BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0076.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776673.1| Rossmann fold nucleotide-binding protein [He... 414 e-114 ref|YP_004752536.1| Lysine decarboxylase family [Collimonas fung... 295 2e-78 ref|YP_001353846.1| hypothetical protein mma_2156 [Janthinobacte... 286 1e-75 ref|YP_001099534.1| putative signal peptide [Herminiimonas arsen... 285 2e-75 ref|ZP_08273830.1| putative signal peptide containing protein [O... 245 3e-63 ref|YP_003907588.1| hypothetical protein BC1003_2344 [Burkholder... 243 9e-63 ref|YP_001858256.1| hypothetical protein Bphy_2031 [Burkholderia... 243 2e-62 ref|ZP_02378332.1| hypothetical protein BuboB_11440 [Burkholderi... 241 4e-62 ref|YP_557794.1| hypothetical protein Bxe_A3240 [Burkholderia xe... 241 4e-62 ref|ZP_06843420.1| conserved hypothetical protein [Burkholderia ... 241 4e-62 >ref|YP_003776673.1| Rossmann fold nucleotide-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ64765.1| Rossmann fold nucleotide-binding protein [Herbaspirillum seropedicae SmR1] Length = 198 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA Sbjct: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW Sbjct: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT Sbjct: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 Query: 181 PTYKTKWADREAVANLLP 198 PTYKTKWADREAVANLLP Sbjct: 181 PTYKTKWADREAVANLLP 198 >ref|YP_004752536.1| Lysine decarboxylase family [Collimonas fungivorans Ter331] gb|AEK61713.1| Lysine decarboxylase family [Collimonas fungivorans Ter331] Length = 196 Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 136/193 (70%), Positives = 162/193 (83%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 +KS+CVYCGSSPGA+P YAEAAR LA+ MV +IALVYGGGNVGLMGIIA EV++LGG A Sbjct: 4 IKSLCVYCGSSPGATPVYAEAARGLAQAMVEQDIALVYGGGNVGLMGIIADEVLRLGGRA 63 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 TGVIP+ALL KELGH GLT+LHIVKDMHERKAMMA+LSDGF+AMPGG+GTLEELFEV TW Sbjct: 64 TGVIPQALLQKELGHKGLTQLHIVKDMHERKAMMADLSDGFIAMPGGVGTLEELFEVFTW 123 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLGFH KPI L NV+GFYD L+ F+ H+VSQRF+ +Q+ +++ EA A L+QRF++F Sbjct: 124 AQLGFHQKPIGLLNVDGFYDGLLQFIQHMVSQRFLKGEQAEILIAEAHAAELLQRFKSFV 183 Query: 181 PTYKTKWADREAV 193 P KW DR + Sbjct: 184 PHLVPKWLDRNTI 196 >ref|YP_001353846.1| hypothetical protein mma_2156 [Janthinobacterium sp. Marseille] gb|ABR89353.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 198 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 135/198 (68%), Positives = 161/198 (81%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGSS G P YAEAAR LA+EMV++ I+LVYGGGNVGLMG+IA+E+++LGG+A Sbjct: 1 MKSLCVYCGSSYGVKPVYAEAARALAKEMVDHQISLVYGGGNVGLMGVIANEILRLGGQA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 TGVIP+AL+DKE+GH LT LH+VKDMHERKAMMAELSDGFVAMPGG+GTLEELFE+LTW Sbjct: 61 TGVIPQALMDKEVGHRELTHLHVVKDMHERKAMMAELSDGFVAMPGGIGTLEELFEILTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 +QLGFH KPI + NV+GFYD LIAF+ + V+Q FV +Q+ LMMHE L+ R QTF Sbjct: 121 SQLGFHQKPIGVLNVDGFYDGLIAFLQNQVAQGFVKDNQASLMMHEITARALLIRLQTFV 180 Query: 181 PTYKTKWADREAVANLLP 198 P TK D A LLP Sbjct: 181 PQPSTKVLDALAAKTLLP 198 >ref|YP_001099534.