BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0053.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EFV82668.1| hypothetical protein HMPREF0005_00361 [Achromobac... 252 5e-65 ref|YP_004683879.1| hypothetical protein CNE_1c00290 [Cupriavidu... 211 7e-53 ref|YP_294251.1| hypothetical protein Reut_A0025 [Ralstonia eutr... 207 1e-51 ref|YP_001358606.1| hypothetical protein SUN_1296 [Sulfurovum sp... 182 5e-44 ref|ZP_04583636.1| conserved hypothetical protein [Helicobacter ... 181 1e-43 ref|YP_736903.1| hypothetical protein Shewmr7_0847 [Shewanella s... 177 1e-42 ref|YP_003743306.1| hypothetical protein EbC_39280 [Erwinia bill... 164 1e-38 ref|YP_048548.1| hypothetical protein ECA0430 [Pectobacterium at... 162 5e-38 ref|ZP_03829092.1| hypothetical protein PcarbP_20883 [Pectobacte... 161 9e-38 ref|YP_004393570.1| hypothetical protein B565_2918 [Aeromonas ve... 149 3e-34 >gb|EFV82668.1| hypothetical protein HMPREF0005_00361 [Achromobacter xylosoxidans C54] Length = 273 Score = 252 bits (643), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 127/267 (47%), Positives = 174/267 (65%), Gaps = 5/267 (1%) Query: 17 SAWGGAIDAIPTCYDNKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFLAPGN 76 +A+ GA + +P+CY+ VG P TELF+ +DQTT D L+ +N + PG+ Sbjct: 9 TAYAGAQNDVPSCYEASKVGVPAPAPRTELFILVDQTTPFDAMLQGLANENAGRLIQPGS 68 Query: 77 GFQVVTFSAYTQGHYTEVLASGKLDAPMEANRRNDVSKTALAKFDQCMGRQPQLAAQIAG 136 + V TFS++ QG Y +VL++G L+ P++ + RN + L FD CM Q A Sbjct: 69 AYVVATFSSFGQGRYMQVLSAGTLEQPIDESLRNSIGMKVLRTFDACMRDQLDYGRLKAA 128 Query: 137 GALRAAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSDMLENSSVSSFYADRG 196 AL+ AF G S E+AKSD+L++LK ++ R+S AR+ IV ++SDMLENSS+SSFYA+ Sbjct: 129 TALKTAFAGVSAELAKSDILSALKELSSRVRQSGARDMIVFVLSDMLENSSISSFYAN-- 186 Query: 197 HSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSKS---YRDPKTMQALA 253 H+VR I P+ E++ VE Q GDFGGARV+V+GAGL+ DG + YRDPKTM L Sbjct: 187 HNVRAIDPSVEIKKVEAAQQFGDFGGARVFVLGAGLVQGDGSARRDRGVYRDPKTMAKLR 246 Query: 254 TFWKTYLEKSGAQLVEFGQPALLSPIR 280 TFW+ Y +S AQLVEFG PALLSP+R Sbjct: 247 TFWELYFARSNAQLVEFGAPALLSPVR 273 >ref|YP_004683879.1| hypothetical protein CNE_1c00290 [Cupriavidus necator N-1] gb|AEI75398.1| hypothetical protein CNE_1c00290 [Cupriavidus necator N-1] Length = 298 Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 118/278 (42%), Positives = 173/278 (62%), Gaps = 9/278 (3%) Query: 7 LFLAAGLFSGSAWGGAIDAIPTCYDNKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVAD 66 L +A + G A+ A IP+CY +G+PT LF+ IDQTT LD L + Sbjct: 26 LAVATTMLCGPAF--AAPEIPSCYVANQLGSPTAA-QRALFLMIDQTTALDDKLVSELGR 82 