BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0052.p (600 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776747.1| C4-dicarboxylate transport sensor kinase tra... 1217 0.0 ref|YP_004752903.1| transporter [Collimonas fungivorans Ter331] ... 729 0.0 ref|ZP_08272676.1| Transporter [Oxalobacteraceae bacterium IMCC9... 647 0.0 ref|YP_004845950.1| integral membrane sensor signal transduction... 399 e-109 ref|ZP_03697853.1| integral membrane sensor signal transduction ... 396 e-108 gb|AEG70650.1| c4-dicarboxylate transport sensor kinase protein ... 395 e-107 ref|YP_001856465.1| integral membrane sensor signal transduction... 392 e-106 ref|ZP_00946680.1| Transporter [Ralstonia solanacearum UW551] >g... 391 e-106 emb|CAQ18392.1| c4-dicarboxylate transport sensor kinase protein... 389 e-105 ref|YP_001894168.1| histidine kinase [Burkholderia phytofirmans ... 386 e-105 >ref|YP_003776747.1| C4-dicarboxylate transport sensor kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ64839.1| C4-dicarboxylate transport sensor kinase transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 600 Score = 1217 bits (3148), Expect = 0.0, Method: Compositional matrix adjust. Identities = 597/600 (99%), Positives = 600/600 (100%) Query: 1 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA 60 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA Sbjct: 1 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA 60 Query: 61 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD 120 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD Sbjct: 61 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD 120 Query: 121 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM 180 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM Sbjct: 121 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM 180 Query: 181 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA 240 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA Sbjct: 181 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA 240 Query: 241 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVAL 300 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLM+AL Sbjct: 241 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMLAL 300 Query: 301 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE 360 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE Sbjct: 301 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE 360 Query: 361 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL 420 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL Sbjct: 361 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL 420 Query: 421 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR 480 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR Sbjct: 421 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR 480 Query: 481 AAACVTGDVVRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 AAACVTGDVVRTEQVL+NLLRNALDAVEEAEHKRIAVVLEVAGG+ALVRIRDSGGGIADE Sbjct: 481 AAACVTGDVVRTEQVLVNLLRNALDAVEEAEHKRIAVVLEVAGGYALVRIRDSGGGIADE 