BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0055.p (123 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776744.1| lipoprotein [Herbaspirillum seropedicae SmR1... 251 2e-65 gb|EGH62411.1| putative lipoprotein [Pseudomonas syringae pv. ma... 142 1e-32 ref|YP_260797.1| putative lipoprotein [Pseudomonas fluorescens P... 141 4e-32 ref|YP_003749559.1| lipoprotein [Ralstonia solanacearum PSI07] >... 141 4e-32 emb|CCA80284.1| putative lipoprotein [blood disease bacterium R229] 140 5e-32 ref|YP_003747943.1| lipoprotein [Ralstonia solanacearum CFBP2957... 140 9e-32 ref|ZP_00944361.1| Putative periplasmic protein [Ralstonia solan... 139 1e-31 emb|CCA87838.1| putative lipoprotein [Ralstonia syzygii R24] 137 6e-31 gb|EGH20394.1| putative lipoprotein [Pseudomonas syringae pv. mo... 135 2e-30 ref|NP_522235.1| lipoprotein [Ralstonia solanacearum GMI1000] >g... 135 2e-30 >ref|YP_003776744.1| lipoprotein [Herbaspirillum seropedicae SmR1] gb|ADJ64836.1| lipoprotein [Herbaspirillum seropedicae SmR1] Length = 123 Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 122/123 (99%) Query: 1 MMNKKLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEEN 60 MMNKKLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEEN Sbjct: 1 MMNKKLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEEN 60 Query: 61 LQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 LQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLI ALQTEKALFPESTAYMDFLMNNYRKG Sbjct: 61 LQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLILALQTEKALFPESTAYMDFLMNNYRKG 120 Query: 121 ATK 123 ATK Sbjct: 121 ATK 123 >gb|EGH62411.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 125 Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 1/106 (0%) Query: 18 LSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKMRARDEAVPPGYHA 77 ++GCA Q PKTLY WG+YQ ++Y +FKNEG EA++A LEE+LQK+RA + PPGYHA Sbjct: 21 VTGCAEQ-PKTLYQWGSYQPEVYEYFKNEGESKEAQVAKLEEDLQKIRAANATPPPGYHA 79 Query: 78 HLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKGATK 123 LGMLY + GKDDQ++Q L+TEK LFPES YMDFL+ N G K Sbjct: 80 QLGMLYGSLGKDDQMVQELRTEKTLFPESATYMDFLLKNAHAGVAK 125 >ref|YP_260797.1| putative lipoprotein [Pseudomonas fluorescens Pf-5] gb|AAY92961.1| putative lipoprotein [Pseudomonas fluorescens Pf-5] Length = 123 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 4/123 (3%) Query: 1 MMNKKLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEEN 60 MM + + AG LG L L+GC+ PKTLY W YQ Q Y +FK E EA++ ALE + Sbjct: 5 MMARPMMAGALLGCVL-LAGCSG--PKTLYQWETYQAQTYEYFKGE-EAREAQVEALERD 60 Query: 61 LQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 LQK+++ +AVPPGYHAHLGMLYA+ GKDDQ++Q TEKALFPES +YMDFL+ N +KG Sbjct: 61 LQKIKSTGKAVPPGYHAHLGMLYASLGKDDQMVQQFNTEKALFPESASYMDFLLKNAKKG 120 Query: 121 ATK 123 A + Sbjct: 121 AAQ 123 >ref|YP_003749559.1| lipoprotein [Ralstonia solanacearum PSI07] emb|CBJ34919.1| putative lipoprotein [Ralstonia solanacearum PSI07] Length = 122 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 72/125 (57%), Positives = 93/125 (74%), Gaps = 10/125 (8%) Query: 1 MMNK-----KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIA 55 MM+K ++AAG A+G AL L+GCA PK+LY W YQ Q+Y +FK E EA++A Sbjct: 1 MMSKLFAMSRVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFKGESK--EAQVA 55 Query: 56 ALEENLQKMRARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMN 115 LE L+K+++ + AVPPGYHAHLGMLY++ GKDDQ++Q QTEKALFPES AY+DFLM Sbjct: 56 ELERGLEKIKSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESGAYIDFLMK 115 Query: 116 NYRKG 120 N +KG Sbjct: 116 NVKKG 120 >emb|CCA80284.1| putative lipoprotein [blood disease bacterium R229] Length = 121 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 69/116 (59%), Positives = 89/116 (76%), Gaps = 5/116 (4%) Query: 5 KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKM 64 ++AAG A+G AL L+GCA PK+LY W YQ Q+Y +FK E EA++A LE L+K+ Sbjct: 9 RVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFKGESK--EAQVAELERGLEKI 63 Query: 65 RARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 ++ + AVPPGYHAHLGMLY++ GKDDQ++Q QTEKALFPES AY+DFLM N +KG Sbjct: 64 KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESGAYIDFLMKNVKKG 119 >ref|YP_003747943.1| lipoprotein [Ralstonia solanacearum CFBP2957] emb|CBJ53543.1| putative lipoprotein [Ralstonia solanacearum CFBP2957] Length = 121 Score = 140 bits (352), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 69/116 (59%), Positives = 89/116 (76%), Gaps = 5/116 (4%) Query: 5 KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKM 64 ++AAG A+G AL L+GCA PKTLY W Y+ Q+Y +FK G EA++A LE L+K+ Sbjct: 9 RVAAGVAVGSAL-LAGCAG--PKTLYQWEGYEPQVYQYFK--GESKEAQVAELERGLEKI 63 Query: 65 RARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 ++ + AVPPGYHAHLGMLY++ GKDDQ++Q QTEKALFPES AY+DFLM N +KG Sbjct: 64 KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESDAYIDFLMKNAKKG 119 >ref|ZP_00944361.1| Putative periplasmic protein [Ralstonia solanacearum UW551] ref|YP_002257506.1| lipoprotein [Ralstonia solanacearum IPO1609] gb|EAP73157.1| Putative periplasmic protein [Ralstonia solanacearum UW551] emb|CAQ36583.1| lipoprotein [Ralstonia solanacearum MolK2] emb|CAQ59392.1| lipoprotein [Ralstonia solanacearum IPO1609] gb|AEG71646.1| lipoprotein [Ralstonia solanacearum Po82] Length = 121 Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/116 (59%), Positives = 89/116 (76%), Gaps = 5/116 (4%) Query: 5 KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKM 64 ++AAG A+G AL L+GCA PKTLY W Y+ Q+Y +FK G EA++A LE L+K+ Sbjct: 9 RVAAGVAVGSAL-LAGCAG--PKTLYQWEGYEPQVYQYFK--GESKEAQVAELERGLEKI 63 Query: 65 RARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 ++ + AVPPGYHAHLGMLY++ GKDDQ++Q QTEKALFPES AY+DFLM N +KG Sbjct: 64 KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQTEKALFPESGAYIDFLMKNAKKG 119 >emb|CCA87838.1| putative lipoprotein [Ralstonia syzygii R24] Length = 121 Score = 137 bits (345), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 67/116 (57%), Positives = 87/116 (75%), Gaps = 5/116 (4%) Query: 5 KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKM 64 ++AAG A+G AL L+GCA PK+LY W YQ Q+Y +FK E EA++ LE L+K+ Sbjct: 9 RVAAGVAVGSAL-LAGCAG--PKSLYQWEGYQPQVYEYFKGESK--EAQVTELERGLEKI 63 Query: 65 RARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 ++ + AVPPGYHAHLGMLY++ GKDDQ++Q Q EKALFPES AY+DFLM N +KG Sbjct: 64 KSANGAVPPGYHAHLGMLYSSLGKDDQMVQEFQAEKALFPESGAYIDFLMKNVKKG 119 >gb|EGH20394.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020] Length = 123 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 3/108 (2%) Query: 16 LTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKMRARDEAVPPGY 75 + L+GC Q+PKTLY WG+YQ ++Y +FK G EA++A LEE+LQK+R+ + PPGY Sbjct: 19 VCLTGCV-QQPKTLYQWGSYQPEVYEYFK--GESKEAQVAKLEEDLQKIRSTNATPPPGY 75 Query: 76 HAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKGATK 123 HA LGMLY + GKDDQ++Q L+TEKALFPES YMDFL+ N G K Sbjct: 76 HAQLGMLYGSIGKDDQMVQELRTEKALFPESATYMDFLLKNAHAGVVK 123 >ref|NP_522235.1| lipoprotein [Ralstonia solanacearum GMI1000] emb|CAD17825.1| probable lipoprotein [Ralstonia solanacearum GMI1000] Length = 125 Score = 135 bits (340), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/116 (57%), Positives = 88/116 (75%), Gaps = 4/116 (3%) Query: 5 KLAAGFALGLALTLSGCASQKPKTLYGWGNYQDQLYSHFKNEGNGHEAEIAALEENLQKM 64 ++AAG A+G AL L+GCA+ PK+LY W YQ Q+Y +FK G EA++A LE L+K+ Sbjct: 12 RVAAGMAVGSAL-LAGCAA-GPKSLYQWEGYQPQVYEYFK--GESKEAQVAELERGLEKI 67 Query: 65 RARDEAVPPGYHAHLGMLYAAAGKDDQLIQALQTEKALFPESTAYMDFLMNNYRKG 120 ++ + AVPPGYHA LG+LY+ GKDDQ++Q QTEKALFPES AY+DFLM N +KG Sbjct: 68 KSANGAVPPGYHAQLGLLYSNLGKDDQMVQEFQTEKALFPESGAYIDFLMKNVKKG 123