Query: 67 NLKPFLAPGNGFQVVTFSAYTQGHYTEVLASGKLDAPM-EANRRNDVSKTALAKFDQCMG 125 +L+ L PG F+V +FSAY QG Y + A+G L+AP+ + + R+ + L FD C+ Sbjct: 83 HLQGLLRPGTTFRVYSFSAYAQGRYLQQRAAGTLEAPLVDQSLRDATAVKTLKNFDACLK 142 Query: 126 RQPQLAAQIAGGALRAAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSDMLEN 185 Q ++ ++R A G+S +A+SDVLAS+ A++ R + A+ K VL+VSDMLEN Sbjct: 143 SQYAYGTKLVAESVREALQGSSEALARSDVLASIAAVSQAVRDTAAQQKTVLIVSDMLEN 202 Query: 186 SSVSSFYADRGHSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSE-DGKKS--KS 242 SS+SSFY+ +R+I +E++ VE+ + DFGGA VYV+GAG++ E G +S S Sbjct: 203 SSISSFYSQ--ERMRQIDAVQELRKVEKANVRADFGGASVYVMGAGIVPEPKGARSAAAS 260 Query: 243 YRDPKTMQALATFWKTYLEKSGAQLVEFGQPALLSPIR 280 YR P++++AL TFW + E+S A+LV FG PALL+PIR Sbjct: 261 YRSPQSIEALRTFWDGFFERSNARLVGFGAPALLTPIR 298 >ref|YP_294251.1| hypothetical protein Reut_A0025 [Ralstonia eutropha JMP134] gb|AAZ59407.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 298 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 112/272 (41%), Positives = 167/272 (61%), Gaps = 9/272 (3%) Query: 13 LFSGSAWGGAIDAIPTCYDNKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFL 72 + GSA+ A +P+CY + P V + +FV IDQTT+LD L + +L+ L Sbjct: 32 MLCGSAF--AAQDMPSCYAANQLARPAAV-ERAVFVMIDQTTVLDDKLAAELGRHLQSLL 88 Query: 73 APGNGFQVVTFSAYTQGHYTEVLASGKLDAPM-EANRRNDVSKTALAKFDQCMGRQPQLA 131 PG F+V +FSAY QG Y + L +G L+ P+ + + R+ + L FD C+ Q Sbjct: 89 RPGTTFRVYSFSAYAQGRYLQQLTAGMLEVPLTDQSIRDATAVKTLKSFDACLKSQYTYG 148 Query: 132 AQIAGGALRAAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSDMLENSSVSSF 191 ++ ++R A GTS +A+SDVLAS+ A++ + R A+ K VL+VSDMLENSS+SSF Sbjct: 149 TKLVAESVREALQGTSEALARSDVLASVAAVSQVVRDVAAQQKTVLIVSDMLENSSISSF 208 Query: 192 YADRGHSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDG---KKSKSYRDPKT 248 Y+ +R+I +E++ V++ L DFGGA VYV+GAG++ E + SYR P++ Sbjct: 209 YSQ--ERMRQIDATQELRKVQKANLRADFGGASVYVMGAGIVPEPKGARNAAASYRSPQS 266 Query: 249 MQALATFWKTYLEKSGAQLVEFGQPALLSPIR 280 ++AL TFW + E+S A+L FG PALL+PIR Sbjct: 267 VEALRTFWDGFFERSNARLAGFGAPALLTPIR 298 >ref|YP_001358606.1| hypothetical protein SUN_1296 [Sulfurovum sp. NBC37-1] dbj|BAF72249.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 269 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 101/260 (38%), Positives = 160/260 (61%), Gaps = 8/260 (3%) Query: 22 AIDAIPTCYDNKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFLAPGNGFQVV 81 A + +P+CY + P ++ ELF+ +DQTT LD + N+ F+ G + Sbjct: 17 ARNDVPSCYKALQIENPNPAVEKELFILVDQTTPLDKNMMIYTYKNMMKFIKNGYAVTIA 76 Query: 82 TFSAYTQGHYTEVLASGKLDAPMEANRRNDVSKTALAKFDQCMGRQPQLAAQIAGGALRA 141 +FSA +G YT+V