540 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET 600 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET Sbjct: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKMET 600 >ref|YP_004752903.1| transporter [Collimonas fungivorans Ter331] gb|AEK62080.1| Transporter [Collimonas fungivorans Ter331] Length = 663 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/597 (64%), Positives = 459/597 (76%), Gaps = 7/597 (1%) Query: 1 MRARRNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEA 60 +RAR+ L+++ L V V TY +A RKA D QLQI ALDLES+LQK+E Sbjct: 70 LRARKPLVLIVLASVCAAGVVLTTYVVASRKASSDIGEASERQLQIIALDLESVLQKFET 129 Query: 61 LPFALGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDD 120 LPFALGFQ DV Q L PDD L + RLN+ + IQ+QS+ V+IFMLDR GLTLASSNWD Sbjct: 130 LPFALGFQTDVSQALARPDDKLNIQRLNQTLQLIQRQSKVVAIFMLDRNGLTLASSNWDS 189 Query: 121 EFSFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVM 180 + SF+GRDFGFRPYF EA++G GRFYGIGN ++ PGYFIAQPIY + +GVM Sbjct: 190 DTSFIGRDFGFRPYFKEAIKGNPGRFYGIGNTTNVPGYFIAQPIYASAAAHGENAVLGVM 249 Query: 181 VVKVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYA 240 VK+DL EFEHTWRSS DPITL D+ GVVFLSNRPEWKYHSL L+ +QQ L GTHQYA Sbjct: 250 AVKIDLTEFEHTWRSSEDPITLVDSSGVVFLSNRPEWKYHSLYPLNGAVQQDLTGTHQYA 309 Query: 241 DLPITPVSALPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVAL 300 D ITPVS+LP SGFG HV+R +G LGWQLMLFPSQAR+ R A+LWT+A ALL+ Sbjct: 310 DRTITPVSSLPNRESSGFGQHVTRGIGPLGWQLMLFPSQARIARIAILWTLAAALLLAIA 369 Query: 301 AISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTE 360 + L A YQ RRRLEER+ S A L++ IA+RT +L AN LEA+Y KLQ+TE Sbjct: 370 GLFLWALYQRRRRLEERLVS-------AEYLDRTIAQRTQELLVANHTLEAKYAKLQETE 422 Query: 361 SLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENL 420 LLR+TQN+L+QAGKLAMLGQMAAG+ HELNQPL AIRAFADNA+ FL RGQ+ +A ENL Sbjct: 423 HLLRSTQNKLIQAGKLAMLGQMAAGIAHELNQPLAAIRAFADNAMTFLTRGQADKATENL 482 Query: 421 EYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIR 480 +IS+AS MGKI+ QL GF+RKS EAVA +DLS++IEA++LLL +E Q GA++ I+IR Sbjct: 483 GHISNASGRMGKIVGQLNGFSRKSHEAVAAIDLSKSIEAAALLLHNEFQTHGASLQIEIR 542 Query: 481 AAACVTGDVVRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 AA V GD VRTEQVLINLLRNALDAV+ AE K +++VLE GG A++RIRDSG GI + Sbjct: 543 QAARVVGDSVRTEQVLINLLRNALDAVDNAEQKTVSLVLECEGGEAVIRIRDSGPGIPAQ 602 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLK 597 VA HLFEPFFTTK S KGLGLGLAISSSIVQAMNG+L+A+NH +GGAEFV+R+PLL+ Sbjct: 603 VALHLFEPFFTTKPSGKGLGLGLAISSSIVQAMNGRLTANNHSDGGAEFVLRIPLLE 659 >ref|ZP_08272676.1| Transporter [Oxalobacteraceae bacterium IMCC9480] gb|EGF33854.1| Transporter [Oxalobacteraceae bacterium IMCC9480] Length = 604 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/589 (57%), Positives = 430/589 (73%), Gaps = 3/589 (0%) Query: 10 LTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQA 69 L L + A+LL+ G+TY LA R A D Q QLQI ALDL+S+L+K+E LPFAL Sbjct: 14 LWLAVAASLLLVGLTYWLAARMARSDIDRQSERQLQIIALDLQSMLEKFETLPFALSVHP 73 Query: 70 DVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDF 129 D+ L P D V R+N+ +T+Q+Q++ +I+++D +GLT+A+SNW+D +++GR+F Sbjct: 74 DLTAALLQPADAATVARVNQTLQTVQRQARVAAIYLMDPQGLTIAASNWNDAQNYIGRNF 133 Query: 130 GFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEF 189 GFRPYF +A+ G AGRFYGIG+ +SEPGYFIAQP+ +G P+GV+ VK+ L EF Sbjct: 134 GFRPYFRDAIDGGAGRFYGIGSTTSEPGYFIAQPVLA---NGQGGKPLGVLAVKISLNEF 190 Query: 190 EHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA 249 E TW++S +PI L D GVVFL NRP W+YHSL + + + T QY ITP+++ Sbjct: 191 ERTWQTSDEPIVLADKDGVVFLGNRPAWQYHSLAPVDAAASEKIKATLQYVGKTITPIAS 250 Query: 250 LPPALQSGFGSHVSRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISLLAWYQ 309 LP A + G+ V+RPVGRLGWQL LF +Q+R+ RTA+LW+ A AL+M++ +SL A +Q Sbjct: 251 LPAASRKGYDQSVARPVGRLGWQLRLFSAQSRITRTALLWSGAVALVMLSAMLSLWARHQ 310 Query: 310 HRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLRTTQNE 369 RRRLEER ASR AL++AA EL+ +I RTG+L AN+ L +Y +L+ E LLRTTQ+E Sbjct: 311 RRRRLEERQASRQALQQAAEELDLQITLRTGELLQANRDLGDKYARLEHAEQLLRTTQDE 370 Query: 370 LVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYISSASAT 429 LVQAGKLAMLGQMAAGVTHELNQPL AIRAFADNAV FL RGQ AQA NL +IS+ASA Sbjct: 371 LVQAGKLAMLGQMAAGVTHELNQPLAAIRAFADNAVTFLERGQPAQASANLAHISAASAR 430 Query: 430 MGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIRAAACVTGDV 489 MG II QLKGFARKS +VA V+L+ ++ AS+LLL +E +LG + +DI +TGD Sbjct: 431 MGVIIGQLKGFARKSHGSVALVELTPSVHASALLLQAEFDRLGVVLQLDIAGPLQITGDA 490 Query: 490 VRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPF 549 VR EQVLINLLRNALDAVEEA + +A+ + G HAL+ +RDSG GI D+VA LF PF Sbjct: 491 VRLEQVLINLLRNALDAVEEAPQRHVALSVAREGDHALICVRDSGPGIPDDVAAQLFAPF 550 Query: 550 FTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLPLLKM 598 FTTK S KGLGLGLAISSSIVQAM GQLSAHN GGAEF +RLPL + Sbjct: 551 FTTKPSGKGLGLGLAISSSIVQAMRGQLSAHNLPGGGAEFQLRLPLFTV 599 >ref|YP_004845950.1| integral membrane sensor signal transduction histidine kinase [Pseudogulbenkiania sp. NH8B] dbj|BAK75536.1| integral membrane sensor signal transduction histidine kinase [Pseudogulbenkiania sp. NH8B] Length = 624 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 240/584 (41%), Positives = 334/584 (57%), Gaps = 22/584 (3%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y L LR Q+ A +L AL L+++L ++EALP+ L + ++L P D Sbjct: 39 YTLLLRGQLAAQRQANAQRLGAYALSLDNLLARHEALPYVLSLDGRLARLLAQPSDAALT 98 Query: 85 DRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGRAG 144 +N + +QQ++ F+LDR G TLASSNW S VG + +RPYF +A+ GR Sbjct: 99 AEVNHYLEGVQQRAGVAQAFLLDRSGRTLASSNWHSPLSLVGNSYAYRPYFQDAINGRPS 158 Query: 145 RFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITLTD 204 RFYGIG+ + EPG F+A P+ PIGV+VVKV L E W++S D + L D Sbjct: 159 RFYGIGSTTREPGVFLAAPLPSPTG------PIGVVVVKVKLDSIERAWQASGDHLALAD 212 Query: 205 AGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA------------LPP 252 GV+FL+ W+YH+L L P ++ L QY D P+ P++A LP Sbjct: 213 RDGVLFLATESAWQYHTLAPLPPAVRHRLHAERQYGDYPLPPLAADTALRGHGEQRRLP- 271 Query: 253 ALQSGFGSHV--SRPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISLLAWYQH 310 L +G + S P G LGW+++LF A +++A A + + W Q Sbjct: 272 -LGNGRRELLVQSHPAGLLGWRVLLFSELAEARQSAAGGAAALGFATAFVLALTVYWQQR 330 Query: 311 RRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLRTTQNEL 370 RRRL ER A++ LRR A LE RI ERT L AAN L R E+L++TES+LR T++ Sbjct: 331 RRRLAERRAAQAELRRVEAGLETRIVERTAALQAANNTLGQRVEELKRTESILRETRDSA 390 Query: 371 VQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYISSASATM 430 VQAGKLA+LGQMAAGVTHELNQPL A+ +DNAVK + + +A +NL I + + Sbjct: 391 VQAGKLAVLGQMAAGVTHELNQPLAALNTLSDNAVKLIELARYDEARDNLTLIGQLTGRL 450 Query: 431 GKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIRAAACVTGDVV 490 G+I+ QLK FAR++ A V ++QA+E + L++ ++L A I+ DI DVV Sbjct: 451 GRILGQLKSFARQAPADTAAVHVAQAVEHACLIVEPRRRELDAVIATDIAPELQAWADVV 510 Query: 491 RTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFF 550 R EQVL+NLLRN LDA+ R+ + G + +RD G G+ E LFEPF+ Sbjct: 511 RLEQVLVNLLRNGLDAMAGQAAPRLELHAVRHGTRLRLTVRDHGPGLPAEALERLFEPFY 570 Query: 551 TTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLP 594 TTK + +GLGLGLAIS +IV++ G L+A N + GA F + LP Sbjct: 571 TTKPAGQGLGLGLAISLAIVESFGGTLTAGNADGAGAVFRLDLP 614 >ref|ZP_03697853.1| integral membrane sensor signal transduction histidine kinase [Lutiella nitroferrum 2002] gb|EEG09415.1| integral membrane sensor signal transduction histidine kinase [Lutiella nitroferrum 2002] Length = 624 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 241/585 (41%), Positives = 332/585 (56%), Gaps = 24/585 (4%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y L LR Q+ A +L AL L+++L ++EALP+ L + ++L P D Sbjct: 39 YTLLLRGQLAAQRQANAQRLGAYALSLDNLLARHEALPYVLSLDGRLARLLAQPSDAALT 98 Query: 85 DRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGRAG 144 +N + +QQ++ F+LDR G TLASSNW S VG + +RPYF A+ GR Sbjct: 99 AEVNHYLEGVQQRAGVAQAFLLDRSGRTLASSNWHSPLSLVGNSYAYRPYFQGAINGRPS 158 Query: 145 RFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITLTD 204 RFYGIG+ + EPG F+A P+ PIGV+VVKV L E W++S D + L D Sbjct: 159 RFYGIGSTTREPGVFLAAPLPSPTG------PIGVVVVKVKLDSIERAWQASGDHLALAD 212 Query: 205 AGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSALPPALQSGFGSHV-- 262 GV+FL+ W+YH+L L P ++ L QY D P+ P++A AL+ G G Sbjct: 213 RDGVLFLATESAWQYHTLAPLPPAVRHRLHAERQYGDYPLPPLAA-DTALR-GHGEQRRL 270 Query: 263 ------------SRPVGRLGWQLMLFPSQARM-QRTAMLWTMACALLMVALAISLLAWYQ 309 S P G LGW+++LF A Q A LA+++ W Q Sbjct: 271 PLGNARRELLVQSHPAGLLGWRVLLFSELAEARQNAAGGAAALGFATAFVLALTVY-WQQ 329 Query: 310 HRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLRTTQNE 369 RRRL ER A++ LRR A LE RI ERT L AAN L R ++L++TES+LR T++ Sbjct: 330 RRRRLAERRAAQAELRRVEAGLEARIVERTAALQAANTTLGQRVDELKRTESILRETRDS 389 Query: 370 LVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYISSASAT 429 VQAGKLA+LGQMAAGVTHELNQPL A+ +DNAVK + + +A +NL I + Sbjct: 390 AVQAGKLAVLGQMAAGVTHELNQPLAALNTLSDNAVKLIELARYDEARDNLTLIGQLTGR 449 Query: 430 MGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISIDIRAAACVTGDV 489 +G+I+ QLK FAR++ A V ++QA+E + L++ ++L A I+ DI DV Sbjct: 450 