BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0066.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776683.1| tRNA pseudouridine synthase [Herbaspirillum ... 614 e-174 ref|YP_004752526.1| tRNA pseudouridine synthase A [Collimonas fu... 377 e-102 ref|YP_001353856.1| tRNA pseudouridine synthase A [Janthinobacte... 360 2e-97 ref|YP_001099524.1| tRNA pseudouridine synthase A [Herminiimonas... 352 5e-95 ref|ZP_04577210.1| tRNA pseudouridine synthase A [Oxalobacter fo... 338 8e-91 ref|ZP_04579346.1| tRNA pseudouridine synthase A [Oxalobacter fo... 326 3e-87 ref|NP_520106.1| tRNA pseudouridine synthase A [Ralstonia solana... 311 8e-83 ref|YP_003752097.1| tRNA pseudouridylate synthase I [Ralstonia s... 308 8e-82 emb|CBJ37593.1| tRNA pseudouridylate synthase I [Ralstonia solan... 308 9e-82 ref|ZP_06687064.1| tRNA pseudouridine synthase A [Achromobacter ... 307 2e-81 >ref|YP_003776683.1| tRNA pseudouridine synthase [Herbaspirillum seropedicae SmR1] gb|ADJ64775.1| tRNA pseudouridine synthase protein [Herbaspirillum seropedicae SmR1] Length = 300 Score = 614 bits (1583), Expect = e-174, Method: Compositional matrix adjust. Identities = 298/300 (99%), Positives = 299/300 (99%) Query: 10 MTELDPQAEGLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGR 69 MTELDPQAEGLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGR Sbjct: 1 MTELDPQAEGLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGR 60 Query: 70 TDSGVHALEQIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQA 129 TDSGVHALEQIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIA AA+QA Sbjct: 61 TDSGVHALEQIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIASAASQA 120 Query: 130 AELHGADRAGADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRM 189 AELHGADRAGADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRM Sbjct: 121 AELHGADRAGADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRM 180 Query: 190 HRAAQHLIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIV 249 HRAAQHLIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIV Sbjct: 181 HRAAQHLIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIV 240 Query: 250 GSLVVVGSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWPWL 309 GSLVVVGSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWPWL Sbjct: 241 GSLVVVGSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWPWL 300 >ref|YP_004752526.1| tRNA pseudouridine synthase A [Collimonas fungivorans Ter331] gb|AEK61703.1| tRNA pseudouridine synthase A [Collimonas fungivorans Ter331] Length = 280 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 183/292 (62%), Positives = 221/292 (75%), Gaps = 25/292 (8%) Query: 19 GLRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALE 78 L R+VLGVQYDG WQGWQTQP +TVQD+LEAALQ+F+ I TTCAGRTDSGVHALE Sbjct: 13 NLNRIVLGVQYDGTPWQGWQTQPSGKTVQDRLEAALQKFAQGAIDTTCAGRTDSGVHALE 