BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0044.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspir... 340 5e-92 ref|YP_004751377.1| Iron-binding ferritin-like antioxidant prote... 292 1e-77 ref|YP_001894362.1| ferritin [Burkholderia phytofirmans PsJN] >g... 282 1e-74 ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134] >g... 282 1e-74 ref|YP_001858738.1| Ferritin Dps family protein [Burkholderia ph... 281 2e-74 ref|YP_002006575.1| DNA-binding protein, dps family [Cupriavidus... 281 2e-74 ref|YP_003905735.1| Ferritin Dps family protein [Burkholderia sp... 280 4e-74 ref|YP_557067.1| ferritin DPS family DNA-binding protein [Burkho... 280 4e-74 ref|YP_585082.1| metalloregulation DNA-binding stress protein [C... 280 5e-74 ref|ZP_03269214.1| Ferritin Dps family protein [Burkholderia sp.... 280 6e-74 >ref|YP_003773864.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1] emb|CAM32646.1| DNA-binding ferritin-like protein (oxidative damage protectant) protein [Herbaspirillum seropedicae] gb|ADJ61956.1| DNA-binding ferritin-like protein [Herbaspirillum seropedicae SmR1] Length = 164 Score = 340 bits (871), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA Sbjct: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 164 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG Sbjct: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLEG 164 >ref|YP_004751377.1| Iron-binding ferritin-like antioxidant protein [Collimonas fungivorans Ter331] gb|AEK60554.1| Iron-binding ferritin-like antioxidant protein [Collimonas fungivorans Ter331] Length = 187 Score = 292 bits (747), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 140/163 (85%), Positives = 148/163 (90%), Gaps = 2/163 (1%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 M KK+VA I+IGI+DKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 26 MVKKSVAV--IDIGISDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 83 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QYNEL LAVDLIAERIRALGYPAP +YK F+KL+SI E +GVPNA MI QLV GQEA Sbjct: 84 ETQYNELWLAVDLIAERIRALGYPAPATYKAFSKLTSITEEEGVPNATAMIQQLVQGQEA 143 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLLE 163 VTRTARSIFP VDAA+DEPTADLLTQRMQLHEKNAWMLRSLLE Sbjct: 144 VTRTARSIFPVVDAASDEPTADLLTQRMQLHEKNAWMLRSLLE 186 >ref|YP_001894362.1| ferritin [Burkholderia phytofirmans PsJN] gb|ACD15138.1| Ferritin Dps family protein [Burkholderia phytofirmans PsJN] Length = 165 Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 137/164 (83%), Positives = 146/164 (89%), Gaps = 2/164 (1%) Query: 1 MAKKNVAAP--SINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHL 58 MAKK AA +NIGI+DKDRKKIA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHL Sbjct: 1 MAKKEAAAAVQHVNIGISDKDRKKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHL 60 Query: 59 MFEGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQ 118 MFE QYNELALAVD IAERIRALG APGSYKEFAKLSSIPEADGVP A+EMI QLV GQ Sbjct: 61 MFETQYNELALAVDSIAERIRALGVHAPGSYKEFAKLSSIPEADGVPAAEEMIRQLVEGQ 120 Query: 119 EAVTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 EAV RTAR+IFP+ +AA DEPTADLLTQRMQ HEK AWMLRS+L Sbjct: 121 EAVVRTARAIFPSTEAANDEPTADLLTQRMQTHEKTAWMLRSML 164 >ref|YP_297009.1| Ferritin and Dps [Ralstonia eutropha JMP134] gb|AAZ62165.1| Ferritin and Dps [Ralstonia eutropha JMP134] Length = 161 Score = 282 bits (721), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 135/162 (83%), Positives = 146/162 (90%), Gaps = 2/162 (1%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKKN S+NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QYNELALAVD IAERIRALGYPAPG+YKE+A+LSSI E +GVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIQEEEGVPEATEMIRKLVEGQEA 118 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 V RTARSIFP VDAA+DEP+ADLLTQRMQ HEK AWMLRS+L Sbjct: 119 VVRTARSIFPLVDAASDEPSADLLTQRMQTHEKTAWMLRSML 160 >ref|YP_001858738.1| Ferritin Dps family protein [Burkholderia phymatum STM815] gb|ACC71692.1| Ferritin Dps family protein [Burkholderia phymatum STM815] Length = 162 Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 136/162 (83%), Positives = 144/162 (88%), Gaps = 1/162 (0%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKK A P +NIGI+DKDRKKIA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKE-AVPHVNIGISDKDRKKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 59 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QY ELA AVDLIAERIRALG APGSYKEFAKLSSI EADGVP A++MI QLV GQEA Sbjct: 60 ETQYTELATAVDLIAERIRALGVAAPGSYKEFAKLSSIAEADGVPAAEDMIRQLVEGQEA 119 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 V RTAR+IFP DAA DEPTADLLTQRMQ HEKNAWMLRS+L