LGRILGQLKSFARQAPADTAAVHVAQAVEHACLIVEPRRRELDAVIATDIAPELQAWADV 509 Query: 490 VRTEQVLINLLRNALDAVEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPF 549 VR EQVL+NLLRN LDA+ R+ + G + +RD G G+ E LFEPF Sbjct: 510 VRLEQVLVNLLRNGLDAMAGQAAPRLELHAVRHGTRLRLTVRDHGPGLPAEALERLFEPF 569 Query: 550 FTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEEGGAEFVVRLP 594 +TTK + +GLGLGLAIS +IV++ G L+A N + GA F + LP Sbjct: 570 YTTKPAGQGLGLGLAISLAIVESFGGTLTAGNADGAGAVFRLDLP 614 >gb|AEG70650.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum Po82] Length = 635 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 236/595 (39%), Positives = 339/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPHHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADLAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANAALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ S ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDSRRRQAGVPVAVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V PHLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLPHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >ref|YP_001856465.1| integral membrane sensor signal transduction histidine kinase [Burkholderia phymatum STM815] gb|ACC69419.1| integral membrane sensor signal transduction histidine kinase [Burkholderia phymatum STM815] Length = 683 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/622 (38%), Positives = 347/622 (55%), Gaps = 44/622 (7%) Query: 5 RNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFA 64 R LLIL + + CG+T+ + + + A + L+S L++YE+LP+ Sbjct: 55 RRLLILFALVAGLVAACGLTWTITWQHGIDTLRRNAAVRADRTTATLKSTLERYESLPYL 114 Query: 65 LGFQADVRQVL--QHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEF 122 LG V+ VL PD+V R N+ + ++++A +++ G +A+SNWD Sbjct: 115 LGEHPLVQDVLVDPKPDNVA---RANQYLTDLNRRARANVAYLVTAAGRCVAASNWDQPD 171 Query: 123 SFVGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVV 182 SF+G+ + FRPYF EAV+G+ GRF+GIG S +PGY+I+QP+ R +G + +GV VV Sbjct: 172 SFIGQAYLFRPYFVEAVKGKVGRFFGIGTTSLDPGYYISQPVRR-----DGKI-VGVAVV 225 Query: 183 KVDLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADL 242 K++L F+ +++P+ +TD GV+FLS+ P WKYH+++ L+ + ++ T QYA Sbjct: 226 KLNLEWFQGA--DASEPMIVTDDHGVIFLSSVPAWKYHTVKPLTSDVIASIYDTRQYARQ 283 Query: 243 PITPVS-ALPPALQSG----------FGSHVS-------RPVGRLGWQLMLFPSQARMQR 284 PI P+ ++ L+ G G++ + R +G W+L+ + Sbjct: 284 PIAPLPMSVVRTLEGGAQIVRIGGGRTGNYAAPRFLASQRTLGEPDWRLITLAPVDPVNA 343 Query: 285 TAMLWTMACALLMVALAISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTA 344 A T+ V+L + L W R R+ E M SR L++A AEL QR+AERT L+ Sbjct: 344 DARYATIVTGFGYVSLCLLLFYWRMRRARVREVMRSRALLQKAYAELNQRVAERTADLSQ 403 Query: 345 ANQALEARYEKLQQTESLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNA 404 AN+ L + + E LR +EL+QA KLA LGQMAAG+THELNQPL A+R F+DN Sbjct: 404 ANEQLTKEVSERTRAEQELRDAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNT 463 Query: 405 VKFLARGQSAQAVENLEYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLL 464 FL RG A ENLE I++ + MGKI QLK F ++ AC +++A+ LL