BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0099.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774435.1| cupin superfamily protein [Herbaspirillum se... 401 e-110 ref|YP_001811491.1| cupin 2 domain-containing protein [Burkholde... 310 8e-83 ref|ZP_03570617.1| cupin 2, conserved barrel domain protein [Bur... 309 1e-82 ref|ZP_03585435.1| cupin 2, conserved barrel domain protein [Bur... 309 2e-82 ref|ZP_03267420.1| Cupin 2 conserved barrel domain protein [Burk... 300 9e-80 ref|ZP_03544238.1| Cupin 2 conserved barrel domain protein [Coma... 286 8e-76 ref|YP_001119478.1| cupin 2 domain-containing protein [Burkholde... 277 7e-73 ref|NP_773063.1| hypothetical protein bll6423 [Bradyrhizobium ja... 275 2e-72 ref|YP_001417294.1| cupin 2 domain-containing protein [Xanthobac... 274 5e-72 ref|YP_002547321.1| transcriptional regulator protein [Agrobacte... 268 3e-70 >ref|YP_003774435.1| cupin superfamily protein [Herbaspirillum seropedicae SmR1] gb|ADJ62527.1| Cupin_2 family protein [Herbaspirillum seropedicae SmR1] Length = 196 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG Sbjct: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH Sbjct: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV Sbjct: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 Query: 181 DGRYEADIAAQLRKEG 196 DGRYEADIAAQLRKEG Sbjct: 181 DGRYEADIAAQLRKEG 196 >ref|YP_001811491.1| cupin 2 domain-containing protein [Burkholderia ambifaria MC40-6] gb|ACB67275.1| Cupin 2 conserved barrel domain protein [Burkholderia ambifaria MC40-6] Length = 198 Score = 310 bits (794), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 150/192 (78%), Positives = 166/192 (86%), Gaps = 3/192 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFP I RVVTGHD+ GR++V+S+GPLPTVVEIAAIPGTVFHEVWST S+P VDNG Sbjct: 1 MSFPAIRRVVTGHDSDGRAVVASDGPLPTVVEIAAIPGTVFHEVWSTSSSPA---MVDNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 ADPTVG L+L PP GTRMRFVDIPPDT EFLAHG KM DAF+QIG+A ASTV+A SPH Sbjct: 58 ADPTVGVLMLPPPTQGTRMRFVDIPPDTPEFLAHGARKMHDAFSQIGDAAASTVKAGSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTES+DYGVVIEGEMTL+LD EVAL PGSVV+QRGTNHAWANRSGRPCRMLF+LV Sbjct: 118 PLMHRTESIDYGVVIEGEMTLILDDAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLV 177 Query: 181 DGRYEADIAAQL 192 DG Y+ +AA L Sbjct: 178 DGAYDPAVAAML 189 >ref|ZP_03570617.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2M] ref|ZP_03577262.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2] gb|EEE08839.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2] gb|EEE16524.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD2M] Length = 198 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 152/192 (79%), Positives = 167/192 (86%), Gaps = 3/192 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFP I RVVTGHD GR++V+S+GPLPTVVEIAAIPGTVFHEVWST S+P T VDNG Sbjct: 1 MSFPAIRRVVTGHDTDGRAVVASDGPLPTVVEIAAIPGTVFHEVWSTSSSPAT---VDNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 ADPTVGAL+L PP GTRMRFVDIPPDT EFLAHG KM DAF++IG+A ASTVQA SPH Sbjct: 58 ADPTVGALMLPPPRQGTRMRFVDIPPDTPEFLAHGATKMHDAFSEIGDAAASTVQAGSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTESVDYGVVIEGEMTL+LD EVAL PGSVV+QRGTNHAWANRSGRPCRMLF+L+ Sbjct: 118 PLMHRTESVDYGVVIEGEMTLILDDAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLI 177 Query: 181 DGRYEADIAAQL 192 DG Y+ +AA L Sbjct: 178 DGVYDPALAAVL 189 >ref|ZP_03585435.