BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0031.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776711.1| ABC transporter permease [Herbaspirillum ser... 469 e-130 ref|YP_001172341.1| taurine ABC transporter, permease protein [P... 385 e-105 ref|NP_880426.1| putative permease of ABC transporter [Bordetell... 382 e-104 ref|NP_889564.1| permease of ABC transporter [Bordetella bronchi... 382 e-104 ref|ZP_06688085.1| conserved hypothetical protein [Achromobacter... 382 e-104 ref|NP_885244.1| putative permease of ABC transporter [Bordetell... 381 e-104 ref|YP_003979459.1| binding-protein-dependent transporter inner ... 380 e-103 ref|YP_004415982.1| putative permease of ABC transporter [Pusill... 378 e-103 ref|YP_004754195.1| putative permease [Collimonas fungivorans Te... 375 e-102 gb|EGP43905.1| binding-protein-dependent transport system inner ... 374 e-102 >ref|YP_003776711.1| ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64803.1| ABC-type transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 241/242 (99%), Positives = 241/242 (99%) Query: 1 MVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGS 60 MVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFR ALFGSLYRLGMGYGS Sbjct: 16 MVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRLALFGSLYRLGMGYGS 75 Query: 61 ALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAA 120 ALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAA Sbjct: 76 ALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAA 135 Query: 121 FFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRA 180 FFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRA Sbjct: 136 FFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRA 195 Query: 181 LISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQ 240 LISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQ Sbjct: 196 LISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQ 255 Query: 241 YV 242 YV Sbjct: 256 YV 257 >ref|YP_001172341.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] ref|YP_004714093.1| taurine ABC transporter permease [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|ABP79499.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri A1501] gb|AEA83747.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri DSM 4166] gb|AEJ05004.1| taurine ABC transporter, permease protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 257 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 193/241 (80%), Positives = 214/241 (88%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VLAI+FILL+WQ AAWSLP+FLMPG+P+V RL +Q FR L+GS+ RLG GYG A Sbjct: 17 VLAILFILLIWQAAAWSLPAFLMPGIPTVVERLITTIQQPEFRDGLYGSMSRLGSGYGFA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L+ GIGFGLVG VLFFFRE+L+SAIVILQSIPSIAWVPLFLI+MGFGNLPI+VVVA+AAF Sbjct: 77 LLFGIGFGLVGGVLFFFREILRSAIVILQSIPSIAWVPLFLIVMGFGNLPIIVVVALAAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FP ALSVMNATESVQ VHVSAARVMGASR +LRRVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPMALSVMNATESVQPVHVSAARVMGASRWQLLRRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFG+GLGR+LAYSGE ADMVGVM NIL IAILA LIDQV+LE K R+L+YQY Sbjct: 197 ISAEMLIGFGQGLGRSLAYSGEIADMVGVMMNILVIAILATLIDQVVLEKFKQRMLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257 >ref|NP_880426.1| putative permease of ABC transporter [Bordetella pertussis Tohama I] emb|CAE41996.1| putative permease of ABC transporter [Bordetella pertussis Tohama I] gb|AEE67042.1| putative permease of ABC transporter [Bordetella pertussis CS] Length = 257 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/241 (78%), Positives = 215/241 (89%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FIL +WQ AAW LP FLMPGVP+VA RL E++ ++F +L G+L RLG GYG A Sbjct: 17 VLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLGAGYGLA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFGN PI+VVVA++AF Sbjct: 77 LAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPIIVVVALSAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+R +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPAALSVMNATESVQRVHVSAARVMGATRWGLIKRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 197 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257 >ref|NP_889564.1| permease of ABC transporter [Bordetella bronchiseptica RB50] emb|CAE33520.1| putative permease of ABC transporter [Bordetella bronchiseptica RB50] Length = 257 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 190/241 (78%), Positives = 215/241 (89%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FIL +WQ AAW LP FLMPGVP+VA RL E++ ++F +L G+L RLG GYG A Sbjct: 17 VLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLGAGYGLA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFGN PI+VVVA++AF Sbjct: 77 LAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPIIVVVALSAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+R +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 197 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257 >ref|ZP_06688085.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gb|EFF74991.