTSSM 120 Query: 121 LAWVLEHAGYQPGFLIGGVPMNFGVSARLGSDGQGGPAPFFVIEADEYDTAFFDKRSKFV 180 LAW+LE AG PGFLIGGVP+NFGVSARL + FFVIEADEYDTAFFDKRSKFV Sbjct: 121 LAWLLEDAGLNPGFLIGGVPLNFGVSARLTD------SSFFVIEADEYDTAFFDKRSKFV 174 Query: 181 HYRTRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPGIGRLIVNGREPALQRVLARGC 240 HYR RTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVP +GR++ NGR AL+RVLARGC Sbjct: 175 HYRPRTAVLNNLEYDHADIFPDLAAIETQFHHLVRTVPRVGRIVTNGRSDALERVLARGC 234 Query: 241 WSEREDFGVAQGQSGWSLLTHDDG-----RFDVFFDGQPQGTVEWQLTGEHNRMNALAAI 295 WSE E FGV GW L +DG RF V+ Q G V WQ+ G+HNRMNALAAI Sbjct: 235 WSEVERFGV---DGGWQALPAEDGVPVDERFAVYSQAQRVGEVAWQVQGDHNRMNALAAI 291 Query: 296 AAARHVGVPVAQAIAALGAFQSVKRRMELRGSANGVAVYDDFAHHPTAIATTVAGLRKKV 355 AAARHVGVP AQA A+L +F++VKRRME+RGS +GV VYDDFAHHPTAI TT+AGLR ++ Sbjct: 292 AAARHVGVPPAQAAASLASFRNVKRRMEVRGSVDGVTVYDDFAHHPTAIETTIAGLRARI 351 Query: 356 GA--ARILAVLEPRSNTMKLGTMKQALPGSLADADLVFGFGAHTGRDALGWDLGEALAPL 413 G +RILAVLEPRSNTMKLG MK LP SLADADLVFG+GA +GRDALGW+LG+ALAPL Sbjct: 352 GREHSRILAVLEPRSNTMKLGVMKAQLPASLADADLVFGYGAPSGRDALGWNLGDALAPL 411 Query: 414 GAKAAAFDDLAALVQAVKAAARPGDHVLVMSNGGFGGVHQKLLDAL 459 GAKA AFDDL LV+AV AAARPGDHVLVMSNGGFGGVHQ+LLDAL Sbjct: 412 GAKAHAFDDLHLLVKAVVAAARPGDHVLVMSNGGFGGVHQQLLDAL 457