Sbjct: 464 RVFLERGDQESAKENLEAIAALTERMGKITNQLKLFVGRARPRNACAGVARALRNVLTLL 523 Query: 465 ASECQKLGATISIDIRAAA-------------CVTGDVVRTEQVLINLLRNALDAVEEAE 511 Q + +S+ A+ V D +R EQVLINLL NALDAV Sbjct: 524 QKRLQGVTVDVSLSDEGASPVRFNLDIDDPKLVVHCDDLRLEQVLINLLGNALDAVAATP 583 Query: 512 HKRIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFFTTKSSSKGLGLGLAISSSIVQ 571 RIA+ ++ + + + D+G GI DEV P LFEPFFTTK +GLGLGLAI SSI + Sbjct: 584 SPRIAIGVQTSPDVLTLTVSDNGPGIPDEVLPRLFEPFFTTKEMGQGLGLGLAICSSIAR 643 Query: 572 AMNGQLSAHNHEEGGAEFVVRL 593 G L+A N+ +GGAEFV+ L Sbjct: 644 DCGGSLAARNNAQGGAEFVLTL 665 >ref|ZP_00946680.1| Transporter [Ralstonia solanacearum UW551] ref|YP_002256927.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum IPO1609] gb|EAP70825.1| Transporter [Ralstonia solanacearum UW551] emb|CAQ58808.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum IPO1609] Length = 635 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 338/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPHHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADRAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANAALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ + ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDTRRRQAGVPVTVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLSHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >emb|CAQ18392.1| c4-dicarboxylate transport sensor kinase protein [Ralstonia solanacearum MolK2] Length = 635 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 234/595 (39%), Positives = 338/595 (56%), Gaps = 32/595 (5%) Query: 25 YRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFALGFQADVRQVLQHPDDVLAV 84 Y LAL+ + + + A +L L +YE+LP + + L P AV Sbjct: 39 YALALQHYVAARAEEAGRRTTFYAQNLRGTLARYESLPRLAALEHVLHVALTAPYHRDAV 98 Query: 85 DR--LNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSFVGRDFGFRPYFSEAVQGR 142 R N K +Q + +++++D G TLA+SNWD SF+GR++ FRPYF +A++ Sbjct: 99 LRGAANAYLKEVQIAADLTAVYLMDATGQTLAASNWDQPSSFIGRNYAFRPYFVDAMREG 158 Query: 143 AGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKVDLAEFEHTWRSSADPITL 202 GRFYG+GN + E GYF+A P+ EG+ PIG + VK++L FE T S D + L Sbjct: 159 LGRFYGVGNTTGETGYFLAAPVR------EGNQPIGAVAVKINLDSFEATLARSGDTVLL 212 Query: 203 TDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPITPVSA-----------LP 251 D GV+FLS+ PEWKY +L L+ AL T QY + P+ P Sbjct: 213 VDRHGVIFLSSVPEWKYRTLGTLNAAQHVALDATRQYVPHTLAPLDVRAGGVPFSADHAP 272 Query: 252 PALQSGF-GSHVS------RPVGRLGWQLMLFPSQARMQRTAMLWTMACALLMVALAISL 304 L+ G VS RP+G LGWQ+ + QRTA++ + A M L Sbjct: 273 QTLRVALPGRSVSTLRVQYRPIGLLGWQVAVLIDPRAEQRTALVAGASAAFAMALAFAVL 332 Query: 305 LAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQALEARYEKLQQTESLLR 364 +A RR EE+ ++R ALR +LE RIA+RT +LT+AN AL ++ E L T+ +LR Sbjct: 333 VALGLRARRHEEQRSARAALREVQRDLEARIAQRTVELTSANVALASKVEALDATQRILR 392 Query: 365 TTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKFLARGQSAQAVENLEYIS 424 T++ VQAGKLA+LGQMAAG+THELNQPLTA+ +DNA + RG+ + NL +I Sbjct: 393 ETRDAAVQAGKLAVLGQMAAGITHELNQPLTALTTLSDNANQLAERGRIDEVRGNLAHIG 