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 251 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/241 (78%), Positives = 217/241 (90%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FILL+WQ+AA++LP FLMPGVP+V RL+E++ +F +L G+L RLG GYG A Sbjct: 11 VLGVLFILLLWQLAAFALPDFLMPGVPAVVERLFEDLGKQSFHQSLMGTLGRLGAGYGLA 70 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFGN PI+VVVA++AF Sbjct: 71 LAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPIIVVVALSAF 130 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+R +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 131 FPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAFGNAWRAL 190 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 191 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 250 Query: 242 V 242 V Sbjct: 251 V 251 >ref|NP_885244.1| putative permease of ABC transporter [Bordetella parapertussis 12822] emb|CAE38352.1| putative permease of ABC transporter [Bordetella parapertussis] Length = 257 Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust. Identities = 189/241 (78%), Positives = 215/241 (89%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FIL +WQ AAW LP F+MPGVP+VA RL E++ ++F +L G+L RLG GYG A Sbjct: 17 VLGVLFILALWQAAAWVLPDFVMPGVPTVAQRLVEDLGQASFHQSLLGTLGRLGAGYGLA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFGN PI+VVVA++AF Sbjct: 77 LAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPIIVVVALSAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+R +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 197 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257 >ref|YP_003979459.1| binding-protein-dependent transporter inner membrane component family protein 39 [Achromobacter xylosoxidans A8] gb|ADP16744.1| binding-protein-dependent transport system inner membrane component family protein 39 [Achromobacter xylosoxidans A8] Length = 257 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 188/241 (78%), Positives = 216/241 (89%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FIL +WQ+AA++LP FLMPGVP+V RL+E++ +F +L G+L RLG GYG A Sbjct: 17 VLGVLFILALWQLAAFALPDFLMPGVPAVVERLFEDLGKQSFHQSLLGTLGRLGAGYGLA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 L GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFGN PI+VVVA++AF Sbjct: 77 LAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGNTPIIVVVALSAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+R +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 197 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257 >ref|YP_004415982.1| putative permease of ABC transporter [Pusillimonas sp. T7-7] gb|AEC19358.1| putative permease of ABC transporter [Pusillimonas sp. T7-7] Length = 257 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/242 (83%), Positives = 224/242 (92%) Query: 1 MVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGS 60 MV+AI ILL WQIAAWSLP FLMPGVPSV RLWE++QS++FRAAL GSL RLG GYG+ Sbjct: 16 MVVAIAAILLFWQIAAWSLPDFLMPGVPSVMVRLWEDIQSADFRAALSGSLVRLGFGYGA 75 Query: 61 ALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAA 120 AL G+GFGLVG VLFFFREVLKSAI+ILQSIPSIAWVPLFLI+MGFGN+PI+VV+A++A Sbjct: 76 ALAFGVGFGLVGGVLFFFREVLKSAIIILQSIPSIAWVPLFLIMMGFGNMPIIVVIALSA 135 Query: 121 FFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRA 180 FFPAALSVMNATESV VHVSAARVMGASR ML+RVYLPAVMPELITGAQLAFGNAWRA Sbjct: 136 FFPAALSVMNATESVLNVHVSAARVMGASRWDMLKRVYLPAVMPELITGAQLAFGNAWRA 195 Query: 181 LISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQ 240 LISAEML+GFG+GLGR+LAY+GETADM+GVMANILTIAILA LIDQVILENLK R+L+YQ Sbjct: 196 LISAEMLIGFGQGLGRSLAYAGETADMMGVMANILTIAILATLIDQVILENLKRRVLRYQ 255 Query: 241 YV 242 YV Sbjct: 256 YV 257 >ref|YP_004754195.1| putative permease [Collimonas fungivorans Ter331] gb|AEK63372.1| putative permease of ABC transporter [Collimonas fungivorans Ter331] Length = 257 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 197/231 (85%), Positives = 212/231 (91%) Query: 12 WQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSALVLGIGFGLV 71 WQIAAWSLP FLMPGV V RLW+E + FR AL+GSL RLG GY +A++ GIGFGLV Sbjct: 27 WQIAAWSLPDFLMPGVLPVLGRLWQEALTPEFRTALWGSLTRLGGGYAAAMLFGIGFGLV 86 Query: 72 GAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAFFPAALSVMNA 131 GAVLFFFREVLKSAI+ILQSIPSIAWVPLFLILMGFGNLPI+VVVA+AAFFPAALSVMNA Sbjct: 87 GAVLFFFREVLKSAIIILQSIPSIAWVPLFLILMGFGNLPIMVVVAMAAFFPAALSVMNA 146 Query: 132 TESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRALISAEMLVGFG 191 TESVQQVHVSAARVMGA+R ML+RVYLPAVMPELITGAQLAFGNAWRALISAEML+GFG Sbjct: 147 TESVQQVHVSAARVMGATRWDMLKRVYLPAVMPELITGAQLAFGNAWRALISAEMLIGFG 206 Query: 192 KGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQYV 242 KGLGRTLAY+GETADMVGVM NIL IAILAALIDQ ILENLKHR+L+YQYV Sbjct: 207 KGLGRTLAYAGETADMVGVMTNILAIAILAALIDQFILENLKHRVLRYQYV 257 >gb|EGP43905.1| binding-protein-dependent transport system inner membrane component family protein 39 [Achromobacter xylosoxidans AXX-A] Length = 257 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 187/241 (77%), Positives = 215/241 (89%) Query: 2 VLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRAALFGSLYRLGMGYGSA 61 VL ++FIL +WQ AA++LP FLMPGVP+V RL+E++ +F +L G+L RLG GYG A Sbjct: 17 VLGVLFILALWQAAAFALPDFLMPGVPAVLERLFEDLGKQSFHQSLVGTLGRLGAGYGLA 76 Query: 62 LVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILMGFGNLPIVVVVAIAAF 121 LV GIGFGLV AVLFFFREVL+SAIVILQSIPSIAWVPLFLI+MGFG+ PI+VVVA++AF Sbjct: 77 LVAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVMGFGSTPIIVVVALSAF 136 Query: 122 FPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPELITGAQLAFGNAWRAL 181 FPAALSVMNATESVQ+VHVSAARVMGA+ +++RVYLPAVMPELITGAQLAFGNAWRAL Sbjct: 137 FPAALSVMNATESVQRVHVSAARVMGATPWGLVKRVYLPAVMPELITGAQLAFGNAWRAL 196 Query: 182 ISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALIDQVILENLKHRLLKYQY 241 ISAEML+GFGKGLGR+LAYSGE ADM GVM NIL IA+LAALIDQ +LENLKHRLL+YQY Sbjct: 197 ISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALIDQFVLENLKHRLLRYQY 256 Query: 242 V 242 V Sbjct: 257 V 257