Sbjct: 120 VVRTARAIFPVTDAAHDEPTADLLTQRMQTHEKNAWMLRSML 161 >ref|YP_002006575.1| DNA-binding protein, dps family [Cupriavidus taiwanensis LMG 19424] emb|CAQ70514.1| putative DNA-binding protein, dps family [Cupriavidus taiwanensis LMG 19424] Length = 161 Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 134/162 (82%), Positives = 145/162 (89%), Gaps = 2/162 (1%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKKN S+NIGI+DKDRKKIA+GLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QYNELALAVD IAERIRALGYPAPG+YKE+A+LSSI E +GVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDSIAERIRALGYPAPGTYKEYARLSSIAEEEGVPEATEMIRKLVEGQEA 118 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 V RTARSIFP +DAA DEP+ADLLTQRMQ HEK AWMLRS+L Sbjct: 119 VVRTARSIFPVIDAAGDEPSADLLTQRMQTHEKTAWMLRSML 160 >ref|YP_003905735.1| Ferritin Dps family protein [Burkholderia sp. CCGE1003] ref|YP_004226949.1| Ferritin Dps family protein [Burkholderia sp. CCGE1001] gb|ADN56444.1| Ferritin Dps family protein [Burkholderia sp. CCGE1003] gb|ADX53889.1| Ferritin Dps family protein [Burkholderia sp. CCGE1001] Length = 162 Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 135/162 (83%), Positives = 146/162 (90%), Gaps = 1/162 (0%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKK A +NIGI+DKDRKKIA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKE-AVQHVNIGISDKDRKKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 59 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QYNELALAVD IAERIRALG APGSYK+FAKLSSIPEADGVP+A+EMI QLV GQEA Sbjct: 60 ETQYNELALAVDSIAERIRALGVHAPGSYKDFAKLSSIPEADGVPSAEEMIRQLVEGQEA 119 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 V RTAR+IFP+ +AA DEPTADLLTQRMQ HEK AWMLRS+L Sbjct: 120 VVRTARAIFPSTEAANDEPTADLLTQRMQTHEKTAWMLRSML 161 >ref|YP_557067.1| ferritin DPS family DNA-binding protein [Burkholderia xenovorans LB400] gb|ABE29015.1| Putative ferritin DPS-family DNA binding protein [Burkholderia xenovorans LB400] Length = 165 Score = 280 bits (717), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 135/164 (82%), Positives = 146/164 (89%), Gaps = 2/164 (1%) Query: 1 MAKKNVAAP--SINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHL 58 MAKK +A +NIGI+DKDRKKIA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHL Sbjct: 1 MAKKEASAAVQHVNIGISDKDRKKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHL 60 Query: 59 MFEGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQ 118 MFE QYNELALAVD IAERIRALG APGSYKEFA+LSSIPEADGVP A+EMI QLV GQ Sbjct: 61 MFETQYNELALAVDSIAERIRALGVHAPGSYKEFARLSSIPEADGVPAAEEMIRQLVEGQ 120 Query: 119 EAVTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 EAV RTAR+IFP+ +AA DEPTADLLTQRMQ HEK AWMLRS+L Sbjct: 121 EAVVRTARAIFPSTEAANDEPTADLLTQRMQTHEKTAWMLRSML 164 >ref|YP_585082.1| metalloregulation DNA-binding stress protein [Cupriavidus metallidurans CH34] gb|ABF09813.1| DNA protection during starvation or oxydative stress transcription regulator protein; Metalloregulation DNA-binding stress protein [Cupriavidus metallidurans CH34] Length = 161 Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 134/162 (82%), Positives = 144/162 (88%), Gaps = 2/162 (1%) Query: 1 MAKKNVAAPSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 60 MAKKN S+NIGI+DKDRKKIA+GL KLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF Sbjct: 1 MAKKN--EMSVNIGISDKDRKKIAEGLCKLLADTYTLYLKTHNFHWNVTGPMFNTLHLMF 58 Query: 61 EGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQEA 120 E QYNELALAVD IAERIRALGYPAPG+YKE+AKLSSI E +GVP A EMI +LV GQEA Sbjct: 59 ETQYNELALAVDAIAERIRALGYPAPGTYKEYAKLSSIAEEEGVPEATEMIRKLVEGQEA 118 Query: 121 VTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 V RTARS+FP +DAA DEP+ADLLTQRMQ HEK AWMLRSLL Sbjct: 119 VVRTARSLFPAIDAAGDEPSADLLTQRMQTHEKTAWMLRSLL 160 >ref|ZP_03269214.1| Ferritin Dps family protein [Burkholderia sp. H160] gb|EDZ99194.1| Ferritin Dps family protein [Burkholderia sp. H160] Length = 164 Score = 280 bits (715), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 136/163 (83%), Positives = 146/163 (89%), Gaps = 1/163 (0%) Query: 1 MAKKNVAA-PSINIGINDKDRKKIADGLSKLLADTYTLYLKTHNFHWNVTGPMFNTLHLM 59 MAKK AA +NIGI+DKDRKKIA+GLS+LLADTYTLYLKTHNFHWNVTGPMFNTLHLM Sbjct: 1 MAKKEAAAVQHVNIGISDKDRKKIAEGLSRLLADTYTLYLKTHNFHWNVTGPMFNTLHLM 60 Query: 60 FEGQYNELALAVDLIAERIRALGYPAPGSYKEFAKLSSIPEADGVPNAQEMIAQLVAGQE 119 FE QYNELALAVD IAERIRALG APGSYK+FAKLSSIPEADGVP A++MI QLV GQE Sbjct: 61 FETQYNELALAVDSIAERIRALGVHAPGSYKDFAKLSSIPEADGVPAAEDMIRQLVEGQE 120 Query: 120 AVTRTARSIFPTVDAAADEPTADLLTQRMQLHEKNAWMLRSLL 162 AV RTAR+IFP+ +AA DEPTADLLTQRMQ HEK AWMLRSLL Sbjct: 121 AVVRTARAIFPSTEAANDEPTADLLTQRMQTHEKTAWMLRSLL 163