SG L+A + + +++++K L K+ CM Q + A + A AL Sbjct: 77 SFSANAKGKYTDVPYSGSLEALLPESAKHEIAKKKLRKYQACMNGQYKYAKKKATKALVR 136 Query: 142 AFDGTSGEIAKSDVLASLKAIAD-LSRKSKARNKIVLLVSDMLENSSVSSFYADRGHSVR 200 G + ++ SD+L SL IA+ + + SKA+ K+VLLVSDM+E+SS++SFY+ +G S+R Sbjct: 137 TLKGANKKLPHSDILKSLDDIAEHIIKPSKAKEKVVLLVSDMMEHSSITSFYS-KG-SLR 194 Query: 201 KIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSKSYRDPKTMQALATFWKTYL 260 +I KEM ++++ DF GARVY+IGAG++ ++ SYRD KT++AL +FW+TY Sbjct: 195 RIDTKKEMAKLQKSGYTADFDGARVYIIGAGMVGKN-----SYRDSKTLKALTSFWETYF 249 Query: 261 EKSGAQLVEFGQPALLSPIR 280 + S A+L G P LL I+ Sbjct: 250 KVSNARLQAIGTPMLLEDIK 269 >ref|ZP_04583636.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gb|EEO25514.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 267 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 105/264 (39%), Positives = 152/264 (57%), Gaps = 12/264 (4%) Query: 19 WGGAIDAIPT-CYDNKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFLAPGNG 77 +G ++A P CY+ + ++DT +FV ID+TTL D LK + N F+ N Sbjct: 14 FGITLNATPKGCYEIYKLD-KQNIIDTAIFVLIDETTLFDQNLKDQIISNALSFVESSNH 72 Query: 78 FQVVTFSAYTQGHYTEVLASGKLDAPMEANRRNDVSKTALAKFDQCMGRQPQLAAQIAGG 137 + FSA G Y E L LD + R D++K+ L K D+C+ Q + Sbjct: 73 IYIGKFSALIGGKYNETLFDFSLDTHLSNQERYDINKSMLNKIDKCLNDQIGFVRKNTKK 132 Query: 138 ALRAAFDGTSGEIAKSDVLASLKAIA-DLSRKSKARNKIVLLVSDMLENSSVSSFYADRG 196 ++ +F GT+ +IAKSD+L +LK A + A+ KIV+L SDMLENS+++SFYA+ Sbjct: 133 SIEGSF-GTN-DIAKSDILYALKDFAKSVIAPLNAKRKIVILASDMLENSAITSFYAN-- 188 Query: 197 HSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSKSYRDPKTMQALATFW 256 ++VR+I KE+ +V +N L GDFGGA V++IGAG+ S+ KSY +PK + +L FW Sbjct: 189 NAVRQIDSNKELSIVAKNDLFGDFGGAEVFIIGAGISSK-----KSYVNPKMLASLTNFW 243 Query: 257 KTYLEKSGAQLVEFGQPALLSPIR 280 + Y KS A L G PAL S IR Sbjct: 244 QEYFAKSNATLKNIGTPALKSAIR 267 >ref|YP_736903.1| hypothetical protein Shewmr7_0847 [Shewanella sp. MR-7] gb|ABI41846.1| conserved hypothetical protein [Shewanella sp. MR-7] Length = 285 Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 103/278 (37%), Positives = 157/278 (56%), Gaps = 12/278 (4%) Query: 5 SALFLAAGLFSGS--AWGGAIDAIPTCYDNKMVGAPTG--VLDTELFVAIDQTTLLDGGL 60 S LF + SG G + I +CYD + T V LFVA+D T D + Sbjct: 13 SGLFSTISIVSGCLPVIAGERNDIKSCYDFAKIEPSTAKVVSGRHLFVAVDGTFSPDINI 72 Query: 61 KQSVADNLKPFLAPGNGFQVVTFSAYTQGHYTEVLASGKLDAPMEANRRNDVSKTALAKF 120 K+ V + + FL PG+ +++FSAY + YT+VL SG+LD + R+DVSK +L F Sbjct: 73 KKLVHEKVHLFLQPGDKITIISFSAYVKDFYTDVLFSGRLDT--DIADRDDVSKKSLMTF 130 Query: 121 DQCMGRQPQLAAQIAGGALRAAFDGTSGEIAKSDVLASL-KAIADLSRKSKARNKIVLLV 179 D CM +Q Q ++ AF ++ K++++ +L + IA ++ +++LLV Sbjct: 131 DNCMAKQTQFVKTKVDTHIKNAFKPNDADVPKTEIITNLSQVIAPQVAVNQGERRVLLLV 190 Query: 180 SDMLENSSVSSFYADRGHSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKK 239 SDM+ENS V+SFY+ ++++ IAP +E+Q V++ +L DF A +YV+GAG + Sbjct: 191 SDMVENSDVTSFYS--KNTLKVIAPEQEIQKVQKANMLSDFKQADIYVLGAGWVPA---T 245 Query: 240 SKSYRDPKTMQALATFWKTYLEKSGAQLVEFGQPALLS 277 SK +R + M L FW+ Y E S AQL EFGQP L+S Sbjct: 246 SKGFRGGQVMLPLKQFWQQYFEASNAQLKEFGQPVLMS 283 >ref|YP_003743306.1| hypothetical protein EbC_39280 [Erwinia billingiae Eb661] emb|CAX61459.1| Uncharacterized protein [Erwinia billingiae Eb661] Length = 276 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/279 (38%), Positives = 151/279 (54%), Gaps = 8/279 (2%) Query: 4 WSALFLAAGLFSGSAWGGAIDAIPTCYD-NKMVGAPTGVLDTELFVAIDQTTLLDGGLKQ 62 W AL L GL G D IP+CY +K+ EL + +DQT + LK+ Sbjct: 4 WLALILL-GLSCGIHAADRND-IPSCYHYSKLDAERPAESGRELVIVVDQTVKIPLDLKK 61 Query: 63 SVADNLKPFLAPGNGFQVVTFSAYTQGHYTEVLASGKLDAPMEANR-RNDVSKTALAKFD 121 SV ++ ++ PG+ + FSA Q +Y + + GKL+A + RN++ +L D Sbjct: 62 SVWQHVIRYVQPGDRVVMYQFSALLQDNYMKRVFDGKLEALFTDQKARNNMGMESLKNLD 121 Query: 122 QCMGRQPQLAAQIAGGALRAAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSD 181 C+ +Q Q Q G L A+F IAKS++L SLK IA+ + A +K V+LVSD Sbjct: 122 ACLIKQKQYFDQGIGKLLAASFAAEGDNIAKSEILDSLKRIAEDLKSDPAPDKSVVLVSD 181 Query: 182 MLENSSVSSFYADRGHSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSK 241 MLENS SFY++ + +R +AP KE+ V + L+ DF GA+VYV GAGL+ K Sbjct: 182 MLENSDFGSFYSN--NQIRLLAPDKELARVTKQNLIADFSGAKVYVAGAGLIDTSAK--N 237 Query: 242 SYRDPKTMQALATFWKTYLEKSGAQLVEFGQPALLSPIR 280 +YR K MQ L FW+ Y S A+LV FG P L I+ Sbjct: 238 NYRSGKIMQQLEGFWQQYFTASNAELVSFGAPELTVEIK 276 >ref|YP_048548.1| hypothetical protein ECA0430 [Pectobacterium atrosepticum SCRI1043] emb|CAG73345.1| putative exported protein [Pectobacterium atrosepticum SCRI1043] Length = 276 Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 142/255 (55%), Gaps = 12/255 (4%) Query: 26 IPTCYD----NKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFLAPGNGFQVV 81 IP+CY ++ A +G EL V +DQT + LK+S+ + + ++ PG+ + Sbjct: 24 IPSCYSFAKLDQHRPADSG---RELVVIVDQTVKVPVDLKKSIWNQVVRYVQPGDHVVMY 80 Query: 82 TFSAYTQGHYTEVLASGKLDAPMEANR-RNDVSKTALAKFDQCMGRQPQLAAQIAGGALR 140 FSA Q +Y + + GKL+ P ++ RN + +L D C+ +Q Q AQ G + Sbjct: 81 QFSALLQDNYMKRVFDGKLEMPFTDHKVRNSLGMDSLKSLDGCLVQQRQFFAQNIGKKMA 140 Query: 141 AAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSDMLENSSVSSFYADRGHSVR 200 +F IAKS+++ SLK I D +++ A +K +LLVSDMLENS SFY++ +S+R Sbjct: 141 ESFADRGDNIAKSEIMDSLKHIGDDLKETPASSKTILLVSDMLENSEFGSFYSN--NSIR 198 Query: 201 KIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSKSYRDPKTMQALATFWKTYL 260 + P KEM + L+ DF GA VY+ GAGL+ D K +YR K MQ L FW+ Y Sbjct: 199 LLEPEKEMARAGKQNLVADFTGANVYIAGAGLIDTDSK--NNYRSGKIMQQLEIFWRQYF 256 Query: 261 EKSGAQLVEFGQPAL 275 S A +V FG P L Sbjct: 257 AASKATVVSFGAPEL 271 >ref|ZP_03829092.1| hypothetical protein PcarbP_20883 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 276 Score = 161 bits (408), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 96/255 (37%), Positives = 142/255 (55%), Gaps = 12/255 (4%) Query: 26 IPTCYD----NKMVGAPTGVLDTELFVAIDQTTLLDGGLKQSVADNLKPFLAPGNGFQVV 81 IP+CY ++ A +G EL V +DQT + LK+S+ + + ++ PG+ + Sbjct: 24 IPSCYSFAKLDQHRPADSG---RELVVIVDQTVKVPVELKKSIWNQVVRYVQPGDHVVMY 80 Query: 82 TFSAYTQGHYTEVLASGKLDAPMEANR-RNDVSKTALAKFDQCMGRQPQLAAQIAGGALR 140 FSA Q +Y + + GKL+ P + RN + +L D C+ +Q Q AQ G + Sbjct: 81 QFSALLQDNYMKRVFDGKLEMPFTDQKVRNSLGMDSLKSLDGCLVQQRQFFAQNIGKKMA 140 Query: 141 AAFDGTSGEIAKSDVLASLKAIADLSRKSKARNKIVLLVSDMLENSSVSSFYADRGHSVR 200 +F IAKS+++ SLK I D +++ A +K +LLVSDMLENS SFY++ +S+R Sbjct: 141 ESFAERGDNIAKSEIMDSLKRIGDDLKETSAASKTILLVSDMLENSEFGSFYSN--NSIR 198 Query: 201 KIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDGKKSKSYRDPKTMQALATFWKTYL 260 + P KEM + +L+ DF GA VY+ GAGL+ D K +YR K MQ L FW+ Y Sbjct: 199 LLEPEKEMARAGKQKLVADFTGANVYIAGAGLIDTDSK--NNYRSGKIMQQLEVFWRQYF 256 Query: 261 EKSGAQLVEFGQPAL 275 S A +V FG P L Sbjct: 257 AASKATVVSFGAPEL 271 >ref|YP_004393570.1| hypothetical protein B565_2918 [Aeromonas veronii B565] gb|AEB50953.1| Putative exported protein [Aeromonas veronii B565] Length = 277 Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 145/278 (52%), Gaps = 12/278 (4%) Query: 3 KWSALFLAAGLFSGSAWGGAIDAIPTCYDNK----MVGAPTGVLDTELFVAIDQTTLLDG 58 K + + L A +A + I +CY+ M A TG EL V IDQT + Sbjct: 2 KITHILLLALTLPCAALAAERNDIQSCYERNGLADMKPAGTG---RELVVIIDQTIPMPE 58 Query: 59 GLKQSVADNLKPFLAPGNGFQVVTFSAYTQGHYTEVLASGKLDAPMEANRRNDVSKTALA 118 L++S ++ F+ G+ ++ TFSA+ G Y + +G+LD P+E R+DVS L Sbjct: 59 DLQRSSWGQIERFVQAGDRVKLYTFSAFLPGEYLRLTYAGQLDMPLEGEVRDDVSMRKLR 118 Query: 119 KFDQCMGRQPQLAAQIAGGALRAAFDGTSGEIAKSDVLASLKAIA-DLSRKSKARNKIVL 177 D C+ Q ++ G A +I KS+++ SL+ + D+ + +++V Sbjct: 119 GLDTCLTTQTKVFRNGFGKQFVKALRDARQDIPKSEIMNSLRKVGEDMKAEQGVSDRVVF 178 Query: 178 LVSDMLENSSVSSFYADRGHSVRKIAPAKEMQLVEQNQLLGDFGGARVYVIGAGLLSEDG 237 L+SDMLE+S +SFYA + ++++ E++ + L D GARVYV GAGL+++ Sbjct: 179 LISDMLEHSDYTSFYA--TNKIKQLNVGDELKQAKSKGLFADLQGARVYVTGAGLVTDAV 236 Query: 238 KKSKSYRDPKTMQALATFWKTYLEKSGAQLVEFGQPAL 275 K +YR KTM AL FW Y E S A LV FG P+L Sbjct: 237 K--HAYRSGKTMDALGDFWSQYFEHSHATLVNFGAPSL 272