BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0042.p (282 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776756.1| glycine rich transmembrane protein [Herbaspi... 470 e-130 emb|CBJ39009.1| conserved exported protein of unknown function, ... 233 3e-59 ref|ZP_08272826.1| Beta-propeller domains of methanol dehydrogen... 233 4e-59 ref|YP_004754348.1| hypothetical protein CFU_3701 [Collimonas fu... 232 5e-59 ref|ZP_04577895.1| conserved hypothetical protein [Oxalobacter f... 231 1e-58 ref|YP_001352293.1| hypothetical protein mma_0603 [Janthinobacte... 228 8e-58 ref|YP_003753316.1| hypothetical protein RPSI07_2687 [Ralstonia ... 227 1e-57 ref|NP_518784.1| glycine rich transmembrane protein [Ralstonia s... 227 2e-57 emb|CCA89040.1| conserved exported hypothetical protein, DUF477 ... 226 4e-57 emb|CCA81045.1| putative glycine rich membrane protein [blood di... 224 9e-57 >ref|YP_003776756.1| glycine rich transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64848.1| glycine rich transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 283 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 240/246 (97%), Positives = 241/246 (97%), Gaps = 3/246 (1%) Query: 3 MRKLLLSCWL---LALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQ 59 MRKLLLSCWL LALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQ Sbjct: 1 MRKLLLSCWLLAWLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQ 60 Query: 60 RTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEA 119 RTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEA Sbjct: 61 RTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEA 120 Query: 120 GRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQASTA 179 GRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQASTA Sbjct: 121 GRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQASTA 180 Query: 180 QTSDGGGWITLLVVGLFLVVFFSVLLKSRRGSRNNLNDNDWGHGRSTTAGVIIGSILDEA 239 Q SDGGGWITLLV+GLFLVVFFSVLLKSRRGSRNNLNDNDWG GRSTTAGVIIGSILDEA Sbjct: 181 QPSDGGGWITLLVIGLFLVVFFSVLLKSRRGSRNNLNDNDWGRGRSTTAGVIIGSILDEA 240 Query: 240 ARQASS 245 ARQASS Sbjct: 241 ARQASS 246 >emb|CBJ39009.1| conserved exported protein of unknown function, DUF477 [Ralstonia solanacearum CMR15] Length = 257 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 131/240 (54%), Positives = 165/240 (68%), Gaps = 20/240 (8%) Query: 1 LAMRKLLLSCWLLAL---AGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 L MR LL S +AL A PA A L VPPL+ V DQ L AQQR ALE VL + Sbjct: 3 LRMRALLASLVTMALWLAAWPAHAQADLAAVPPLTARVTDQTGTLTAQQRGALEQVLADY 62 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 EQ+ GSQI VL+++STAPE IE Y IRVA+AWK GRKG+DDG I+++AKDNP SLR++RI Sbjct: 63 EQQRGSQIFVLMVASTAPEPIEAYGIRVAEAWKAGRKGVDDGAIVLIAKDNPASLRKMRI 122 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 E GRG++GSLTDAQSKRIL+DV+APHFRQ DFYGGL+AG++AI T++ QE LPP++R Sbjct: 123 EVGRGLEGSLTDAQSKRILQDVMAPHFRQGDFYGGLSAGISAIQTVIAQENLPPAER--G 