BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0018.p (339 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773890.1| flavodoxin reductases (ferredoxin-NADPH redu... 378 e-103 ref|XP_002538271.1| Vanillate O-demethylase oxidoreductase, puta... 234 2e-59 ref|YP_001859406.1| ferredoxin [Burkholderia phymatum STM815] >g... 150 3e-34 ref|YP_001353363.1| vanB family oxidoreductase/oxygenase [Janthi... 147 2e-33 ref|ZP_03570339.1| 2Fe-2S iron-sulfur cluster binding domain pro... 144 2e-32 ref|YP_002233274.1| putative oxidoreductase [Burkholderia cenoce... 141 1e-31 ref|YP_004677222.1| Vanillate O-demethylase oxidoreductase [Hyph... 141 2e-31 ref|YP_003910223.1| ferredoxin [Burkholderia sp. CCGE1003] >gi|3... 141 2e-31 ref|YP_004682307.1| nicotinate-nucleotide pyrophosphorylase [Cup... 140 3e-31 ref|YP_003547113.1| vanillate monooxygenase oxidoreductase subun... 140 3e-31 >ref|YP_003773890.1| flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein [Herbaspirillum seropedicae SmR1] gb|ADJ61982.1| flavodoxin reductases (ferredoxin-NADPH reductases) family 1 protein [Herbaspirillum seropedicae SmR1] Length = 339 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 189/190 (99%), Positives = 189/190 (99%) Query: 1 MNAVADRFNGSAATTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGL 60 MNAVADRFNGSAATTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGL Sbjct: 1 MNAVADRFNGSAATTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGL 60 Query: 61 VRAYSLCNTPQQRDCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRA 120 VRAYSLCNTPQQRDCYLIAVKREPDSRGGSAFLH QVQEGTTISASPPVNAFPLIADVRA Sbjct: 61 VRAYSLCNTPQQRDCYLIAVKREPDSRGGSAFLHEQVQEGTTISASPPVNAFPLIADVRA 120 Query: 121 PLLLAAGIGITPLHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDG 180 PLLLAAGIGITPLHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDG Sbjct: 121 PLLLAAGIGITPLHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDG 180 Query: 181 AETEHAIAAA 190 AETEHAIAAA Sbjct: 181 AETEHAIAAA 190 >ref|XP_002538271.1| Vanillate O-demethylase oxidoreductase, putative [Ricinus communis] gb|EEF24113.1| Vanillate O-demethylase oxidoreductase, putative [Ricinus communis] Length = 267 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 117/119 (98%), Positives = 117/119 (98%) Query: 73 RDCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITP 132 RDCYLIAVKREPDSRGGSAFLH QVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITP Sbjct: 1 RDCYLIAVKREPDSRGGSAFLHEQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITP 60 Query: 133 LHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDGAETEHAIAAAW 191 LHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDGAETEHAIAAA Sbjct: 61 LHAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDGAETEHAIAAAL 119 >ref|YP_001859406.1| ferredoxin [Burkholderia phymatum STM815] gb|ACC72360.1| ferredoxin [Burkholderia phymatum STM815] Length = 320 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/183 (44%), Positives = 108/183 (59%), Gaps = 2/183 (1%) Query: 14 TTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQR 73 T+ +RV AQDIRLL+L + DG++LP W PG+H+ L L G+ R YSLC Sbjct: 2 NTIPVRVAVADTIAQDIRLLKLEANDGSSLPGWKPGSHIDLHLGQGITRQYSLCGPQGDT 61 Query: 74 DCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPL 133 Y +AVK EP SRGGS ++H ++ G+ + SPP N F + AD LL+A GIGITP+ Sbjct: 62 SAYQVAVKLEPQSRGGSKYVHESLKVGSELLISPPRNHFEMKADAGHTLLVAGGIGITPI 121 Query: 134 HAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHL--GLDGAETEHAIAAAW 191 +MA ELA + ++ L YF RS HAAF EL G G S L GL+ + E A+ A Sbjct: 122 ISMARELAEKRQQFELLYFTRSEHHAAFREELEGGPLGESCKLLCGLERDDVEEALEGAL 181 Query: 192 RRR 194 R Sbjct: 182 DDR 184 >ref|YP_001353363.1| vanB family oxidoreductase/oxygenase [Janthinobacterium sp. Marseille] gb|ABR89931.1| oxidoreductase/oxygenase, vanB family [Janthinobacterium sp. Marseille] Length = 319 Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 75/148 (50%), Positives = 94/148 (63%) Query: 14 TTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQR 73 TTL +RV + Q A DI+ EL S G ALP +TPG+H+ + + +GL+R YSLCN P + Sbjct: 2 TTLTVRVHKITQEACDIKSFELRSVSGEALPAFTPGSHIDVHIGEGLIRQYSLCNGPDEP 61 Query: 74 DCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPL 133 D YLIAVK+E SRGGS +H ++EG I S P N FPL LLLA GIG+TP+ Sbjct: 62 DRYLIAVKKEVTSRGGSQAMHESIREGDQIKISAPRNNFPLEQSQGPYLLLAGGIGVTPV 121 Query: 134 HAMAAELATQGRRHRLHYFARSLAHAAF 161 +MA L QG L YF RS+AH AF Sbjct: 122 LSMARHLLAQGVEFELQYFTRSIAHTAF 149 >ref|ZP_03570339.1| 2Fe-2S iron-sulfur cluster binding domain protein [Burkholderia multivorans CGD2M] ref|ZP_03576983.1| 2Fe-2S iron-sulfur cluster binding domain protein [Burkholderia multivorans CGD2] gb|EEE08560.1| 2Fe-2S iron-sulfur cluster binding domain protein [Burkholderia multivorans CGD2] gb|EEE16246.1| 2Fe-2S iron-sulfur cluster binding domain protein [Burkholderia multivorans CGD2M] Length = 326 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 2/164 (1%) Query: 18 LRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQRDCYL 77 +R+ A+ AAQDIR + DG L + PGAH+ + G+ R YSLC P +R YL Sbjct: 8 VRIDALIDAAQDIRCFRVSRVDGQPLDAYEPGAHIDVTAPSGVTRQYSLCGRPDERGSYL 67 Query: 78 IAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPLHAMA 137 AVK+E SRGGS LH V+ GT +S P N F L D +L+AAGIGITPL +MA Sbjct: 68 FAVKKETQSRGGSRSLHDDVRVGTELSIGTPRNLFRLADDASEHVLIAAGIGITPLLSMA 127 Query: 138 AELATQGRRHRLHYFARSLAHAAFFHELAAG--SQGMSLHLGLD 179 LA +G R+RLHYFARS HAAF EL+A + ++ H G++ Sbjct: 128 YALAQRGARYRLHYFARSRDHAAFVDELSAEPFASHVTFHYGVE 171 >ref|YP_002233274.1| putative oxidoreductase [Burkholderia cenocepacia J2315] emb|CAR54509.1| putative oxidoreductase [Burkholderia cenocepacia J2315] Length = 329 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/164 (46%), Positives = 98/164 (59%), Gaps = 2/164 (1%) Query: 18 LRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQRDCYL 77 +R+ A+ AAQDIR + DG + PGAH+ + G+ R YSLC P +R YL Sbjct: 8 VRIDALIDAAQDIRCFRVSRVDGQPFDAYEPGAHIDVTAPSGITRQYSLCGNPDERGSYL 67 Query: 78 IAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPLHAMA 137 AVK+E SRGGS LH V G +S P N F L D +L+AAGIGITPL +MA Sbjct: 68 FAVKKEARSRGGSRSLHDDVSVGAELSIGTPRNLFRLTDDASEHVLVAAGIGITPLLSMA 127 Query: 138 AELATQGRRHRLHYFARSLAHAAFFHELAAG--SQGMSLHLGLD 179 L +G R+RLHYFARS HAAF EL+AG + ++ H G++ Sbjct: 128 YALHKRGARYRLHYFARSRDHAAFVDELSAGPFAAHVTFHYGVE 171 >ref|YP_004677222.1| Vanillate O-demethylase oxidoreductase [Hyphomicrobium sp. MC1] emb|CCB66656.1| Vanillate O-demethylase oxidoreductase [Hyphomicrobium