BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0037.p (455 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776758.1| D-alanyl-D-alanine carboxipeptidase 3 (S13) ... 918 0.0 ref|YP_004754350.1| D-alanyl-D-alanine carboxypeptidase [Collimo... 588 e-166 ref|YP_001352290.1| D-alanyl-D-alanine carboxypeptidase [Janthin... 557 e-156 ref|YP_001098959.1| putative D-alanyl-D-alanine carboxypeptidase... 525 e-147 ref|ZP_08275199.1| D-alanyl-D-alanine carboxypeptidase [Oxalobac... 503 e-140 ref|ZP_04579982.1| D-alanyl-D-alanine carboxypeptidase [Oxalobac... 435 e-120 ref|ZP_04577832.1| D-alanyl-D-alanine carboxypeptidase [Oxalobac... 422 e-116 ref|YP_003168616.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl... 388 e-105 ref|YP_003848399.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl... 387 e-105 ref|ZP_08506702.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-... 380 e-103 >ref|YP_003776758.1| D-alanyl-D-alanine carboxipeptidase 3 (S13) family signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ64850.1| D-alanyl-D-alanine carboxipeptidase 3 (S13) family signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 484 Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust. Identities = 451/455 (99%), Positives = 451/455 (99%) Query: 1 MGHAAAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVT 60 MGHAAAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNI QPFNPASVMKLVT Sbjct: 30 MGHAAAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIGQPFNPASVMKLVT 89 Query: 61 TDAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGI 120 TDAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGI Sbjct: 90 TDAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGI 149 Query: 121 QDIRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVS 180 QDIRG LVLDRSYFA SSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVS Sbjct: 150 QDIRGNLVLDRSYFAPSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVS 209 Query: 181 VSMDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRM 240 VSMDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRM Sbjct: 210 VSMDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRM 269 Query: 241 SNVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVM 300 SNVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVM Sbjct: 270 SNVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVM 329 Query: 301 ARQVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLA 360 ARQVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLA Sbjct: 330 ARQVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLA 389 Query: 361 NVLLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQA 420 NVLLQ WRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQA Sbjct: 390 NVLLQAWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQA 449 Query: 421 ASGKTYVVVFLINHPAAPNGQKAQDALLQWVYENG 455 ASGKTYVVVFLINHPAAPNGQKAQDALLQWVYENG Sbjct: 450 ASGKTYVVVFLINHPAAPNGQKAQDALLQWVYENG 484 >ref|YP_004754350.1| D-alanyl-D-alanine carboxypeptidase [Collimonas fungivorans Ter331] gb|AEK63527.1| D-alanyl-D-alanine carboxypeptidase [Collimonas fungivorans Ter331] Length = 509 Score = 588 bits (1516), Expect = e-166, Method: Compositional matrix adjust. Identities = 284/453 (62%), Positives = 343/453 (75%), Gaps = 1/453 (0%) Query: 4 AAAQSLPPAVVG-ALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTD 62 AA PPA AL++A IP QN GV V + +G+ +V+ S N PFNPAS MKLVTTD Sbjct: 57 AALSVTPPASFSKALQLAGIPAQNVGVYVQEVDGAGKVMASANAGTPFNPASTMKLVTTD 116 Query: 63 AALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQD 122 AALE+LGPT+ WKTQAY +G+ G VL GDLI KG GDPKLVLENFWL LRQ+RA+GI+D Sbjct: 117 AALELLGPTYRWKTQAYTNGSQVGNVLQGDLIFKGNGDPKLVLENFWLFLRQIRAKGIRD 176 Query: 123 IRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVS 182 IRG +VLDRS F S+YDP++FDGDP KPYN GPDALLLNY+ F+F P+ + V+V Sbjct: 177 IRGNIVLDRSTFDESTYDPSEFDGDPMKPYNVGPDALLLNYKALTFQFVPNPETRQVNVL 236 Query: 183 MDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSN 242 +DPPM+G+ ITPPRL C DWQGKL + DA GA+F+G+ A CG + WY++PY+MS+ Sbjct: 237 IDPPMSGYPITPPRLGSGNCDDWQGKLQASVDADGASFNGALPASCGEKTWYINPYKMSS 296 Query: 243 VQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMAR 302 QY GA F QMW DLGG F+G V +G + ++ E S LPEVIRDINKYSNNVMAR Sbjct: 297 TQYFGAVFRQMWTDLGGSFSGVVKNGVAPAGSTLVSEWNSVTLPEVIRDINKYSNNVMAR 356 Query: 303 QVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANV 362 QVLLT+ A++ P P ARAV+ WL +KGI+TNGL IENG+GLSR ER++ + + Sbjct: 357 QVLLTIAADILKVPATPDRGARAVQSWLSNKGIETNGLVIENGSGLSRNERISARTMGRM 416 