BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0023.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773885.1| hypothetical protein Hsero_0452 [Herbaspiril... 467 e-130 ref|YP_003776528.1| hypothetical protein Hsero_3136 [Herbaspiril... 94 2e-17 ref|ZP_04942440.1| hypothetical protein BCPG_03980 [Burkholderia... 89 5e-16 ref|ZP_03571886.1| conserved hypothetical protein [Burkholderia ... 87 1e-15 gb|EGH12624.1| hypothetical protein PSYMP_21681 [Pseudomonas syr... 87 2e-15 ref|ZP_03588321.1| conserved hypothetical protein [Burkholderia ... 87 3e-15 ref|YP_003750648.1| hypothetical protein RPSI07_mp1733 [Ralstoni... 85 9e-15 gb|EGH82900.1| hypothetical protein PLA107_07211 [Pseudomonas sy... 84 2e-14 gb|EFW82597.1| hypothetical protein PsgB076_01179 [Pseudomonas s... 82 5e-14 ref|ZP_05636633.1| hypothetical protein PsyrptA_04950 [Pseudomon... 82 5e-14 >ref|YP_003773885.1| hypothetical protein Hsero_0452 [Herbaspirillum seropedicae SmR1] gb|ADJ61977.1| hypothetical protein Hsero_0452 [Herbaspirillum seropedicae SmR1] Length = 230 Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/230 (100%), Positives = 230/230 (100%) Query: 1 MPVAKAYLTQLFLSTLYMLALFGSIMAAVLTLPLVVPASLEQQLGVQPWMDQAASEPGEL 60 MPVAKAYLTQLFLSTLYMLALFGSIMAAVLTLPLVVPASLEQQLGVQPWMDQAASEPGEL Sbjct: 1 MPVAKAYLTQLFLSTLYMLALFGSIMAAVLTLPLVVPASLEQQLGVQPWMDQAASEPGEL 60 Query: 61 YCILGAILACVLGLFYRSMNRVVAPAKAGPRLNYQTATLLYMLAMSYGLAIFVTTGLAPQ 120 YCILGAILACVLGLFYRSMNRVVAPAKAGPRLNYQTATLLYMLAMSYGLAIFVTTGLAPQ Sbjct: 61 YCILGAILACVLGLFYRSMNRVVAPAKAGPRLNYQTATLLYMLAMSYGLAIFVTTGLAPQ 120 Query: 121 YRDCETYTQKLNGGVRQYRGLSFRVELCGAGPRESDRLDRVRLRIYDESGDLRAVRYFGV 180 YRDCETYTQKLNGGVRQYRGLSFRVELCGAGPRESDRLDRVRLRIYDESGDLRAVRYFGV Sbjct: 121 YRDCETYTQKLNGGVRQYRGLSFRVELCGAGPRESDRLDRVRLRIYDESGDLRAVRYFGV 180 Query: 181 QWGRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQTRIPLLD 230 QWGRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQTRIPLLD Sbjct: 181 QWGRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQTRIPLLD 230 >ref|YP_003776528.1| hypothetical protein Hsero_3136 [Herbaspirillum seropedicae SmR1] gb|ADJ64620.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 198 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 17/160 (10%) Query: 82 VVAPAKAGPRLNYQTATLLYMLAMSYGLAIFVTTGLA-------PQYRDCETYTQ--KLN 132 V A+ P + QT T+ + +GLA+ V+ L P Y C+ Y + L+ Sbjct: 44 VAVAAQPQPWRDMQTRTVKF-----FGLALLVSLALGLIIHFTRPHYGRCDFYNRPDTLD 98 Query: 133 GGVRQYRGLSFRVELCGAGPRESDRLD-RVRLRIYDESGDLRAVRYFGVQW--GRDFPAL 189 GGV+ G S+R ++CG G + D D ++ L+++++ G L A RYF V W G+ F Sbjct: 99 GGVKLLNGTSYRFQMCGTGGNDQDGTDDKIELKVFNDQGTLLARRYFSVNWYAGKGFHQP 158 Query: 190 LEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQTRIPLL 229 L Y D + Y D + ++ + +++PPT DW++ R+PL Sbjct: 159 LTYENDSVRYIDVTENSEYEKRLSIPPTKWDWIRARLPLF 198 >ref|ZP_04942440.1| hypothetical protein BCPG_03980 [Burkholderia cenocepacia PC184] gb|EAY65611.1| hypothetical protein BCPG_03980 [Burkholderia cenocepacia