72 Query: 79 QIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRA 138 Q+VHFDT ++R++FSWVRG NAFLPP+IAVRWA +LP + + G D+ Sbjct: 73 QVVHFDTALSRETFSWVRGLNAFLPPSIAVRWAHQLPLLAE--------------GEDQ- 117 Query: 139 GADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLIG 198 FHARFSA ARTYHY+LYN+ VR+PLL GKAGW FRPL+ + M +AA HL+G Sbjct: 118 ---------FHARFSATARTYHYLLYNNPVRSPLLEGKAGWVFRPLELELMRQAAAHLVG 168 Query: 199 EHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGSG 258 HDF++FRAVECQAKSPVR ME I + R GD+IVF+L+ANAFLHHMVRNIVGSL+ G+ Sbjct: 169 THDFSAFRAVECQAKSPVRTMEEIRIERRGDLIVFSLRANAFLHHMVRNIVGSLIYAGNA 228 Query: 259 KQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQE-SRAWPWL 309 + P+W+ ++LA RDR RAAPTFMPDGLYLA+V Y W LPQ+ + PWL Sbjct: 229 SKPPEWLAELLAQRDRGRAAPTFMPDGLYLAQVAYDPKWRLPQQPAGVLPWL 280 >ref|YP_001353856.1| tRNA pseudouridine synthase A [Janthinobacterium sp. Marseille] sp|A6T009.1|TRUA_JANMA RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I gb|ABR89348.1| tRNA pseudouridine synthase A [Janthinobacterium sp. Marseille] Length = 271 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 170/281 (60%), Positives = 206/281 (73%), Gaps = 24/281 (8%) Query: 21 RRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQI 80 +R+VLGVQYDG WQGWQTQ + TVQD+LE AL +F+ Q ++T CAGRTD+GVH LEQ+ Sbjct: 6 KRIVLGVQYDGTPWQGWQTQLNGLTVQDRLEFALSKFTLQTVSTVCAGRTDAGVHGLEQV 65 Query: 81 VHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAGA 140 VHFDT + RD SWVRG N FLPP+IAVRWA E+ + D Sbjct: 66 VHFDTTLERDMSSWVRGVNTFLPPSIAVRWATEVAHNPD--------------------- 104 Query: 141 DSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLIGEH 200 Q FHARFSA +R Y YVLYN+ VR+PLL GKAGW FR LD +RM AAQHL+GEH Sbjct: 105 ---EQDNFHARFSARSRMYQYVLYNNPVRSPLLEGKAGWVFRKLDVERMRTAAQHLLGEH 161 Query: 201 DFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGSGKQ 260 DF++FR+V+CQAKSPV+ M SI + + GD+I+FTL ANAFLHHMVRNIVGSL+ VG+G Q Sbjct: 162 DFSTFRSVQCQAKSPVKSMYSIKIEQRGDLIMFTLHANAFLHHMVRNIVGSLIYVGNGAQ 221 Query: 261 EPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQ 301 +PDW+ ++L RDR AAPTFMPDGLYLA++DY W LPQ Sbjct: 222 QPDWLKELLDGRDRKFAAPTFMPDGLYLAKIDYDPKWQLPQ 262 >ref|YP_001099524.1| tRNA pseudouridine synthase A [Herminiimonas arsenicoxydans] sp|A4G4G0.1|TRUA_HERAR RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I emb|CAL61397.1| tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I) [Herminiimonas arsenicoxydans] Length = 275 Score = 352 bits (903), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 170/281 (60%), Positives = 206/281 (73%), Gaps = 26/281 (9%) Query: 21 RRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQI 80 RR+VLGVQYDGA WQGWQTQ + TVQD+LE AL +F+ Q I T CAGRTD+GVHALEQ+ Sbjct: 12 RRIVLGVQYDGAPWQGWQTQLNGLTVQDKLEFALYKFTQQTITTACAGRTDAGVHALEQV 71 Query: 81 VHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAGA 140 VHFDT + RD SWVRG N FLP +IAVRWA E+ A+ AE Sbjct: 72 VHFDTTLERDMQSWVRGVNTFLPSSIAVRWASEV-----------AHDPAE--------- 111 Query: 141 DSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLIGEH 200 FHARFSA +RTYHY+LYN+ VR+PLL GKAGW FR LD +M AA HL+G+H Sbjct: 112 ------NFHARFSARSRTYHYMLYNNPVRSPLLEGKAGWVFRALDIAKMQEAAAHLLGQH 165 Query: 201 DFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGSGKQ 260 DF++FR+V+CQAKSPV+ M +I + R GD+I+FT+ ANAFLHHMVRNIVGSL+ VG+G Q Sbjct: 166 DFSAFRSVQCQAKSPVKTMHAIKIERRGDLIMFTVHANAFLHHMVRNIVGSLIYVGNGTQ 225 Query: 261 EPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQ 301 P W+ +VLA ++R AAPTFMPDGLYLA++DY W LPQ Sbjct: 226 APSWLKEVLAGQERKFAAPTFMPDGLYLAKIDYDPKWQLPQ 266 >ref|ZP_04577210.1| tRNA pseudouridine synthase A [Oxalobacter formigenes HOxBLS] gb|EEO28172.1| tRNA pseudouridine synthase A [Oxalobacter formigenes HOxBLS] Length = 264 Score = 338 bits (866), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 158/288 (54%), Positives = 201/288 (69%), Gaps = 27/288 (9%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQ 79 ++R+ LG++YDG W+GWQTQP TVQDQLEAA+++F+ +ATTCAGRTD+GVHA EQ Sbjct: 4 MKRIALGIEYDGTGWRGWQTQPDGMTVQDQLEAAIRQFTRMDMATTCAGRTDAGVHATEQ 63 Query: 80 IVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAG 139 +VH DT + R SWVRG N++LP +IAVRWACE+P G Sbjct: 64 VVHLDTGLERLPVSWVRGINSYLPSSIAVRWACEVP----------------------GG 101 Query: 140 ADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLIGE 199 D GFHAR SAIAR Y Y++YN VR+PL +AGW FRPLD + M A L+GE Sbjct: 102 KD-----GFHARSSAIARRYRYLVYNSPVRSPLWKNRAGWVFRPLDLEWMREGAGFLLGE 156 Query: 200 HDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGSGK 259 HDF++FRA ECQ+ +PV+ M I + + G++IVFT +ANAFLHHM+RNIVGSL+VVG G Sbjct: 157 HDFSAFRAAECQSITPVKTMNGIGIEKQGNLIVFTFEANAFLHHMIRNIVGSLIVVGKGN 216 Query: 260 QEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWP 307 + P WM ++L RDRS+AAPTFMPDGLYL+RV Y + W LPQ +P Sbjct: 217 RPPKWMKELLESRDRSQAAPTFMPDGLYLSRVFYEEKWGLPQREDVFP 264 >ref|ZP_04579346.1| tRNA pseudouridine synthase A [Oxalobacter formigenes OXCC13] gb|EEO30319.1| tRNA pseudouridine synthase A [Oxalobacter formigenes OXCC13] Length = 261 Score = 326 bits (835), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 154/288 (53%), Positives = 197/288 (68%), Gaps = 27/288 (9%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQ 79 ++R+ LG++YDG +W+GWQTQP TVQDQL+ A+ RF+ I+T CAGRTD+GVHA EQ Sbjct: 1 MKRIALGIEYDGTNWRGWQTQPDGMTVQDQLQEAIFRFTRTRISTMCAGRTDAGVHASEQ 60 Query: 80 IVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAG 139 +VH DT + R SWVRG NA+LP +IAVRWACE+P G Sbjct: 61 VVHLDTELDRLPVSWVRGVNAYLPSSIAVRWACEVP----------------------GG 98 Query: 140 ADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLIGE 199 D GFHAR SA+AR Y Y++YN VR+PL +AGW F+PLD M + A L+GE Sbjct: 99 