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL61407.1| putative lysine decarboxylase [Herminiimonas arsenicoxydans] Length = 198 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 136/197 (69%), Positives = 160/197 (81%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGSS GA P YA+AAR LA EMV +IALVYGGGNVGLMG+IA+EV++LGG A Sbjct: 1 MKSLCVYCGSSFGAKPVYADAARTLAGEMVRQDIALVYGGGNVGLMGVIANEVLRLGGTA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 TGVIP+ALLDKE+GH LT LH+VKDMHERKAMMAELSDGF+AMPGG+GTLEELFEVLTW Sbjct: 61 TGVIPQALLDKEVGHTQLTHLHVVKDMHERKAMMAELSDGFIAMPGGIGTLEELFEVLTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 +QLGFH KP+ + NV+GFYD LIAF+ + V+Q FV ++Q+ LMMHE + L+ R QTF Sbjct: 121 SQLGFHEKPVGVLNVDGFYDGLIAFLQNQVAQGFVKANQAALMMHEKSASELLHRLQTFI 180 Query: 181 PTYKTKWADREAVANLL 197 P TK D A LL Sbjct: 181 PQPSTKVLDALAAKTLL 197 >ref|ZP_08273830.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32694.1| putative signal peptide containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 202 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 114/197 (57%), Positives = 148/197 (75%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 + S+CVYCG+S G + Y +AAR + + +V ++IALVYGGG +GLMG IA EV++LGG A Sbjct: 5 INSLCVYCGASSGNAAPYVDAARMMGKALVEHDIALVYGGGQIGLMGAIADEVLRLGGTA 64 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 TGVIP ALL KE+GH GLT+LH+VKDMHERKAMMAELSDGF+AMPGGMGT+EELFE+LTW Sbjct: 65 TGVIPHALLGKEVGHPGLTKLHVVKDMHERKAMMAELSDGFIAMPGGMGTMEELFEMLTW 124 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 +QLGFH KPI L NV GFYD LI FVDH+V++ F+ L+M + A L+ + +++ Sbjct: 125 SQLGFHDKPIGLLNVLGFYDGLIGFVDHMVTEGFLRPHHRQLLMQDTAAASLVGQLRSYR 184 Query: 181 PTYKTKWADREAVANLL 197 P K + + L+ Sbjct: 185 PGQIAKLLNSATASTLV 201 >ref|YP_003907588.1| hypothetical protein BC1003_2344 [Burkholderia sp. CCGE1003] gb|ADN58297.1| Conserved hypothetical protein CHP00730 [Burkholderia sp. CCGE1003] Length = 194 Score = 243 bits (621), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 116/194 (59%), Positives = 140/194 (72%), Gaps = 1/194 (0%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGS+ GA P YAEAAR R +V ++ALVYGGG VGLMG+IA VM GG A Sbjct: 1 MKSVCVYCGSANGAKPLYAEAARAFGRALVEADLALVYGGGKVGLMGVIADTVMAEGGRA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 GVIP+ L++KE+GHDGLT LH+V DMH RK MMA+LSD FVAMPGG GTLEE FEV TW Sbjct: 61 IGVIPELLVNKEVGHDGLTELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEEFFEVYTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLG+H KP+ L N++GFYD LI + H V + F+ ++ +ADPA LI + Q + Sbjct: 121 AQLGYHQKPVALLNIDGFYDPLIKLLQHTVEEGFMRQTYLDILQMDADPAALIGKLQRYQ 180 Query: 181 PTYKTKWA-DREAV 193 P KWA REAV Sbjct: 181 PPAADKWAIKREAV 194 >ref|YP_001858256.1| hypothetical protein Bphy_2031 [Burkholderia phymatum STM815] gb|ACC71210.