PC184] Length = 226 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 15/184 (8%) Query: 52 QAASEPGELYCILGAILACVLGLFYRSMNRVVAPAKAGPRLNYQTATLLYMLAMSYGLAI 111 A + ++ I I L R+ NR +AG + TL++ LA Y + Sbjct: 48 SAMNTKRAIFAIPSIIFGFYLYRLVRNFNRFSRAKRAGVAI----VTLIF-LAFVYLVGF 102 Query: 112 FVTTGLAPQYRDCE--TYTQKLNGGVRQYRGLSFRVELCGAGPRES----DRLDRVRLRI 165 G+ DC+ Y K+NGG++Q G+++ +++CG+G R + D+ ++V+L + Sbjct: 103 ---RGVMIDGTDCQRFNYDVKMNGGMKQVDGITYIIKICGSGVRSNGFFGDQNEQVKLVV 159 Query: 166 YDESGDLRAVRYFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQT 224 D G A R F V W GR ++ L YFDA DE+D R I++PPT+ DWV Sbjct: 160 SDVHGSTLATRLFFVFWDGRPGEDSTIVRKNKLIYFDASDEDDNERSISLPPTILDWVAA 219 Query: 225 RIPL 228 RIP+ Sbjct: 220 RIPI 223 >ref|ZP_03571886.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] ref|ZP_03578118.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gb|EEE07324.1| conserved hypothetical protein [Burkholderia multivorans CGD2] gb|EEE13694.1| conserved hypothetical protein [Burkholderia multivorans CGD2M] Length = 226 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 10/140 (7%) Query: 96 TATLLYMLAMSYGLAIFVTTGLAPQYRDCE--TYTQKLNGGVRQYRGLSFRVELCGAGPR 153 T L LA+ Y +AI G+ DC Y KLNGGV+Q G ++ V +CG+G R Sbjct: 87 TIVTLVFLALFYLIAI---RGITTDETDCRRFNYNDKLNGGVKQVDGATYVVNICGSGRR 143 Query: 154 ESDRL----DRVRLRIYDESGDLRAVRYFGVQWG-RDFPALLEYSRDHLSYFDAGDEEDF 208 + R ++V++ + D +G A R F V WG R +E L YFDA D D Sbjct: 144 GNGRFADQNEQVKITVSDANGSTLATRLFYVFWGGRPGYDPIEIRSGKLIYFDASDAYDS 203 Query: 209 ARVIAMPPTLADWVQTRIPL 228 R I++PPT DWV R+PL Sbjct: 204 TRSISLPPTTFDWVAARMPL 223 >gb|EGH12624.1| hypothetical protein PSYMP_21681 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 150 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%) Query: 99 LLYMLAMSYGLAIFVTTGLAPQYRDCETY--TQKLNGGVRQYRGLSFRVELCGAGPRES- 155 L++ MS L ++ C+ Y T+KLNGG + + +F + +CGAG S Sbjct: 16 FLFLFFMSISLVVYAALFSLLDNYSCQHYNHTEKLNGGSKSFNNKTFTIAICGAGVNNSL 75 Query: 156 ---DRLDRVRLRIYDESGDLRAVRYFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARV 211 D ++RVRL I+D+ G+L A RY+ V W G+ L+ S D + Y D D+E Sbjct: 76 FNGDGMERVRLTIFDDQGELLARRYYKVSWYGQPGHEPLKVSEDSIVYQD--DKEQMDHT 133 Query: 212 IAMPPTLADWVQTRIPL 228 I MPPT +W++ R+PL Sbjct: 134 IMMPPTRLEWIRARLPL 150 >ref|ZP_03588321.1| conserved hypothetical protein [Burkholderia multivorans CGD1] gb|EED97269.1| conserved hypothetical protein [Burkholderia multivorans CGD1] Length = 226 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 10/140 (7%) Query: 96 TATLLYMLAMSYGLAIFVTTGLAPQYRDCE--TYTQKLNGGVRQYRGLSFRVELCGAGPR 153 T L LA+ Y +AI G+ DC Y KLNGGV+Q G ++ V +CG+G R Sbjct: 87 TIVTLVFLALFYLIAI---RGITTDETDCRRFNYNDKLNGGVKQVDGATYVVNICGSGRR 143 Query: 154 ESDRL----DRVRLRIYDESGDLRAVRYFGVQWG-RDFPALLEYSRDHLSYFDAGDEEDF 208 + R ++V++ + D +G A R F V WG R +E L YFDA D D Sbjct: 144 GNGRFADQNEQVKITVSDANGSTLATRLFYVFWGGRPGYDPIEIYSGKLIYFDASDAYDS 203 Query: 209 ARVIAMPPTLADWVQTRIPL 228 R I++PPT DW+ R+PL Sbjct: 204 TRSISLPPTTFDWIAARMPL 