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD1] gb|EEE00027.1| cupin 2, conserved barrel domain protein [Burkholderia multivorans CGD1] Length = 198 Score = 309 bits (791), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 149/192 (77%), Positives = 165/192 (85%), Gaps = 3/192 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFP IHR+VTGHDA+GR+++SS GPLPTVVEIAAIPGTVFHEVWST G PV +DNG Sbjct: 1 MSFPAIHRIVTGHDAEGRAVISSQGPLPTVVEIAAIPGTVFHEVWST---SGNPVSIDNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 ADPTVGAL L PP GTR RFVDIP DT EFLA G +MQ+AFTQ+G+A ASTV+ADSPH Sbjct: 58 ADPTVGALTLPPPPQGTRFRFVDIPSDTSEFLARGATRMQEAFTQVGDAHASTVRADSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTES+DYGVVIEGEMTLVLD EVAL PGSVV+QRGTNHAWANRSGRPCRMLF+L+ Sbjct: 118 PLMHRTESIDYGVVIEGEMTLVLDDSEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLI 177 Query: 181 DGRYEADIAAQL 192 DG Y+ IA L Sbjct: 178 DGVYDPAIADAL 189 >ref|ZP_03267420.1| Cupin 2 conserved barrel domain protein [Burkholderia sp. H160] gb|EEA01002.1| Cupin 2 conserved barrel domain protein [Burkholderia sp. H160] Length = 198 Score = 300 bits (767), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 145/192 (75%), Positives = 163/192 (84%), Gaps = 3/192 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFP I RVVTGHD G+++V S+G LP V +IAAIPGTVFHEVWST +TP +DNG Sbjct: 1 MSFPAIRRVVTGHDPNGQAVVVSDGALPNVAQIAAIPGTVFHEVWSTSATPA---PLDNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 ADPTVGAL+L PP HGTRMRFVDIPPDT EFLAHG ++ DAF+QIG+A ASTV+ DSPH Sbjct: 58 ADPTVGALMLPPPKHGTRMRFVDIPPDTAEFLAHGATRVHDAFSQIGDAAASTVRTDSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTES+DYGVVIEGEMTLVLD EVAL PGSVV+QRGTNHAWANRSGRPCRMLF+L+ Sbjct: 118 PLMHRTESIDYGVVIEGEMTLVLDAAEVALAPGSVVIQRGTNHAWANRSGRPCRMLFVLI 177 Query: 181 DGRYEADIAAQL 192 DG Y +IAA L Sbjct: 178 DGAYAPEIAAAL 189 >ref|ZP_03544238.1| Cupin 2 conserved barrel domain protein [Comamonas testosteroni KF-1] gb|EED68524.1| Cupin 2 conserved barrel domain protein [Comamonas testosteroni KF-1] Length = 191 Score = 286 bits (733), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 141/194 (72%), Positives = 161/194 (82%), Gaps = 4/194 (2%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MS PPI R+VTGHD QGR+I++S+GPLPT VEIAAIPGTVFHEVW+T +TP VDNG Sbjct: 1 MSLPPIERIVTGHDDQGRAIITSHGPLPTAVEIAAIPGTVFHEVWATHATPA---PVDNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 DPT+ L+L PP +GTR+RFVDIPPDT E LA +M +AFTQIG+A ASTVQADSPH Sbjct: 58 TDPTLAELMLPPPQNGTRIRFVDIPPDTAELLAQDRSEMLNAFTQIGDAAASTVQADSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQG-EVALKPGSVVVQRGTNHAWANRSGRPCRMLFIL 179 PLMHRT+SVDYGVVIEGE+TLVLD G EV L+PG+VVVQRGTNHAWANRS RPCRMLF+L Sbjct: 118 PLMHRTQSVDYGVVIEGELTLVLDSGAEVLLRPGNVVVQRGTNHAWANRSSRPCRMLFVL 177 Query: 180 VDGRYEADIAAQLR 193 VDG Y IA+ L Sbjct: 178 VDGAYHPAIASLLE 191 >ref|YP_001119478.1| cupin 2 domain-containing protein [Burkholderia vietnamiensis G4] gb|ABO54643.1| Cupin 2, conserved barrel domain protein [Burkholderia vietnamiensis G4] Length = 198 Score = 277 bits (708), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 141/192 (73%), Positives = 159/192 (82%), Gaps = 3/192 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSF I RVVTGHDA GR+IV S+GPL TV EIAAIPGTVFHEVWST +P V+NG Sbjct: 1 