180 Query: 178 TAQTSDG--GGWITLLVVGLFLVVFF--SVLLKS----------RRGSRNNLNDNDWGHG 223 AQ +D G W+ +L L ++VFF S ++S R GSR + + WG G Sbjct: 181 RAQHTDAGIGTWLPVL-FPLAIIVFFVLSAAMRSGGRVAGSLPGRPGSRVMMGNRGWGPG 239 >ref|ZP_08272826.1| Beta-propeller domains of methanol dehydrogenase type [Oxalobacteraceae bacterium IMCC9480] gb|EGF33696.1| Beta-propeller domains of methanol dehydrogenase type [Oxalobacteraceae bacterium IMCC9480] Length = 265 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 142/238 (59%), Positives = 168/238 (70%), Gaps = 14/238 (5%) Query: 1 LAMRKLLLSCWL---LALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 + + + +L+ L L+LAG LV VPPL+GHVIDQ +LQA Q ALE LT+ Sbjct: 1 MTLTRFVLAILLTGSLSLAGA----QALVAVPPLTGHVIDQAAMLQAPQLAALEATLTQY 56 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 E RTGSQIGVLL+ STAPE IEQYSIRVADAWKLGR G+DDGVIL+VAKDNPK RLRI Sbjct: 57 EARTGSQIGVLLVPSTAPETIEQYSIRVADAWKLGRTGVDDGVILLVAKDNPKGSGRLRI 116 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 EAGRGVQGSLTD QSKRIL++VIAP+F++NDF GGLAAG TAI +LL++E+LP + Q Sbjct: 117 EAGRGVQGSLTDLQSKRILQEVIAPYFQRNDFNGGLAAGTTAIMSLLDKEQLPAAPAQ-- 174 Query: 178 TAQTSDGG-GWITLLVVGLFLVVFFSVLLKSRRGSRNNLNDNDWGHGRSTTAGVIIGS 234 TA D G LL + LF V + L R RN L DWG+ TAGVI+GS Sbjct: 175 TASPRDAGVSLAALLPLLLFGAVMLAGALTRGRRGRNRLGQGDWGN----TAGVILGS 228 >ref|YP_004754348.1| hypothetical protein CFU_3701 [Collimonas fungivorans Ter331] gb|AEK63525.1| conserved hypothetical protein, putative glycine rich transmembrane protein [Collimonas fungivorans Ter331] Length = 288 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 121/218 (55%), Positives = 153/218 (70%), Gaps = 10/218 (4%) Query: 26 VPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQRTGSQIGVLLMSSTAPEAIEQYSIRV 85 V VPPL HV D +LQ QR AL+ L+E E RTGSQI VLL+S T PE IE Y++RV Sbjct: 36 VAVPPLQAHVTDLAGMLQPAQRDALDNTLSEYEARTGSQIAVLLLSKTEPEGIEDYAVRV 95 Query: 86 ADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEAGRGVQGSLTDAQSKRILEDVIAPHFR 145 ADAWKLGRKGIDDGVIL+VAKDNPK+LRR+ I GRGVQG+LTDAQSKR+L+++IAP+F Sbjct: 96 ADAWKLGRKGIDDGVILLVAKDNPKALRRMMILTGRGVQGTLTDAQSKRVLQEIIAPYFS 155 Query: 146 QNDFYGGLAAGVTAITTLLEQEKLPPSKRQASTAQTSDGGGWITLLVVGLF--LVVFFSV 203 + DFYGGL AG++AI LL+QE P R++ AQ W+ L LF ++ ++ Sbjct: 156 KGDFYGGLTAGISAIMPLLDQENFAPPSRKSGPAQ-EPSSDWLGALAPLLFFGFIILITI 214 Query: 204 LLKSRR---GSRNNLNDNDWGHGRSTTAGVIIGSILDE 238 + ++R GS +LN N WG+ AGVIIGSIL + Sbjct: 215 ISRARSGGAGSGRSLNSNVWGNA----AGVIIGSILSQ 248 >ref|ZP_04577895.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] gb|EEO28857.