KD-----GFHARSSAMARRYRYLIYNSPVRSPLWKNRAGWVFKPLDIGLMQKGAGLLLGE 153 Query: 200 HDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGSGK 259 HDF++FRA ECQ+ +PV+ ++ I + + G++IVFT +ANAFLHHMVRNIVGSLV +G G Sbjct: 154 HDFSAFRAAECQSITPVKTVKRIDIEKQGNLIVFTFEANAFLHHMVRNIVGSLVYIGKGN 213 Query: 260 QEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQESRAWP 307 P+WM Q+L +DRS AAPTFMPDGLYL+RV Y W LPQ +P Sbjct: 214 HPPEWMKQLLDAKDRSLAAPTFMPDGLYLSRVHYEAKWGLPQREDVFP 261 >ref|NP_520106.1| tRNA pseudouridine synthase A [Ralstonia solanacearum GMI1000] sp|Q8XXX8.1|TRUA_RALSO RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I emb|CAD15687.1| probable trna pseudouridine synthase a (trna-uridine isomerasei) (trna pseudouridylate synthaseI protein [Ralstonia solanacearum GMI1000] Length = 274 Score = 311 bits (797), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 160/285 (56%), Positives = 190/285 (66%), Gaps = 34/285 (11%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQ 79 + R+ LG+QYDGA++ GWQ+QPH TVQD LEAAL+ F+ + TT AGRTD+GVHAL Q Sbjct: 1 MTRIALGIQYDGAAFSGWQSQPHGNTVQDVLEAALREFAGVALPTTVAGRTDAGVHALGQ 60 Query: 80 IVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAG 139 +VH DT + RD FSWVRGTNAFLPPT+AVRWA +P +D Sbjct: 61 VVHLDTELVRDPFSWVRGTNAFLPPTVAVRWAQAMP--ED-------------------- 98 Query: 140 ADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRP----LDADRMHRAAQH 195 FHARFSA RTY+Y L R PLL GKAG+ P LD MH AAQ Sbjct: 99 --------FHARFSAHRRTYYYALTYGPTRAPLLEGKAGYVTLPPGQSLDVTAMHEAAQV 150 Query: 196 LIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVV 255 L+GEHDF+SFRA ECQAKSPV+ M S VR G+ + ++ +AFLHHMVRNI+G LV + Sbjct: 151 LVGEHDFSSFRAAECQAKSPVKTMYSTEVRGQGEWVFVRIRGSAFLHHMVRNIMGCLVAI 210 Query: 256 GSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALP 300 G GK+ WMG+VLA RDR AAPTFMPDGLYLA V YPDA+ LP Sbjct: 211 GRGKRPAAWMGEVLAARDRKAAAPTFMPDGLYLAEVGYPDAFRLP 255 >ref|YP_003752097.1| tRNA pseudouridylate synthase I [Ralstonia solanacearum PSI07] emb|CBJ50805.1| tRNA pseudouridylate synthase I [Ralstonia solanacearum PSI07] emb|CCA83373.1| tRNA pseudouridylate synthase I [blood disease bacterium R229] Length = 274 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 158/285 (55%), Positives = 190/285 (66%), Gaps = 34/285 (11%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQ 79 + R+ LG+QYDGA++ GWQ+QPH TVQD LEAAL++F+ + T AGRTD+GVHAL Q Sbjct: 1 MTRIALGIQYDGAAFSGWQSQPHGNTVQDVLEAALRQFAGVELPTIVAGRTDAGVHALGQ 60 Query: 80 IVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAG 139 +VH DT + RD FSWVRGTNAFLPPT+AVRWA E+P +D Sbjct: 61 VVHLDTDLVRDPFSWVRGTNAFLPPTVAVRWAQEVP--ED-------------------- 98 Query: 140 ADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRP----LDADRMHRAAQH 195 FHARFSA RTY+Y L + R PLL GKAG+ P LD M AAQ Sbjct: 99 --------FHARFSAHRRTYYYALVSGPTRAPLLGGKAGYVMLPPGESLDVAAMQEAAQV 150 Query: 196 LIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVV 255 L+GEHDF+SFRA ECQAKSPV+ M S R G+ + ++ +AFLHHMVRNI+G LV + Sbjct: 151 LVGEHDFSSFRAAECQAKSPVKTMYSAEARGQGEWVFVRIRGSAFLHHMVRNIMGCLVAI 210 Query: 256 GSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALP 300 G GK+ WMG+VLA RDR AAPTFMPDGLYLA V YPDA+ LP Sbjct: 211 GRGKRPVAWMGEVLAARDRKVAAPTFMPDGLYLAEVGYPDAFRLP 255 >emb|CBJ37593.1| tRNA pseudouridylate synthase I [Ralstonia solanacearum CMR15] Length = 274 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 158/285 (55%), Positives = 190/285 (66%), Gaps = 34/285 (11%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFSTQPIATTCAGRTDSGVHALEQ 79 + R+ LG+QYDGA++ GWQ+QPH TVQD LEAAL+ F+ + TT AGRTD+GVHAL Q Sbjct: 1 MTRIALGIQYDGAAFSGWQSQPHGNTVQDVLEAALREFAGVVLPTTVAGRTDAGVHALGQ 60 Query: 80 IVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADRAG 139 ++H DT + RD FSWVRGTNAFLPPT+AVRWA +P +D Sbjct: 61 VIHLDTDLVRDPFSWVRGTNAFLPPTVAVRWAQAMP--ED-------------------- 98 Query: 140 ADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRP----LDADRMHRAAQH 195 FHARFSA RTY+Y L R PLL GKAG+ P LD MH AAQ Sbjct: 99 --------FHARFSAHRRTYYYALTYGPTRAPLLEGKAGYVTLPPGQSLDVAAMHEAAQV 150 Query: 196 LIGEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVV 255 L+GEHDF+SFRA ECQAKSPV+ M S VR G+ + ++ +AFLHHMVRNI+G LV + Sbjct: 151 LVGEHDFSSFRAAECQAKSPVKTMYSAEVRGQGEWVFVRIRGSAFLHHMVRNIMGCLVAI 210 Query: 256 GSGKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALP 300 G GK+ WMG+VLA R+R AAPTFMPDGLYLA V YPDA+ LP Sbjct: 211 GRGKRPAAWMGEVLAARERKAAAPTFMPDGLYLAEVGYPDAFRLP 255 >ref|ZP_06687064.1| tRNA pseudouridine synthase A [Achromobacter piechaudii ATCC 43553] gb|EFF75914.1| tRNA pseudouridine synthase A [Achromobacter piechaudii ATCC 43553] Length = 270 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 155/284 (54%), Positives = 191/284 (67%), Gaps = 32/284 (11%) Query: 20 LRRVVLGVQYDGASWQGWQTQPHRQTVQDQLEAALQRFS--TQPIATTCAGRTDSGVHAL 77 + RV LG+ YDG++WQGWQTQPHRQTVQD LE+AL RF P+ T CAGRTD+GVH Sbjct: 2 MSRVALGLAYDGSAWQGWQTQPHRQTVQDTLESALARFCGVQDPVPTICAGRTDTGVHGA 61 Query: 78 EQIVHFDTPIARDSFSWVRGTNAFLPPTIAVRWACELPYVDDAAIAGAANQAAELHGADR 137 Q+VH DT + R SWVRG NAFLPP+++V+WA E V D Sbjct: 62 MQVVHLDTSLDRRMESWVRGVNAFLPPSVSVQWAQE---VSDE----------------- 101 Query: 138 AGADSLSQFGFHARFSAIARTYHYVLYNHAVRTPLLAGKAGWTFRPLDADRMHRAAQHLI 197 FHARFSA ARTY Y+L+ VR L AG+AGW F+ LD D M AAQ L+ Sbjct: 102 ----------FHARFSARARTYVYLLWRGRVRPALWAGRAGWCFQTLDVDAMRAAAQALV 151 Query: 198 GEHDFTSFRAVECQAKSPVRKMESIAVRRHGDMIVFTLKANAFLHHMVRNIVGSLVVVGS 257 GEHDF+SFR+ +CQAK PVR M + + G +VFTLKANAFLHHMVRNI+G+L+ VG Sbjct: 152 GEHDFSSFRSSQCQAKHPVRHMHRLDIAERGPFLVFTLKANAFLHHMVRNIMGALLQVGQ 211 Query: 258 GKQEPDWMGQVLALRDRSRAAPTFMPDGLYLARVDYPDAWALPQ 301 G++ DWM Q+L+LRDR+R APTF PDGLYL+ +DYP + L + Sbjct: 212 GRESVDWMAQLLSLRDRTRGAPTFAPDGLYLSSIDYPAEFGLQE 255