MSFSTIRRVVTGHDANGRAIVMSDGPLSTVAEIAAIPGTVFHEVWSTSESPAV---VNNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 +DPT+G L+L PP +GTR+RFVDIPPDT EFLAHG M AF+QIG+A ASTVQADSPH Sbjct: 58 SDPTIGELMLPPPRYGTRVRFVDIPPDTPEFLAHGAAAMHAAFSQIGDADASTVQADSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTES+DYGVVIEGEMTL+LD EV LK G+VV+QRGTNHAWANRSGR CRMLF+L+ Sbjct: 118 PLMHRTESIDYGVVIEGEMTLILDGAEVVLKQGNVVIQRGTNHAWANRSGRMCRMLFVLI 177 Query: 181 DGRYEADIAAQL 192 DG Y+ IAA L Sbjct: 178 DGVYDPAIAAAL 189 >ref|NP_773063.1| hypothetical protein bll6423 [Bradyrhizobium japonicum USDA 110] dbj|BAC51688.1| bll6423 [Bradyrhizobium japonicum USDA 110] Length = 194 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 126/188 (67%), Positives = 158/188 (84%), Gaps = 3/188 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MS PI RVVTGHDA G ++++++ LPTVVE+AAIPGT+FHEVWST +TP V +DNG Sbjct: 3 MSLAPIRRVVTGHDAHGDAVIATDDALPTVVELAAIPGTIFHEVWSTAATP---VSIDNG 59 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 DPT+GAL L PP HGTR+RFVDIPPDT++FL HG +M++AF+Q+G+ ASTV+ DSPH Sbjct: 60 PDPTIGALRLPPPTHGTRIRFVDIPPDTEDFLKHGAARMKEAFSQVGDVHASTVRPDSPH 119 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRTE+VDYG+VI GE+TLVLD+ E LK G VV+QRGTNHAWANRSG+PCRMLF+LV Sbjct: 120 PLMHRTETVDYGIVISGEITLVLDKSEANLKAGDVVIQRGTNHAWANRSGKPCRMLFMLV 179 Query: 181 DGRYEADI 188 DG++ ++ Sbjct: 180 DGQFSDEV 187 >ref|YP_001417294.1| cupin 2 domain-containing protein [Xanthobacter autotrophicus Py2] gb|ABS67637.1| Cupin 2 conserved barrel domain protein [Xanthobacter autotrophicus Py2] Length = 192 Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 132/193 (68%), Positives = 158/193 (81%), Gaps = 3/193 (1%) Query: 1 MSFPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNG 60 MSFPPI RVVTGHDA+ ++I+ ++G LP VVE+A IPGT+FHEVWST G+P V NG Sbjct: 1 MSFPPIRRVVTGHDAEAQAIIVTDGALPHVVELAHIPGTIFHEVWSTA---GSPAPVGNG 57 Query: 61 ADPTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPH 120 DPT+GAL L PP +GTR+RFVDIPPDTDEF+ HG +M AF +IG+A ASTV+ SPH Sbjct: 58 PDPTLGALSLPPPENGTRIRFVDIPPDTDEFMLHGAARMTAAFAEIGDASASTVKLHSPH 117 Query: 121 PLMHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILV 180 PLMHRT+S+DYG+VI GEMTLVLD+GE L+ G VV+QRGTNHAWANRSG+PCRMLFILV Sbjct: 118 PLMHRTQSIDYGIVISGEMTLVLDRGETLLRQGDVVIQRGTNHAWANRSGQPCRMLFILV 177 Query: 181 DGRYEADIAAQLR 193 DGRY+ +IA R Sbjct: 178 DGRYDPEIAPDGR 190 >ref|YP_002547321.1| transcriptional regulator protein [Agrobacterium vitis S4] gb|ACM38605.1| transcriptional regulator protein [Agrobacterium vitis S4] Length = 193 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 133/190 (70%), Positives = 152/190 (80%), Gaps = 3/190 (1%) Query: 3 FPPIHRVVTGHDAQGRSIVSSNGPLPTVVEIAAIPGTVFHEVWSTFSTPGTPVQVDNGAD 62 FP I R+VTGH + GRSI+S GPLP VVEI AIPGTVFHEVWST +P V++DN D Sbjct: 4 FPDITRIVTGHASDGRSILSEVGPLPKVVEIDAIPGTVFHEVWSTGESP---VRIDNRTD 60 Query: 63 PTVGALVLSPPAHGTRMRFVDIPPDTDEFLAHGHHKMQDAFTQIGEAQASTVQADSPHPL 122 PT+G LVL PPA GTR+RFVDIPPDT++FL G +M AF Q+G+ ASTV+ SPHPL Sbjct: 61 PTLGPLVLPPPAGGTRIRFVDIPPDTEDFLKTGAERMNVAFEQLGDKAASTVEEHSPHPL 120 Query: 123 MHRTESVDYGVVIEGEMTLVLDQGEVALKPGSVVVQRGTNHAWANRSGRPCRMLFILVDG 182 MHRTESVDYG+VIEGEMTLVLD GEV LK GSVV+QRGTNHAWANRSG+ CRMLFIL+ G Sbjct: 121 MHRTESVDYGIVIEGEMTLVLDDGEVLLKQGSVVIQRGTNHAWANRSGKTCRMLFILIAG 180 Query: 183 RYEADIAAQL 192 Y+ IAA L Sbjct: 181 VYDPAIAASL 190