BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0073.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774418.1| metal ion ABC transporter permease [Herbaspi... 418 e-115 ref|YP_004754370.1| methionine ABC transporter permease [Collimo... 319 2e-85 ref|ZP_03271075.1| binding-protein-dependent transport systems i... 306 1e-81 ref|YP_003605787.1| binding-protein-dependent transport systems ... 304 5e-81 ref|YP_001896605.1| binding-protein-dependent transporters inner... 303 1e-80 ref|YP_004028389.1| ABC transporter permease [Burkholderia rhizo... 299 2e-79 ref|YP_001856995.1| binding-protein-dependent transport systems ... 299 2e-79 ref|ZP_02884891.1| binding-protein-dependent transport systems i... 289 2e-76 ref|YP_549187.1| binding-protein-dependent transport systems inn... 289 3e-76 ref|YP_560003.1| ABC methionine transporter, inner membrane subu... 288 3e-76 >ref|YP_003774418.1| metal ion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ62510.1| ABC-type metal ion transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 217 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 217/217 (100%), Positives = 217/217 (100%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV Sbjct: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV Sbjct: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 >ref|YP_004754370.1| methionine ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK63547.1| Methionine ABC transporter permease protein [Collimonas fungivorans Ter331] Length = 217 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/217 (87%), Positives = 208/217 (95%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 MSSE++DLF+SSFGETLMMV ISG++G+LLG+PLGIALH+T GVLP+ FNR+AGL+V Sbjct: 1 MSSEMLDLFLSSFGETLMMVGISGILGALLGVPLGIALHLTGRDGVLPHPLFNRVAGLIV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TRFFVGTSIGTAAAIVPLTIA+APFIARLVETALREV+ GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVERGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATTWQI+YKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTWQIVYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVML VV+ILIVFVQLVQ+LGD+LVR+LSHR Sbjct: 181 YQRFLPEVMLLVVVILIVFVQLVQTLGDILVRRLSHR 217 >ref|ZP_03271075.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] gb|EDZ97345.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. H160] Length = 217 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 172/217 (79%), Positives = 198/217 (91%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISG++G+++G+PLG+ L++T+ +GVL NVA NR+ G++V Sbjct: 1 MLSEMFDMFVQSFWETLIMVGISGLIGAVVGVPLGVLLYLTDRQGVLENVAVNRVMGVIV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGTAAAIVPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAIVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT QI++KVL+PE+ G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVMLAVVLILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSFGDWLVRRLSHK 217 >ref|YP_003605787.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] gb|ADG16276.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. CCGE1002] Length = 217 Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 171/217 (78%), Positives = 197/217 (90%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISG++G+++G+PLG+ L++T+ +GVL NVA NR+ G++V Sbjct: 1 MLSEMFDMFVQSFWETLIMVGISGLIGAVVGVPLGVLLYLTDRQGVLENVAVNRVMGVIV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGTAAAIVPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAIVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGAT QI++KVL+PE+ G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATASQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVMLAVVLILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSFGDWLVRRLSHK 217 >ref|YP_001896605.1| binding-protein-dependent transporters inner membrane component [Burkholderia phytofirmans PsJN] gb|ACD17381.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phytofirmans PsJN] Length = 217 Score = 303 bits (775), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 170/217 (78%), Positives = 196/217 (90%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISG+VG+L+G+PLG+ L++T+ +GVL N+A NR G++V Sbjct: 1 MLSEMFDMFVQSFWETLVMVGISGLVGALVGLPLGVVLYLTDRQGVLQNIAVNRAMGVIV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGTAAA+VPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT QI++KVL+PE+ G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVML VV+ILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK 217 >ref|YP_004028389.1| ABC transporter permease [Burkholderia rhizoxinica HKI 454] emb|CBW74245.1| ABC transporter permease