452 Query: 425 SASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASECQKLGATISID-IRAAA 483 + MG+I++ +KGFARK A A V + +AI + +L+ + ++ G +++ + Sbjct: 453 QLAHRMGRIVSHIKGFARKGDAARAAVPVEEAIRQALMLVDTRRRQAGVPVTVGLVPPGV 512 Query: 484 CVTGDVVRTEQVLINLLRNALDA---VEEAEHKRIAVVLEVAGGHALVRIRDSGGGIADE 540 V + VR EQVL+NL+RNA+DA V + E + V ++V + +RD+G GIA + Sbjct: 513 AVWANAVRLEQVLVNLIRNAIDATAEVPQPEAAGVRVTVDVGDALVCITVRDAGPGIAPQ 572 Query: 541 VAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAMNGQLSAHNHEE--GGAEFVVRL 593 V HLFEPFFTTK+ +GLGLGLAIS +IV+ G+L N ++ GGA FV+ L Sbjct: 573 VLQHLFEPFFTTKADGQGLGLGLAISLAIVEDFGGRLEGRNADDGAGGAAFVIEL 627 >ref|YP_001894168.1| histidine kinase [Burkholderia phytofirmans PsJN] gb|ACD14944.1| histidine kinase [Burkholderia phytofirmans PsJN] Length = 666 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 239/627 (38%), Positives = 339/627 (54%), Gaps = 43/627 (6%) Query: 5 RNLLILTLFLVATLLVCGITYRLALRKAEVDQKTQGAAQLQIAALDLESILQKYEALPFA 64 R LLIL + ++ CG+TY LA + + A ++ L+S L++YE+LP+ Sbjct: 41 RRLLILFALVAGLVVACGLTYSLAWQSGIDHLRRNAAVRVDRTTSALKSTLERYESLPYL 100 Query: 65 LGFQADVRQVLQHPDDVLAVDRLNRAFKTIQQQSQAVSIFMLDRRGLTLASSNWDDEFSF 124 L V+ L P V R N + + ++A +++ G +A+SNW SF Sbjct: 101 LAEHPIVQDALVDPTPA-NVQRANLYLDDLNRHARATVTYIIPLDGFCVAASNWRGPGSF 159 Query: 125 VGRDFGFRPYFSEAVQGRAGRFYGIGNISSEPGYFIAQPIYRRQDQAEGDLPIGVMVVKV 184 +G + FRPYF +AV+G GRF+GIG IS PGY+I+QP+ R EG + +GV VVK+ Sbjct: 160 IGAGYLFRPYFVDAVKGGVGRFFGIGTISQAPGYYISQPVRR-----EGKI-VGVAVVKL 213 Query: 185 DLAEFEHTWRSSADPITLTDAGGVVFLSNRPEWKYHSLQALSPPMQQALAGTHQYADLPI 244 DL F+ +++P+ +TD GV+FLS+ P WKYH+++ LS P+ ++ QYA PI Sbjct: 214 DLEWFQGV--DASEPLVVTDDHGVIFLSSVPAWKYHTIRPLSGPVADSIYQARQYAQQPI 271 Query: 245 TPVSALPPALQS-----------GFGSHVSR------PVGRLGWQLMLFPSQARMQRTAM 287 P LP +++ G G + R +G W L+ + A Sbjct: 272 AP---LPVSIERTLEGNAQIVRIGGGRYAPRYLASRRGMGEPDWHLITMSPVDPVDADAR 328 Query: 288 LWTMACALLMVALAISLLAWYQHRRRLEERMASRDALRRAAAELEQRIAERTGQLTAANQ 347 T+ A V+L + W R R+ E M SR L++A AEL +R+AERT L+ AN+ Sbjct: 329 KATIVTAFGYVSLVLLAFYWRMRRARVREVMRSRALLQKAYAELNRRVAERTADLSQANE 388 Query: 348 ALEARYEKLQQTESLLRTTQNELVQAGKLAMLGQMAAGVTHELNQPLTAIRAFADNAVKF 407 L+ + + E LR +EL+QA KLA LGQMAAG+THELNQPL A+R F+DN Sbjct: 389 QLQKEVAERTRAEQELRAAHDELIQASKLAALGQMAAGITHELNQPLAALRGFSDNTRVL 448 Query: 408 LARGQSAQAVENLEYISSASATMGKIIAQLKGFARKSGEAVACVDLSQAIEASSLLLASE 467 L RG A A ENLE I++ + MGKI QLK F ++ A + +A+ LL Sbjct: 449 LERGDQASARENLEAIAALTERMGKITNQLKLFVGRARPRNARAPIVRALRNVVALLQKR 508 Query: 468 CQKLGATISI--------------DIRAAACVTGDVVRTEQVLINLLRNALDAVEEAEHK 513 Q + I++ D D +R EQVLINLL NALDA + Sbjct: 509 LQGVEVDITLLDADSGTRTPLSLADDHPELVAHCDDLRLEQVLINLLGNALDATADLHPP 568 Query: 514 RIAVVLEVAGGHALVRIRDSGGGIADEVAPHLFEPFFTTKSSSKGLGLGLAISSSIVQAM 573 RI++ +EVA + + D+G GIAD+V P LFEPFFTTK +GLGLGLAISSSI + Sbjct: 569 RISIEIEVADANLSFVVSDNGPGIADDVLPRLFEPFFTTKEMGQGLGLGLAISSSIARDC 628 Query: 574 NGQLSAHNHEEGGAEFVVRLPLLKMET 600 G L A N +GGA FV+ L +++T Sbjct: 629 GGSLVARNAPDGGALFVLTLRRARVQT 655