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS] Length = 265 Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/238 (51%), Positives = 159/238 (66%), Gaps = 13/238 (5%) Query: 4 RKLLLSCWLLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQRTGS 63 R L++C L L A + + PVP L+ HV D+++LL QRQ+LE L + E RTG+ Sbjct: 10 RHFLVACLFLFLLMEGHAQN-IKPVPELNAHVSDEINLLSPSQRQSLENYLADYENRTGN 68 Query: 64 QIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEAGRGV 123 QI VLL +TAPE IEQYSIRVAD WKLGR+G+DDGV+LIVAK+NP LRRLRIEAGRGV Sbjct: 69 QIAVLLTDNTAPETIEQYSIRVADEWKLGRQGVDDGVLLIVAKNNPPGLRRLRIEAGRGV 128 Query: 124 QGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQASTAQTSD 183 QG LTD +SK+IL+DVIAP+FRQN+FY GL AG+TAIT+ L++E P + ++ Q Sbjct: 129 QGVLTDMRSKQILQDVIAPYFRQNNFYKGLTAGITAITSTLDKETFPENTQE---KQEEK 185 Query: 184 GGGWITLLVVGLFLVVFFSVLLKSRRGSRNNLNDNDWGHGRSTTAGVIIGSILDEAAR 241 W L++ LF V+ VL++SR R HG +G+I+G L + R Sbjct: 186 AASWSPFLILILFFVI---VLIRSRSARRFG------KHGHWGASGIILGGGLHDRFR 234 >ref|YP_001352293.1| hypothetical protein mma_0603 [Janthinobacterium sp. Marseille] gb|ABR90641.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 274 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 130/239 (54%), Positives = 168/239 (70%), Gaps = 12/239 (5%) Query: 1 LAMRKLLLSCWLLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEIEQR 60 + + + LL+C L A A + LVPVPPL V D +L A+QR LE VL E E R Sbjct: 1 MKILRTLLACTLALFCVLAGAQN-LVPVPPLKERVTDLAGMLNAEQRTTLENVLAEYETR 59 Query: 61 TGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRIEAG 120 TG+QI +LL+ ST PE IEQYSIRVADAWKLGRKG+DDGV+L+VAKDN + RLRIE G Sbjct: 60 TGNQIAILLLKSTEPEGIEQYSIRVADAWKLGRKGVDDGVLLLVAKDNSAASGRLRIETG 119 Query: 121 RGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLP-PSKRQASTA 179 RGVQG LTDAQSKR+L+DVIAPHFRQ DFYGGLA+GV+ IT+LL++E P P+KR ++A Sbjct: 120 RGVQGVLTDAQSKRVLQDVIAPHFRQGDFYGGLASGVSVITSLLDKEAFPEPAKRGQASA 179 Query: 180 QTSDGGGWITLLVVGLFLVVFFSVLLKSR--RGSRNNLNDNDWGHGRSTTAGVIIGSIL 236 Q D W + ++ F +L +SR RG+R + ++ DWG+ +AGVI+G+ + Sbjct: 180 Q-DDAFTWGPFIFFA---ILIFIMLARSRGGRGARAHSSNGDWGN----SAGVILGTAI 230 >ref|YP_003753316.1| hypothetical protein RPSI07_2687 [Ralstonia solanacearum PSI07] emb|CBJ52053.1| conserved exported protein of unknown function, DUF477 [Ralstonia solanacearum PSI07] Length = 280 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 122/215 (56%), Positives = 153/215 (71%), Gaps = 7/215 (3%) Query: 3 MRKLLLSC-----WLLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 MR LL S WL A A PA A LV VPPL+ V D L AQQR ALE VL + Sbjct: 5 MRALLASLVTMVLWLAA-AWPAHAQTDLVAVPPLAARVTDLTGTLTAQQRGALEQVLADY 63 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 EQ+ GSQI VL++++TAPE IE Y IRVA+AWK GRKG+DDG I+++AKDNP SLR++RI Sbjct: 64 EQQRGSQIFVLMVAATAPEPIEAYGIRVAEAWKAGRKGVDDGAIVLIAKDNPASLRKMRI 123 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 E GRG++GSLTDAQSKRIL+DV+APHFRQ DFYGGL+AG++AI T++ QE LPP++R + Sbjct: 124 EVGRGLEGSLTDAQSKRILQDVMAPHFRQGDFYGGLSAGISAIQTVIAQENLPPAERGRA 183 Query: 178 TAQTSDGGGWITLLVVGLFLVVFFSVLLKSRRGSR 212 S G W+ +L L ++VFF + R G R Sbjct: 184 QRTESGIGTWLPVL-FPLAIIVFFVLSAAMRSGGR 217 >ref|NP_518784.1| glycine rich transmembrane protein [Ralstonia solanacearum