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 194 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 111/191 (58%), Positives = 141/191 (73%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGSS GA P Y EAA+ R +V N++LVYGGG VGLMG+IA EVM GG A Sbjct: 1 MKSVCVYCGSSDGAKPLYREAAKAFGRALVAANLSLVYGGGKVGLMGVIADEVMAAGGRA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 GVIP+ L++KE+GHDGL+ LH+V +MH RK MMA+LSD FVAMPGG GTLEELFEV TW Sbjct: 61 IGVIPELLVNKEVGHDGLSELHVVPNMHHRKKMMADLSDAFVAMPGGAGTLEELFEVFTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLG+H K + + N++GFYD LI+ ++H V + F+ ++ ++DPA LI R Q + Sbjct: 121 AQLGYHQKAVAVLNIDGFYDPLISMLEHTVQEGFMRQAYFDILQVDSDPAALIGRLQRYQ 180 Query: 181 PTYKTKWADRE 191 P + KWADR Sbjct: 181 PPLQDKWADRR 191 >ref|ZP_02378332.1| hypothetical protein BuboB_11440 [Burkholderia ubonensis Bu] Length = 195 Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 112/191 (58%), Positives = 137/191 (71%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MK++CVYCGSSPG P YAEAAR R +V+ + LVYGGG VGLMG IA EVM GG A Sbjct: 1 MKAVCVYCGSSPGVRPVYAEAARAFGRALVDAGLTLVYGGGRVGLMGTIADEVMAAGGRA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 GVIP+ L+DKE+GH GL+ LH+V DMH RK MMA+L+DGFVAMPGG GTLEE FEV TW Sbjct: 61 VGVIPELLVDKEVGHTGLSELHVVPDMHHRKKMMADLADGFVAMPGGAGTLEEFFEVYTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLG+H KP+ LYN++ FYD LIA + H V + F+ + +ADPA LI + + + Sbjct: 121 AQLGYHRKPVALYNIDAFYDPLIALLRHTVDEGFMRPAYFDTLCIDADPAALIGQLRGYQ 180 Query: 181 PTYKTKWADRE 191 P + KWA E Sbjct: 181 PPTRDKWAPDE 191 >ref|YP_557794.1| hypothetical protein Bxe_A3240 [Burkholderia xenovorans LB400] gb|ABE29742.1| Conserved hypothetical protein 730 [Burkholderia xenovorans LB400] Length = 194 Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 117/194 (60%), Positives = 138/194 (71%), Gaps = 1/194 (0%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGSS GA P YAEAAR R +V +ALVYGGG VGLMG+IA VM GG A Sbjct: 1 MKSVCVYCGSSNGAKPLYAEAARAFGRALVQAGLALVYGGGKVGLMGVIADTVMAEGGRA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 GVIP+ L++KE+GHDGLT LH+V DMH RK MMA+LSD FVAMPGG GTLEELFEV TW Sbjct: 61 IGVIPELLVNKEVGHDGLTELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLG+H K + L N++GFYD LI + H V + F+ ++ EADPA LI + Q + Sbjct: 121 AQLGYHQKAVALLNIDGFYDPLIKLLQHTVEEGFMRQTYFDILQIEADPAALIGKLQRYQ 180 Query: 181 PTYKTKWA-DREAV 193 P KWA R AV Sbjct: 181 PPASDKWAISRNAV 194 >ref|ZP_06843420.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] gb|EFG68934.1| conserved hypothetical protein [Burkholderia sp. Ch1-1] Length = 194 Score = 241 bits (615), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 115/194 (59%), Positives = 140/194 (72%), Gaps = 1/194 (0%) Query: 1 MKSICVYCGSSPGASPAYAEAARKLAREMVNNNIALVYGGGNVGLMGIIASEVMQLGGEA 60 MKS+CVYCGSS GA P YA+AAR R +V ++ALVYGGG VGLMG+IA VM GG A Sbjct: 1 MKSVCVYCGSSSGAKPLYAQAARAFGRALVQADLALVYGGGKVGLMGVIADTVMAEGGRA 60 Query: 61 TGVIPKALLDKELGHDGLTRLHIVKDMHERKAMMAELSDGFVAMPGGMGTLEELFEVLTW 120 GVIP+ L++KE+GHDGLT LH+V DMH RK MMA+LSD FVAMPGG GTLEELFEV TW Sbjct: 61 IGVIPELLVNKEVGHDGLTELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTW 120 Query: 121 AQLGFHYKPICLYNVNGFYDNLIAFVDHLVSQRFVSSDQSGLMMHEADPARLIQRFQTFT 180 AQLG+H K + L N++GFYD LI + H V + F+ ++ +ADPA LI + Q + Sbjct: 121 AQLGYHQKAVALLNIDGFYDPLIKLLQHTVEEGFMRQTYFDILQIDADPAALIGKLQRYQ 180 Query: 181 PTYKTKWA-DREAV 193 P KWA R+AV Sbjct: 181 PPASDKWAISRDAV 194