BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0044.p (547 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776701.1| Fe3+ ABC transporter permease [Herbaspirillu... 1055 0.0 ref|YP_004620536.1| Fe3+ ABC transporter permease with duplicate... 479 e-133 ref|YP_981089.1| binding-protein-dependent transport systems inn... 476 e-132 ref|YP_987753.1| binding-protein-dependent transport systems inn... 466 e-129 ref|YP_004389733.1| ABC transporter integral membrane subunit [A... 466 e-129 ref|YP_004128224.1| binding-protein-dependent transport systems ... 466 e-129 ref|YP_002554322.1| binding-protein-dependent transport systems ... 466 e-129 ref|ZP_08403349.1| binding-protein-dependent transport systems i... 465 e-128 ref|ZP_08871105.1| binding-protein-dependent transport systems i... 463 e-128 ref|YP_004233356.1| binding-protein-dependent transport systems ... 463 e-128 >ref|YP_003776701.1| Fe3+ ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64793.1| ABC-type Fe3+ transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 547 Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 547/547 (100%), Positives = 547/547 (100%) Query: 1 MHFIGLLAVLIALPILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVV 60 MHFIGLLAVLIALPILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVV Sbjct: 1 MHFIGLLAVLIALPILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVV 60 Query: 61 VVGGATAVTVSLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPG 120 VVGGATAVTVSLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPG Sbjct: 61 VVGGATAVTVSLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPG 120 Query: 121 FRMEVRGLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPL 180 FRMEVRGLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPL Sbjct: 121 FRMEVRGLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPL 180 Query: 181 ARPALAAGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVT 240 ARPALAAGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVT Sbjct: 181 ARPALAAGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVT 240 Query: 241 VLLWLERREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAI 300 VLLWLERREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAI Sbjct: 241 VLLWLERREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAI 300 Query: 301 LLRLWWSEAGQGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAA 360 LLRLWWSEAGQGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAA Sbjct: 301 LLRLWWSEAGQGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAA 360 Query: 361 LLRLTARLAGMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFT 420 LLRLTARLAGMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFT Sbjct: 361 LLRLTARLAGMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFT 420 Query: 421 AVAVQSVESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKEL 480 AVAVQSVESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKEL Sbjct: 421 AVAVQSVESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKEL 480 Query: 481 PATLLLRPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRALDGKRSQPL 540 PATLLLRPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRALDGKRSQPL Sbjct: 481 PATLLLRPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRALDGKRSQPL 540 Query: 541 QNAAPPA 547 QNAAPPA Sbjct: 541 QNAAPPA 547 >ref|YP_004620536.1| Fe3+ ABC transporter permease with duplicated domains [Ramlibacter tataouinensis TTB310] gb|AEG94517.1| candidate ABC type Fe3+ transport system, permease component with duplicated domains [Ramlibacter tataouinensis TTB310] Length = 549 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 308/523 (58%), Positives = 375/523 (71%), Gaps = 14/523 (2%) Query: 14 PILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLF 73 P+ G+L AW D LR+ A TVLP Y TS L L V GV +VG TA V+LF Sbjct: 33 PVAGVLAAWLQWDGPSASILREMAATVLPDYAVTSLVLCLAVAAGVALVGMGTAAAVTLF 92 Query: 74 EFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLP 129 +F GRR F WALLLP+AMPAYV AYAYTDFLQ++G +QS LR F G EVR +P Sbjct: 93 DFPGRRAFEWALLLPLAMPAYVVAYAYTDFLQFSGPLQSGLRTAF-GLEGRVIPEVRSVP 151 Query: 130 GAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGA 189 GA +FV +LYPY YLLAR AL ER THLMEAAR+LGAPL+ RI VALPLARPA+AAG Sbjct: 152 GAALVFVFSLYPYVYLLARAALGERATHLMEAARLLGAPLARRIASVALPLARPAVAAGV 211 Query: 190 ALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERRE 249 ALALMETLAD+GVS+YFG+ TFTTGIYKAW+ +D+R+AAAQ A+ LL V +LL LE R Sbjct: 212 ALALMETLADFGVSSYFGIQTFTTGIYKAWLAMDNRIAAAQLATTLLAVVALLLALEHRA 271 Query: 250 QGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEA 309 Q R+RFAA RGGR AEA+ L + A AW VC LPV+LGF+LPV +LR A Sbjct: 272 QQRLRFAAARGGRAGS-AEAQPVRLRGRRAAAAWTVCALPVLLGFLLPVGFMLR---PLA 327 Query: 310 GQGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLA 369 R+ W +NS R G ++A A+VLAL L F+LRSGG L R RLA Sbjct: 328 ADWSVLPWDRFLQWAFNSIRLGVLSAALAVVLALLLSFSLRSGG-----GTLTRGVVRLA 382 Query: 370 GMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVES 429 G+GYA+PG+VI VG+LLPV WLQ PG+ +T + LGV++AYLVRF +VA+QSV+S Sbjct: 383 GLGYAVPGAVIVVGLLLPVGWLQQAAPGSPTVFWVTGTVLGVVWAYLVRFMSVALQSVQS 442 Query: 430 GYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPF 489 GY RIP +LD++AR LG++ + RVH PLL RS A AAL+VFVDV+KELPAT++LRPF Sbjct: 443 GYARIPGNLDDSARMLGTAGLGLLARVHWPLLRRSAAAAALLVFVDVMKELPATMVLRPF 502 Query: 490 DTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRAL 532 +TDTLAV+A+ LARDERLGEAALP+L++VL GL PV+L+ R L Sbjct: 503 NTDTLAVVAYQLARDERLGEAALPSLALVLAGLIPVMLLSRTL 545 >ref|YP_981089.