GMI1000] emb|CAD14193.1| putative of unknown function duf477; transmembrane protein [Ralstonia solanacearum GMI1000] Length = 279 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/215 (56%), Positives = 153/215 (71%), Gaps = 4/215 (1%) Query: 1 LAMRKLLLSCWLLAL---AGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 L MR LL S +AL A PA A L +PPL+ V D L AQQR ALE VL + Sbjct: 3 LRMRALLTSLVTMALWLAAWPAHAQADLAAIPPLAARVTDLTGTLTAQQRGALEQVLADY 62 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 EQ+ GSQI VL+++STAPE IE Y IRVA+AWK GRKG+DDG I+++AKDNP SLR++RI Sbjct: 63 EQQRGSQIFVLMVASTAPEPIEAYGIRVAEAWKAGRKGVDDGAIVLIAKDNPASLRKMRI 122 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 E GRG++GSLTDAQSKRIL+DV+APHFRQ DFYGGL+AG++AI T++ QE LPP++R + Sbjct: 123 EVGRGLEGSLTDAQSKRILQDVMAPHFRQGDFYGGLSAGISAIQTVIAQENLPPAERGRA 182 Query: 178 TAQTSDGGGWITLLVVGLFLVVFFSVLLKSRRGSR 212 S G W+ +L L ++VFF + R G R Sbjct: 183 RRTDSGIGTWLPVL-FPLAIIVFFVLSAAMRSGGR 216 >emb|CCA89040.1| conserved exported hypothetical protein, DUF477 [Ralstonia syzygii R24] Length = 281 Score = 226 bits (575), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 121/215 (56%), Positives = 153/215 (71%), Gaps = 7/215 (3%) Query: 3 MRKLLLSC-----WLLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 MR LL S WL A A PA A LV VPPL+ V D L AQQR ALE VL + Sbjct: 5 MRALLASLVTMVLWLAA-AWPAHAQTELVAVPPLAARVTDLTGTLTAQQRGALEQVLADY 63 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 EQ+ G+QI VL++++TAPE IE Y IRVA+AWK GRKG+DDG I+++AKDNP SLR++RI Sbjct: 64 EQQRGNQIFVLMVAATAPEPIEAYGIRVAEAWKAGRKGVDDGAIVLIAKDNPASLRKMRI 123 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 E GRG++GSLTDAQSKRIL+DV+APHFRQ DFYGGL+AG++AI T++ QE LPP++R + Sbjct: 124 EVGRGLEGSLTDAQSKRILQDVMAPHFRQGDFYGGLSAGISAIQTVIAQENLPPAERGRA 183 Query: 178 TAQTSDGGGWITLLVVGLFLVVFFSVLLKSRRGSR 212 S G W+ +L L ++VFF + R G R Sbjct: 184 QRTESGIGTWLPVL-FPLAIIVFFVLSAAMRSGGR 217 >emb|CCA81045.1| putative glycine rich membrane protein [blood disease bacterium R229] Length = 279 Score = 224 bits (572), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 121/215 (56%), Positives = 152/215 (70%), Gaps = 7/215 (3%) Query: 3 MRKLLLSC-----WLLALAGPARADDGLVPVPPLSGHVIDQVHLLQAQQRQALEGVLTEI 57 MR LL S WL A A PA A LV VPPL+ V D L AQQR ALE V + Sbjct: 5 MRALLASLVTMVLWLAA-AWPAHAQTDLVAVPPLAARVTDLTGTLTAQQRGALEQVPADY 63 Query: 58 EQRTGSQIGVLLMSSTAPEAIEQYSIRVADAWKLGRKGIDDGVILIVAKDNPKSLRRLRI 117 EQ+ GSQI VL++++TAPE IE Y IRVA+AWK GRKG+DDG I+++AKDNP SLR++RI Sbjct: 64 EQQRGSQIFVLMVAATAPEPIEAYGIRVAEAWKAGRKGVDDGAIVLIAKDNPASLRKMRI 123 Query: 118 EAGRGVQGSLTDAQSKRILEDVIAPHFRQNDFYGGLAAGVTAITTLLEQEKLPPSKRQAS 177 E GRG++GSLTDAQSKRIL+DV+APHFRQ DFYGGL+AG++AI T++ QE LPP++R + Sbjct: 124 EVGRGLEGSLTDAQSKRILQDVMAPHFRQGDFYGGLSAGISAIQTVIAQENLPPAERGRA 183 Query: 178 TAQTSDGGGWITLLVVGLFLVVFFSVLLKSRRGSR 212 S G W+ +L L ++VFF + R G R Sbjct: 184 QRTESGIGTWLPVL-FPLAIIVFFVLSAAMRSGGR 217