sp. MC1] Length = 320 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/173 (42%), Positives = 101/173 (58%) Query: 15 TLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQRD 74 TL ++V++ + A +I EL S DG+ LPP+T GAH+ + L GLVR YSLCN+P +R Sbjct: 5 TLTVKVKSKKNEAMNIASFELTSLDGSDLPPFTAGAHIDVHLAPGLVRQYSLCNSPSERH 64 Query: 75 CYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPLH 134 Y+I V R P+SRGGS FLH ++ G+ +S S P N FPL + +L A GIGITP+ Sbjct: 65 RYVIGVLRAPNSRGGSEFLHDIIRNGSRLSISMPRNNFPLAPTAKGSILFAGGIGITPIL 124 Query: 135 AMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDGAETEHAI 187 MA L+ +G LHY AR+ AF ++ A D A E A+ Sbjct: 125 CMAEHLSNEGSPFELHYSARTPDRLAFSADILASPYADRTIFHFDDAAPEQAL 177 >ref|YP_003910223.1| ferredoxin [Burkholderia sp. CCGE1003] gb|ADN60932.1| ferredoxin [Burkholderia sp. CCGE1003] Length = 329 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/177 (47%), Positives = 103/177 (58%), Gaps = 2/177 (1%) Query: 19 RVRAVRQAAQDIRLLELVSQD-GAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQRDCYL 77 RV A + A D+ L L S + A LP + GAH+ L L+DGLVR YSLC+ P +R Y Sbjct: 18 RVIARERVACDVVSLRLASSEANAELPAFEAGAHIDLHLRDGLVRKYSLCSDPSERAFYE 77 Query: 78 IAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPLHAMA 137 IAVKREP SRGGS F+H +++ G +S P N FPL D +LLAAGIGITPL AMA Sbjct: 78 IAVKREPASRGGSVFVHDEIRVGDILSIGKPENYFPLAPDGSGAVLLAAGIGITPLLAMA 137 Query: 138 AELATQGRRHRLHYFARSLAHAAFFHELAAG-SQGMSLHLGLDGAETEHAIAAAWRR 193 L G HYF RSL AA+ L +Q +LH+GL T +A RR Sbjct: 138 HTLKRAGPAFEFHYFVRSLDDAAYARTLQEQLAQVFTLHVGLTPELTRETLAELVRR 194 >ref|YP_004682307.1| nicotinate-nucleotide pyrophosphorylase [Cupriavidus necator N-1] gb|AEI81075.1| phthalate dioxygenase reductase OphA [Cupriavidus necator N-1] Length = 327 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/159 (45%), Positives = 99/159 (62%), Gaps = 5/159 (3%) Query: 12 AATTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQ 71 A T ++LR+ ++ AAQ IR E V DG LPP+TPG+H+++Q+ +G++R YSLCN P Sbjct: 12 ADTPMLLRIARIQDAAQGIRSFEFVQADGTELPPFTPGSHIKVQVPNGMLRKYSLCNDPA 71 Query: 72 QRDCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGIT 131 +R Y+I VKR+ +GGS L EG I P NAFPL+ D +A + +A GIGIT Sbjct: 72 ERHRYMITVKRDEQGQGGSKSLCDDASEGDLIPVGLPDNAFPLLEDAKAFVFIAGGIGIT 131 Query: 132 PLHAMA---AELATQGRRHRLHYFARSLAHAAFFHELAA 167 P+ +M EL+T + RL+YF RS AF EL A Sbjct: 132 PILSMIRSFGELSTA--KWRLYYFTRSPESTAFLDELQA 168 >ref|YP_003547113.1| vanillate monooxygenase oxidoreductase subunit [Sphingobium japonicum UT26S] dbj|BAI99090.1| vanillate monooxygenase oxidoreductase subunit [Sphingobium japonicum UT26S] Length = 321 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 100/172 (58%) Query: 14 TTLMLRVRAVRQAAQDIRLLELVSQDGAALPPWTPGAHLRLQLQDGLVRAYSLCNTPQQR 73 T L +RV A DI EL + DG++LP ++ G+H+ + + +GLVR YSLCN P + Sbjct: 4 TLLEVRVTKKTLEADDIASFELKNCDGSSLPHFSAGSHVDVNMANGLVRQYSLCNVPGET 63 Query: 74 DCYLIAVKREPDSRGGSAFLHGQVQEGTTISASPPVNAFPLIADVRAPLLLAAGIGITPL 133 D YLIAV R+P++RGGSAF+H +VQ+G T++ S P N F L D R +L A GIG+TP+ Sbjct: 64 DRYLIAVLRDPNTRGGSAFMHDRVQQGDTLTISQPRNLFALARDARRSILFAGGIGVTPI 123 Query: 134 HAMAAELATQGRRHRLHYFARSLAHAAFFHELAAGSQGMSLHLGLDGAETEH 185 AMA LA LHY RS + AF +++ H D E Sbjct: 124 LAMAERLAQIDAPFELHYCGRSRSRTAFLDRISSSHFSKQAHFHFDDGPEEQ 175