223 >ref|YP_003750648.1| hypothetical protein RPSI07_mp1733 [Ralstonia solanacearum PSI07] emb|CBJ36052.1| membrane protein of unknown function [Ralstonia solanacearum PSI07] Length = 225 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 9/115 (7%) Query: 123 DCE--TYTQKLNGGVRQYRGLSFRVELCGAGPRES----DRLDRVRLRIYDESGDLRAVR 176 DC+ YT++LNGGV+++ G + + +CG+G S D +D V L I +E GDL A R Sbjct: 113 DCQKYNYTKQLNGGVKEFYGKKYTIGICGSGINNSHFFGDSMDAVELTITNEQGDLLAKR 172 Query: 177 YFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADWVQTRIPLLD 230 ++ V W G+ L +D ++Y D D++ IAMPPT DW++ ++PL + Sbjct: 173 HYKVFWDGQPGHEPLTIGKDRITYQD--DDKQADHTIAMPPTTIDWIRAKVPLFN 225 >gb|EGH82900.1| hypothetical protein PLA107_07211 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 146 Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 9/127 (7%) Query: 109 LAIFVTTGLAPQYRDCETY--TQKLNGGVRQYRGLSFRVELCGAGPRES----DRLDRVR 162 L I+ T DC++Y T++LNGG + + F + +CGAG S D ++RVR Sbjct: 22 LVIYSTAFNVLDNTDCQSYNHTKELNGGTKNFDNEKFIINICGAGLNNSLFNGDGMERVR 81 Query: 163 LRIYDESGDLRAVRYFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADW 221 L I+D+ G+L A RY+ + W G+ L++S ++Y D +++D A I MPPT +W Sbjct: 82 LTIFDDQGELLARRYYSIFWDGQPGHEPLKFSESSITYQDDKEQKDHA--ITMPPTRLEW 139 Query: 222 VQTRIPL 228 ++ R+PL Sbjct: 140 IRARLPL 146 >gb|EFW82597.1| hypothetical protein PsgB076_01179 [Pseudomonas syringae pv. glycinea str. B076] gb|EFW87329.1| hypothetical protein PsgRace4_03579 [Pseudomonas syringae pv. glycinea str. race 4] gb|EGH15449.1| hypothetical protein Pgy4_20631 [Pseudomonas syringae pv. glycinea str. race 4] Length = 140 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 9/127 (7%) Query: 109 LAIFVTTGLAPQYRDCETY--TQKLNGGVRQYRGLSFRVELCGAGPRES----DRLDRVR 162 L I+ T DC++Y T++LNGG + + F + +CGAG S D ++RVR Sbjct: 16 LVIYSTAFNVLDNTDCQSYNHTKELNGGTKNFDNEKFIINICGAGLNNSLFNGDGMERVR 75 Query: 163 LRIYDESGDLRAVRYFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADW 221 L I+D+ G+L A RY+ + W G+ L++S ++Y D D+E I MPPT +W Sbjct: 76 LTIFDDQGELLARRYYRIFWDGQPGHEPLKFSESSITYQD--DKEQKGHAITMPPTRLEW 133 Query: 222 VQTRIPL 228 ++ R+PL Sbjct: 134 IRARLPL 140 >ref|ZP_05636633.1| hypothetical protein PsyrptA_04950 [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH24656.1| hypothetical protein PSYMO_25679 [Pseudomonas syringae pv. mori str. 301020] gb|EGH92823.1| hypothetical protein PSYTB_24522 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 140 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 9/127 (7%) Query: 109 LAIFVTTGLAPQYRDCETY--TQKLNGGVRQYRGLSFRVELCGAGPRES----DRLDRVR 162 L ++ T DC++Y T++LNGG + + F + +CGAG S D ++RVR Sbjct: 16 LVVYSTAFNVLDNTDCQSYNHTKELNGGTKNFDNEKFIINICGAGLNNSLFNGDGMERVR 75 Query: 163 LRIYDESGDLRAVRYFGVQW-GRDFPALLEYSRDHLSYFDAGDEEDFARVIAMPPTLADW 221 L I+D+ G+L A RY+ + W G+ L++S ++Y D +++D A I MPPT +W Sbjct: 76 LTIFDDQGELLARRYYRIFWDGQPGHEPLKFSESSITYQDDKEQKDHA--ITMPPTRLEW 133 Query: 222 VQTRIPL 228 ++ R+PL Sbjct: 134 IRARLPL 140