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] gb|ABM36168.1| binding-protein-dependent transport systems inner membrane component [Polaromonas naphthalenivorans CJ2] Length = 540 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 288/499 (57%), Positives = 356/499 (71%), Gaps = 20/499 (4%) Query: 18 ILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRG 77 ++ +W D+E L Q +TVLP Y TS L L+V GV VG ATA V+LFEF G Sbjct: 29 VVLSWLAFDSEARSILTQMLQTVLPDYTWTSLLLCLLVGAGVAGVGMATASAVTLFEFPG 88 Query: 78 RRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLPGAIC 133 RR F WALLLP+AMPAYV AYAYTDFLQY G +Q+ LR F G + EVR L GA+ Sbjct: 89 RRVFEWALLLPLAMPAYVLAYAYTDFLQYGGPLQTALRSAF-GLQGRLLPEVRSLGGAVL 147 Query: 134 MFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALAL 193 +F LYPY YLLAR ALSER HLMEAAR+LGAPLS RI +VALPLARPA+AAG ALAL Sbjct: 148 VFTAALYPYVYLLARTALSERAAHLMEAARLLGAPLSRRIRQVALPLARPAVAAGVALAL 207 Query: 194 METLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRM 253 METLAD+GVS+YFG+ TFT GIYKAW+ +D+R+AAAQ A+LLL+FV VLL +E Q RM Sbjct: 208 METLADFGVSSYFGIQTFTAGIYKAWLSMDNRMAAAQLATLLLIFVAVLLRIEHSAQQRM 267 Query: 254 RFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLR---LWWSEAG 310 RFAA RG R A+A L + ALAW+VC P+ GFVLPV +LR L W Sbjct: 268 RFAAGRGARAGS-ADAAPVQLKGGRAALAWVVCAAPIAFGFVLPVLFMLRPLVLGWDN-- 324 Query: 311 QGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAG 370 + +D ++A W NS R ++A+ A LA+ L FA+R R AL R +LA Sbjct: 325 --LLWD--QFASWTLNSLRLASLSAVLATALAMGLAFAVR-----RQPDALTRGMVQLAS 375 Query: 371 MGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESG 430 +GYA+PG+VI VG+LLPV WLQ+ P G G +TA+ LGV++AYLVRF AVA+QS++SG Sbjct: 376 LGYAVPGAVIVVGLLLPVGWLQAAAPQTGAGYWVTATVLGVVWAYLVRFCAVALQSIQSG 435 Query: 431 YTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFD 490 Y+RIP+S D++AR LG++ A + RVH PLL RS+AVA L+VFVDV+KELPATL+LRPF+ Sbjct: 436 YSRIPSSFDDSARMLGTTGAGLLARVHWPLLRRSVAVAGLLVFVDVMKELPATLVLRPFN 495 Query: 491 TDTLAVIAHNLARDERLGE 509 +DTLAV+ + LARDERLGE Sbjct: 496 SDTLAVVTYQLARDERLGE 514 >ref|YP_987753.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] gb|ABM43677.1| binding-protein-dependent transport systems inner membrane component [Acidovorax sp. JS42] Length = 552 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 293/505 (58%), Positives = 364/505 (72%), Gaps = 16/505 (3%) Query: 33 LRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRGRRWFSWALLLPMAMP 92 LR A TVLPGYL T+ WL L V +G VVG A A V+LF+FRGRR W LLLP+AMP Sbjct: 54 LRAMATTVLPGYLWTTLWLGLAVAVGAAVVGTACAAAVTLFDFRGRRSLEWLLLLPLAMP 113 Query: 93 AYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLPGAICMFVLTLYPYAYLLAR 148 AYV+AYAYTDFLQ++G +Q LR F G EVR L GA+ +F+ +LYPY YLLAR Sbjct: 114 AYVTAYAYTDFLQFSGPLQVGLRATF-GLEGRLLPEVRSLGGAVWVFIFSLYPYVYLLAR 172 Query: 149 NALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALALMETLADYGVSAYFGL 208 AL ER HLMEAAR+LGA + RI VALPLARPA+AAG AL LMETLAD+GV+AYFG+ Sbjct: 173 TALGERAAHLMEAARLLGASPARRIRSVALPLARPAVAAGVALVLMETLADFGVAAYFGI 232 Query: 209 TTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRMRFAATRGGRGHDGA- 267 TFTTGIYKAW+ +DDRLAAAQ A++LL+ V +LL LE R Q RMRFA GG GH G+ Sbjct: 233 QTFTTGIYKAWLSMDDRLAAAQLATVLLVLVVLLLQLELRAQRRMRFAT--GGVGHAGST 290 Query: 268 EARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEAGQGMGFDVGRYAGWVWNS 327 EA+ L A AWLVC LPV++GFV PV +LR A R+ W NS Sbjct: 291 EAQPTRLHGASAVAAWLVCALPVLMGFVAPVLFMLR---PLAADWSVLPWSRFIEWAGNS 347 Query: 328 FRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAGMGYAIPGSVIAVGILLP 387 R GG+ A+ A+ +AL L FA+R R + AL R +L +GYA+PG+VI VG+LLP Sbjct: 348 VRLGGITAVLAVGIALVLAFAVR-----RRRDALTRGVVQLVSLGYAVPGAVIVVGLLLP 402 Query: 388 VAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGS 447 V W+Q+ PG GL ++TA+++G+++AYLVRF AVA+QSV+SGY R+ SLD++AR LG Sbjct: 403 VGWMQAAAPGWGLPAIITATAVGIVWAYLVRFCAVALQSVQSGYARVSPSLDDSARMLGV 462 Query: 448 SRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERL 507 + RVH PLL RS A AAL+VFVDV+KELPAT++LRPF++DTLAV+A+ LARDERL Sbjct: 463 GSLGVLTRVHWPLLKRSTAAAALLVFVDVMKELPATMVLRPFNSDTLAVVAYQLARDERL 522 Query: 508 GEAALPALSIVLVGLAPVLLVMRAL 532 GEAALP+L++V VGL PV+L+ R L Sbjct: 523 GEAALPSLALVAVGLVPVILLSRTL 547 >ref|YP_004389733.1| ABC transporter integral membrane subunit [Alicycliphilus denitrificans K601] gb|AEB86217.1| ABC-type transporter, integral membrane subunit [Alicycliphilus denitrificans K601] Length = 561 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 300/508 (59%), Positives = 364/508 (71%), Gaps = 16/508 (3%) Query: 33 LRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRGRRWFSWALLLPMAMP 92 LR A TVLP YL T+ WL L V +G VVG ATA V+LF+FRGRR W LLLP+AMP Sbjct: 63 LRDMAATVLPDYLWTTLWLGLSVAVGAAVVGTATAAAVTLFDFRGRRQLEWLLLLPLAMP 122 Query: 93 AYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLPGAICMFVLTLYPYAYLLAR 148 AYV+AYAYTDFLQ++G +Q LR F G EVR L GA+ +F+ +LYPY YLLAR Sbjct: 123 AYVTAYAYTDFLQFSGPLQVWLRATF-GLEGRLLPEVRSLGGAVWVFIFSLYPYVYLLAR 181 Query: 149 NALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALALMETLADYGVSAYFGL 208 AL ER HLMEAAR+LGA + R+ RVALPLARPA+AAG AL LMETLAD+GV++YFG+ Sbjct: 182 TALGERAAHLMEAARLLGASPARRMRRVALPLARPAVAAGVALVLMETLADFGVASYFGI 241 Query: 209 TTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRMRFAATRGGRGHDG-A 267 TFTTGIYK W+ +DDRLAAAQ A+ LL V +LL LE R Q RMRFA GG G G A Sbjct: 242 QTFTTGIYKTWLSMDDRLAAAQLATFLLALVALLLQLELRAQRRMRFAT--GGVGRAGSA 299 Query: 268 EARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEAGQGMGFDVGRYAGWVWNS 327 EA+ L A AWLVC LPV++GFV PV +LR A R+ W NS Sbjct: 300 EAQPTRLRGPGCAAAWLVCALPVLMGFVAPVLFMLR---PLAADWSVLPWDRFVQWAGNS 356 Query: 328 FRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAGMGYAIPGSVIAVGILLP 387 R GG+ A+ A+ +ALAL FA+R G AL R +L G+GYA+PG+VI VG+LLP Sbjct: 357 VRLGGITAVLAMGIALALAFAVRRRG-----GALTRAVVQLVGLGYAVPGAVIVVGLLLP 411 Query: 388 VAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGS 447 V WLQ+ PG GL LLT +++G+++AYLVRF AVA+QSV+SGY RIPASLD++AR LG Sbjct: 412 VGWLQAAAPGWGLSALLTTTAVGIVWAYLVRFCAVALQSVQSGYARIPASLDDSARMLGV 471 Query: 448 SRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERL 507 + RVH PLL RS A AAL+VFVDV+KELPAT++LRPFD+DTLAV+A+ LARDERL Sbjct: 472 GGMGLLARVHWPLLKRSTAAAALLVFVDVMKELPATIVLRPFDSDTLAVVAYQLARDERL 531 Query: 508 GEAALPALSIVLVGLAPVLLVMRALDGK 535 GEAALP+L++V VGL PV+L+ R L G Sbjct: 532 GEAALPSLALVAVGLVPVILLSRTLRGS 559 >ref|YP_004128224.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] gb|ADV01337.1| binding-protein-dependent transport systems inner membrane component [Alicycliphilus denitrificans BC] Length = 553 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 300/508 (59%), Positives = 365/508 (71%), Gaps = 16/508 (3%) Query: 33 LRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRGRRWFSWALLLPMAMP 92 LR+ A TVLP YL T+ WL L V +G VVG ATA V+LF+FRGRR W LLLP+AMP Sbjct: 55 LREMAATVLPDYLWTTLWLGLSVAVGAAVVGTATAAAVTLFDFRGRRQLEWLLLLPLAMP 114 Query: 93 AYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLPGAICMFVLTLYPYAYLLAR 148 AYV+AYAYTDFLQ++G +Q LR F G EVR L GA+ +F+ +LYPY YLLAR Sbjct: 115 AYVTAYAYTDFLQFSGPLQVWLRATF-GLEGRLLPEVRSLGGAVWVFIFSLYPYVYLLAR 173 Query: 149 NALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALALMETLADYGVSAYFGL 208 AL ER HLMEAAR+LGA + R+ VALPLARPA+AAG AL LMETLAD+GV++YFG+ Sbjct: 174 TALGERAAHLMEAARLLGASPARRMRSVALPLARPAVAAGVALVLMETLADFGVASYFGI 233 Query: 209 TTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRMRFAATRGGRGHDG-A 267 TFTTGIYKAW+ +DDRLAAAQ A+ LL V +LL LE R Q RMRFA GG G G A Sbjct: 234 QTFTTGIYKAWLSMDDRLAAAQLATFLLALVALLLQLELRAQRRMRFAT--GGVGRAGSA 291 Query: 268 EARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEAGQGMGFDVGRYAGWVWNS 327 EA+ L A AWLVC LPV++GFV PV +LR A R+ W NS Sbjct: 292 EAQPTRLRGPGCAAAWLVCALPVLMGFVAPVLFMLR---PLAADWSVLPWDRFVQWAGNS 348 Query: 328 FRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAGMGYAIPGSVIAVGILLP 387 R GG+ A+ A+ +ALAL FA+R G AL R +L G+GYA+PG+VI VG+LLP Sbjct: 349 VRLGGITAVLAMGIALALAFAVRRRG-----GALTRAVVQLVGLGYAVPGAVIVVGLLLP 403 Query: 388 VAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGS 447 V WLQ+ PG GL LLT +++G+++AYLVRF AVA+QSV+SGY RIPASLD++AR LG Sbjct: 404 VGWLQAAAPGWGLSALLTTTAVGIVWAYLVRFCAVALQSVQSGYARIPASLDDSARMLGV 463 Query: 448 SRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERL 507 + RVH PLL RS A AAL+VFVDV+KELPAT++LRPFD+DTLAV+A+ LARDERL Sbjct: 464 GGMGLLARVHWPLLKRSTAAAALLVFVDVMKELPATIVLRPFDSDTLAVVAYQLARDERL 523 Query: 508 GEAALPALSIVLVGLAPVLLVMRALDGK 535 GEAALP+L++V VGL PV+L+ R L G Sbjct: 524 GEAALPSLALVAVGLVPVILLSRTLRGS 551 >ref|YP_002554322.1| binding-protein-dependent transport systems inner membrane component [Acidovorax ebreus TPSY] gb|ACM34322.1| binding-protein-dependent transport systems