protein [Burkholderia rhizoxinica HKI 454] Length = 217 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 167/217 (76%), Positives = 192/217 (88%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISGV+G +G+PLG+ LH++E GVL NV NR+ G+ + Sbjct: 1 MWSEMFDMFVQSFWETLIMVGISGVIGGAIGLPLGVLLHLSERGGVLQNVLLNRVLGMTI 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGT AA+VPLTIAAAPF+ARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTVAAVVPLTIAAAPFVARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT Q+++KVL+PEA+ GIVAGLT+TFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQVVFKVLLPEAWPGIVAGLTLTFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVM AVVL+LIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMFAVVLVLIVFVQLVQSFGDYLVRRLSHK 217 >ref|YP_001856995.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] gb|ACC69949.1| binding-protein-dependent transport systems inner membrane component [Burkholderia phymatum STM815] Length = 217 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 168/217 (77%), Positives = 195/217 (89%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISG++G+ +G+PLG+AL++T+ +GVL N+ FNR G++V Sbjct: 1 MLSEMFDMFVQSFWETLIMVGISGLIGAAVGLPLGVALYLTDRQGVLQNLPFNRAMGVVV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRS PFIILLVAVIP TR VG+SIGTAAA+VPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSVPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT QI++KVL+PE+ GIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVM+ VV+ILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMVTVVVILIVFVQLVQSFGDWLVRRLSHK 217 >ref|ZP_02884891.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] gb|EDT09685.1| binding-protein-dependent transport systems inner membrane component [Burkholderia graminis C4D1M] Length = 217 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 171/217 (78%), Positives = 197/217 (90%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE+ D+FV SF ETL+MV ISG+VG+L+G+PLG+ L++T+ +GVL NVA NR+ G++V Sbjct: 1 MLSEMFDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNVAVNRVVGMVV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGTAAA+VPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT QI++KVL+PE+ G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVML VV+ILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK 217 >ref|YP_549187.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] gb|ABE44289.1| binding-protein-dependent transport systems inner membrane component [Polaromonas sp. JS666] Length = 221 Score = 289 bits (739), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 165/216 (76%), Positives = 190/216 (87%) Query: 2 SSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLVN 61 S L++LFVSS ET++MV ISG+VG+L+G+PLG+ L +T+ GVL N NR+ G +VN Sbjct: 6 SQALLELFVSSLWETIIMVGISGLVGALIGVPLGVFLRLTDEGGVLQNAGVNRVVGGIVN 65 Query: 62 AVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLVE 121 AVRSTPFIILLVA+IP+TR F G+SIGTAAA+VPLTIAAAPFIARLVET+LREVDHGL+E Sbjct: 66 AVRSTPFIILLVAIIPLTRLFTGSSIGTAAAVVPLTIAAAPFIARLVETSLREVDHGLIE 125 Query: 122 AAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGY 181 AA AMGATT QI+ KVL+PEA GIVAGLTITFVSL GYSAMAGAIGGGGLGDLGIRYGY Sbjct: 126 AALAMGATTRQIVLKVLLPEALPGIVAGLTITFVSLTGYSAMAGAIGGGGLGDLGIRYGY 185 Query: 182 QRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 QRFLPEVMLAVVL+LI+FVQ VQSLGD VR+LSH+ Sbjct: 186 QRFLPEVMLAVVLVLILFVQAVQSLGDWAVRRLSHK 221 >ref|YP_560003.1| ABC methionine transporter, inner membrane subunit [Burkholderia xenovorans LB400] ref|ZP_06842768.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] gb|ABE31951.1| ABC methionine transporter, inner membrane subunit [Burkholderia xenovorans LB400] gb|EFG69492.1| binding-protein-dependent transport systems inner membrane component [Burkholderia sp. Ch1-1] Length = 217 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 170/217 (78%), Positives = 198/217 (91%) Query: 1 MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60 M SE++D+FV SF ETL+MV ISG+VG+L+G+PLG+ L++T+ +GVL N+A NR+ G++V Sbjct: 1 MLSEMLDMFVQSFWETLVMVGISGLVGALVGLPLGVLLYLTDRQGVLQNIAVNRVMGVVV 60 Query: 61 NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120 NAVRSTPFIILLVAVIP TR VG+SIGTAAA+VPLTIAAAPFIARLVETALREVD GL+ Sbjct: 61 NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI 120 Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 EAAQAMGATT QI++KVL+PE+ G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180 Query: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217 YQRFLPEVML VV+ILIVFVQLVQS GD LVR+LSH+ Sbjct: 181 YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK 217