inner membrane component [Acidovorax ebreus TPSY] Length = 544 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 293/505 (58%), Positives = 364/505 (72%), Gaps = 16/505 (3%) Query: 33 LRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRGRRWFSWALLLPMAMP 92 LR A TVLPGYL T+ WL L V +G VVG A A V+LF+FRGRR W LLLP+AMP Sbjct: 46 LRAMATTVLPGYLWTTLWLGLAVAVGAAVVGTACAAAVTLFDFRGRRSLEWLLLLPLAMP 105 Query: 93 AYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVRGLPGAICMFVLTLYPYAYLLAR 148 AYV+AYAYTDFLQ++G +Q LR F G EVR L GA+ +F+ +LYPY YLLAR Sbjct: 106 AYVTAYAYTDFLQFSGPLQVWLRATF-GLEGRLLPEVRSLGGAVWVFIFSLYPYVYLLAR 164 Query: 149 NALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALALMETLADYGVSAYFGL 208 AL ER HLMEAAR+LGA + RI VALPLARPA+AAG AL LMETLAD+GV+AYFG+ Sbjct: 165 TALGERAAHLMEAARLLGASPARRIRSVALPLARPAVAAGVALVLMETLADFGVAAYFGI 224 Query: 209 TTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRMRFAATRGGRGHDGA- 267 TFTTGIYKAW+ +DDRLAAAQ A++LL+ V +LL LE R Q RMRFA GG GH G+ Sbjct: 225 QTFTTGIYKAWLSMDDRLAAAQLATVLLVLVVLLLQLELRAQRRMRFAT--GGVGHAGST 282 Query: 268 EARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEAGQGMGFDVGRYAGWVWNS 327 EA+ L A AWLVC LPV++GFV PV +LR A R+ W NS Sbjct: 283 EAQPTRLHGASAVAAWLVCALPVLMGFVAPVLFMLR---PLAADWSVLPWSRFIEWAGNS 339 Query: 328 FRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAGMGYAIPGSVIAVGILLP 387 R GG+ A+ A+ +AL L FA+R R + AL R +L +GYA+PG+VI VG+LLP Sbjct: 340 VRLGGITAVLAVGIALVLAFAVR-----RRRDALTRGVVQLVSLGYAVPGAVIVVGLLLP 394 Query: 388 VAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGS 447 V W+Q+ PG GL ++TA+++G+++AYLVRF AVA+QSV+SGY R+ SLD++AR LG Sbjct: 395 VGWMQAAAPGWGLPAIITATAVGIVWAYLVRFCAVALQSVQSGYARVSPSLDDSARMLGV 454 Query: 448 SRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERL 507 + RVH PLL RS A AAL+VFVDV+KELPAT++LRPF++DTLAV+A+ LARDERL Sbjct: 455 GSLGVLTRVHWPLLKRSTAAAALLVFVDVMKELPATMVLRPFNSDTLAVVAYQLARDERL 514 Query: 508 GEAALPALSIVLVGLAPVLLVMRAL 532 GEAALP+L++V VGL PV+L+ R L Sbjct: 515 GEAALPSLALVAVGLVPVILLSRTL 539 >ref|ZP_08403349.1| binding-protein-dependent transport systems inner membrane component [Rubrivivax benzoatilyticus JA2] gb|EGJ11682.1| binding-protein-dependent transport systems inner membrane component [Rubrivivax benzoatilyticus JA2] Length = 524 Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust. Identities = 314/528 (59%), Positives = 381/528 (72%), Gaps = 10/528 (1%) Query: 9 VLIALPILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAV 68 +L+ALP+ G+L AW LDA L+ LR QA TV+ GY A S L L V +GV +VG A Sbjct: 1 MLLALPVFGVLGAWATLDAGALEVLRHQASTVMAGYAAQSLLLVLGVGVGVALVGTGAAA 60 Query: 69 TVSLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLR---GWFPGFRMEV 125 V+LF+F GRR WALLLP+AMPAYV AYA+TD LQY+G +Q LR G +V Sbjct: 61 AVTLFDFPGRRVLEWALLLPLAMPAYVLAYAWTDALQYSGPIQVALRALTGAQGALWPDV 120 Query: 126 RGLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPLARPAL 185 R L GA+ +FVL LYPY YLLAR AL ER +MEAAR+LGA L R++ VALPLARPA+ Sbjct: 121 RSLWGAVLLFVLCLYPYVYLLARTALGERAAPMMEAARLLGAGLRRRVLEVALPLARPAI 180 Query: 186 AAGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWL 245 AAG ALALMETLADYGV +YFGLTTF+TGIYKAW+V+DDR+AAAQ AS+LL V +LL + Sbjct: 181 AAGIALALMETLADYGVGSYFGLTTFSTGIYKAWLVMDDRVAAAQLASMLLAVVALLLVV 240 Query: 246 ERREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLW 305 ERR Q R+RFAA+R G G A+AR +L A +C LPV+LGFVLPV L L Sbjct: 241 ERRAQKRLRFAASRPG-GAGSADARPLLLRGGAAAAMLALCALPVLLGFVLPVGWLGWLV 299 Query: 306 WSEAG-QGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRL 364 W EA G + R+A W NSF G+AALAA LALAL FALR GG L L Sbjct: 300 WQEATVSEFGLPLPRFAEWARNSFELAGLAALAATALALALGFALRRGG-----GGPLSL 354 Query: 365 TARLAGMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAV 424 AR+ +GYA+PG+VIAVG+LLPVAW+Q +WP A LG L T ++ G++YAYLVRF+AVA+ Sbjct: 355 AARVLSLGYAVPGAVIAVGLLLPVAWVQRVWPEAPLGALFTGTAFGLVYAYLVRFSAVAL 414 Query: 425 QSVESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATL 484 QSVE+GY R+PAS+DE+AR LG + +H+PLL RS AAL+VFVD +KELPATL Sbjct: 415 QSVEAGYARVPASVDESARLLGGGGWRLWRELHLPLLRRSALAAALLVFVDAMKELPATL 474 Query: 485 LLRPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRAL 532 +LRPF DTLAV+A+N ARDERL EAALP+L+IV VGL PVLL+ RAL Sbjct: 475 VLRPFGRDTLAVVAYNFARDERLAEAALPSLAIVAVGLLPVLLLSRAL 522 >ref|ZP_08871105.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter sp. At4] Length = 538 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 300/506 (59%), Positives = 367/506 (72%), Gaps = 15/506 (2%) Query: 33 LRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTVSLFEFRGRRWFSWALLLPMAMP 92 LR+ A TVLPGYL T+ WL L+V LG +VG ATAV VS+F+F GRR F W LLLP+AMP Sbjct: 45 LREMAATVLPGYLWTTLWLGLLVALGTALVGSATAVAVSMFDFPGRRSFEWLLLLPLAMP 104 Query: 93 AYVSAYAYTDFLQYAGVVQSTLR---GWFPGFRMEVRGLPGAICMFVLTLYPYAYLLARN 149 AYV+AYAYTDFLQ++G +Q+ LR G EVR L GA+ +FV TLYPY YLLAR Sbjct: 105 AYVTAYAYTDFLQFSGPLQTGLRDALGLQGRLLPEVRSLGGAVWVFVSTLYPYVYLLART 164 Query: 150 ALSERGTHLMEAARMLGAPLSERIVRVALPLARPALAAGAALALMETLADYGVSAYFGLT 209 AL MEAAR+LGA L RI VALPLARPA+AAG AL LMETLAD+GV++YFG+ Sbjct: 165 ALGAHAAQPMEAARLLGAALPRRIRTVALPLARPAVAAGVALVLMETLADFGVASYFGMQ 224 Query: 210 TFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLERREQGRMRFAATRGGRGHDGAEA 269 T +TGIYKAW+ +D+RLAAAQ A+LLL V LL +ERR Q RMRFA+ H A+A Sbjct: 225 TISTGIYKAWLSMDNRLAAAQLATLLLAVVLALLHVERRAQERMRFASG----SHRAAQA 280 Query: 270 RLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWWSEAGQGMGFDVGRYAGWVWNSFR 329 + L AQ AW+VC LPVV+GFV PVA +LR A R+ W WNS R Sbjct: 281 QPLALHGAQRWAAWVVCALPVVMGFVAPVACMLR---PLAADWSVLPWERFLHWAWNSLR 337 Query: 330 FGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTARLAGMGYAIPGSVIAVGILLPVA 389 G+ AL A+ +ALAL ALR R A+ R +LAGMGYA+PG+VI VG+LLPV Sbjct: 338 LSGITALLAVAIALALALALR-----RRPDAVTRGVLQLAGMGYAVPGTVIVVGLLLPVG 392 Query: 390 WLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGSSR 449 WLQ+ P GLG L+T ++LG+++AYLVRF+AVA+QS++SGY RIP SLD++AR LGSS Sbjct: 393 WLQAALPQWGLGALVTTTALGIVWAYLVRFSAVALQSIQSGYARIPLSLDDSARLLGSSG 452 Query: 450 AVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERLGE 509 + RVH PLL RS A AAL+VFVD +KELPAT++LRPFD+DTLAV+A+ LARDERLGE Sbjct: 453 CGLLARVHWPLLKRSSAAAALLVFVDAMKELPATMVLRPFDSDTLAVVAYQLARDERLGE 512 Query: 510 AALPALSIVLVGLAPVLLVMRALDGK 535 AALP+L++V VGLAPVLL+ RAL + Sbjct: 513 AALPSLALVAVGLAPVLLLSRALRSR 538 >ref|YP_004233356.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX44789.1| binding-protein-dependent transport systems inner membrane component [Acidovorax avenae subsp. avenae ATCC 19860] Length = 543 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 301/532 (56%), Positives = 381/532 (71%), Gaps = 17/532 (3%) Query: 14 PILGILCAWFGLD---AEGLDALRQQAETVLPGYLATSGWLALMVTLGVVVVGGATAVTV 70 P+L + +W AE L LR+ A TVLP YLAT+ WLA+ V G +VG ATA V Sbjct: 22 PVLAVFASWLPWGHGGAESLAILREMAATVLPDYLATTVWLAIAVGAGAALVGTATAAAV 81 Query: 71 SLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLRGWFPGFR----MEVR 126 +LF+FRGRR W LLLP+AMPAYV+AYAYTDFLQ++G +Q LR + G EVR Sbjct: 82 TLFDFRGRRTLEWLLLLPLAMPAYVTAYAYTDFLQFSGPLQVWLRATY-GLEGRLLPEVR 140 Query: 127 GLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPLARPALA 186 L GA+ +F+ +LYPY YLLAR AL ER HLMEAAR+LGAPL+ R+ VALPLARPA+A Sbjct: 141 SLGGAVWVFIFSLYPYVYLLARTALGERAAHLMEAARLLGAPLARRVRTVALPLARPAVA 200 Query: 187 AGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVTVLLWLE 246 AG ALALMETLAD+GV++YFG+ TFTTGIYKAW+ +D+RLAAAQ A+LLL+ V VLL LE Sbjct: 201 AGVALALMETLADFGVASYFGIQTFTTGIYKAWLSMDNRLAAAQLATLLLVLVVVLLQLE 260 Query: 247 RREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAILLRLWW 306 +R Q RMRFA + GR AEA+ L+ + A AWLVCGLPVV+GF PVA +LR Sbjct: 261 QRAQRRMRFATSGVGRAGS-AEAQPQRLAGWRCAAAWLVCGLPVVMGFFAPVAFMLR--- 316 Query: 307 SEAGQGMGFDVGRYAGWVWNSFRFGGMAALAAIVLALALCFALRSGGLPRLQAALLRLTA 366 A R+ W +S R G + A+ A+ +ALAL FA+R R L R Sbjct: 317 PLAADWSVLPWDRFVEWAGHSVRLGAITAVLAVGVALALAFAVR-----RRAGRLTRGVV 371 Query: 367 RLAGMGYAIPGSVIAVGILLPVAWLQSLWPGAGLGVLLTASSLGVIYAYLVRFTAVAVQS 426 +LA +GYA+PG+VI VG+LLPV WLQ+ P + L+TA+++G+++AYLVRF AVA+QS Sbjct: 372 QLASVGYAVPGAVIVVGLLLPVGWLQAAVPEWRVPALITATAVGIVWAYLVRFCAVALQS 431 Query: 427 VESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAALMVFVDVVKELPATLLL 486 V+SGY RIP SLD++AR LG+ + RVH PLL RS A AAL+VFVDV+KELPAT++L Sbjct: 432 VQSGYARIPGSLDDSARMLGTGGLGLLARVHWPLLRRSTAAAALLVFVDVMKELPATMVL 491 Query: 487 RPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVMRALDGKRSQ 538 RPF++DTLAV+A+ LARDERLGEAALP+L++V VGL PV+L+ R L S+ Sbjct: 492 RPFNSDTLAVVAYQLARDERLGEAALPSLALVAVGLVPVILLSRTLRATNSR 543