Query: 363 LLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAAS 422 + ++SP+MPEFVSS+PLVGYDGTMR+RLK Q VAGQAH+KTGTLNDVR+IAGYV AAS Sbjct: 417 MAAAFQSPVMPEFVSSMPLVGYDGTMRKRLKNQSVAGQAHVKTGTLNDVRAIAGYVLAAS 476 Query: 423 GKTYVVVFLINHPAAPNGQKAQDALLQWVYENG 455 GK Y VV LINHP AP GQ AQD LLQWVYENG Sbjct: 477 GKYYAVVCLINHPNAPRGQAAQDGLLQWVYENG 509 >ref|YP_001352290.1| D-alanyl-D-alanine carboxypeptidase [Janthinobacterium sp. Marseille] gb|ABR89724.1| D-alanyl-D-alanine carboxypeptidase (pbp4, peptidase family s13) [Janthinobacterium sp. Marseille] Length = 475 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 270/451 (59%), Positives = 331/451 (73%), Gaps = 1/451 (0%) Query: 5 AAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAA 64 AA+ LP V AL+ + IPQ G V + G K + N FNPAS MKLVT+DAA Sbjct: 26 AAEGLPTVVSEALKRSAIPQSAVGTYVQEVSGQKPWIAVNETTG-FNPASTMKLVTSDAA 84 Query: 65 LEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIR 124 LE+LGPTF WKTQAY+ GTL+G VL+GDLI+KG GDPKLV ENFW LR++RA GI++IR Sbjct: 85 LELLGPTFNWKTQAYMTGTLNGDVLDGDLIIKGSGDPKLVTENFWQFLRKIRAAGIREIR 144 Query: 125 GKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMD 184 G L+LDRS F YD AQFDGDP KPYNAGPDALLLNY+ AF F P+ A V +++D Sbjct: 145 GNLILDRSIFEDMPYDAAQFDGDPLKPYNAGPDALLLNYKVFAFHFLPNVARNQVDITID 204 Query: 185 PPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQ 244 PP+A + + P L+ CGDWQGKL+ N F+GSYSA CG + WY+HPY M++ + Sbjct: 205 PPVATYPVMAPALTNGACGDWQGKLLPNMGRVSTNFTGSYSAACGEKTWYLHPYLMNHSE 264 Query: 245 YVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQV 304 Y G F Q+W D+GG F G V +G V P+AR + E QS +LPEVIRDINKYSNNVMARQ+ Sbjct: 265 YFGVVFRQLWNDVGGVFNGAVNNGMVPPAARFVTEWQSTSLPEVIRDINKYSNNVMARQL 324 Query: 305 LLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVLL 364 LLT+ A++ P P AR V+ WL +KG+DT+ + IENG+GLSR ER+ G++ +L+ Sbjct: 325 LLTVAADVLKVPASPERGARVVKTWLANKGMDTSQVVIENGSGLSRTERIPVGVMGRMLV 384 Query: 365 QTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGK 424 T++SP MPEF+SSLPLVGYDGTMR+RL Q VAG+AHIKTGTLNDVR+IAGYV AASGK Sbjct: 385 STFQSPTMPEFMSSLPLVGYDGTMRKRLTKQTVAGRAHIKTGTLNDVRAIAGYVLAASGK 444 Query: 425 TYVVVFLINHPAAPNGQKAQDALLQWVYENG 455 Y VV +INHP A GQ A DALLQW+YENG Sbjct: 445 RYAVVCIINHPNAVGGQAAHDALLQWIYENG 475 >ref|YP_001098959.1| putative D-alanyl-D-alanine carboxypeptidase [Herminiimonas arsenicoxydans] emb|CAL60832.1| putative Serine-type D-Ala-D-Ala carboxypeptidase [Herminiimonas arsenicoxydans] Length = 474 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 270/454 (59%), Positives = 327/454 (72%), Gaps = 5/454 (1%) Query: 3 HAAAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGS-KRVLVSNNIAQPFNPASVMKLVTT 61 HAA LP V AL+ + IP G V D G R+ V++ + FNPAS MKLVT+ Sbjct: 25 HAAGLPLP--VTDALKRSGIPLNAVGAYVQDVSGPVPRIAVNSMVG--FNPASTMKLVTS 80 Query: 62 DAALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQ 121 +AAL++LGP FTWKTQ Y GT SG VLNGDL++KG GDPKLV E FW LLRQ+RA GI+ Sbjct: 81 NAALDLLGPAFTWKTQVYATGTQSGDVLNGDLVIKGSGDPKLVTEKFWQLLRQIRAAGIR 140 Query: 122 DIRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSV 181 +IRG L+LDRS F SYD AQFDGDP KPYN GPDALLLNY+ AF F PD A V V Sbjct: 141 EIRGNLILDRSAFDGMSYDAAQFDGDPLKPYNVGPDALLLNYKVFAFHFLPDPARHLVDV 200 Query: 182 SMDPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS 241 S+DPP+AG+ ITPP L C DWQ K + + GA+F+GS++A CG + WY+HPY+MS Sbjct: 201 SVDPPLAGYPITPPVLLDGACADWQAKSLPTLNRKGASFAGSFAAACGEKTWYLHPYQMS 260 Query: 242 NVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMA 301 +Y F Q+W D+GG F G V DG + ARM+ E QSPALPEV+RDINKYSNNVMA Sbjct: 261 ATEYFNVVFRQLWTDVGGVFKGEVNDGVLPSGARMLTEWQSPALPEVVRDINKYSNNVMA 320 Query: 302 RQVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLAN 361 RQ+LLTL +++ P P R V+ WL KGIDT+ L IENG+GLSRIER++ L Sbjct: 321 RQLLLTLASDVLKLPATPERGGRVVKTWLAAKGIDTSQLVIENGSGLSRIERISAEALGR 380 Query: 362 VLLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAA 421 +L+ ++SP+MPE +S+LPL GYDGTMR+RL Q VAG+AHIKTG+LNDVR++AGYV AA Sbjct: 381 MLVAAFQSPVMPELMSALPLAGYDGTMRKRLLAQTVAGRAHIKTGSLNDVRAVAGYVLAA 440 Query: 422 SGKTYVVVFLINHPAAPNGQKAQDALLQWVYENG 455 SGK Y VV +INH AP GQ A DALLQWVYENG Sbjct: 441 SGKRYAVVCIINHINAPGGQAAHDALLQWVYENG 474 >ref|ZP_08275199.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium IMCC9480] gb|EGF31325.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacteraceae bacterium IMCC9480] Length = 461 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 247/451 (54%), Positives = 318/451 (70%), Gaps = 2/451 (0%) Query: 5 AAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAA 64 A LP V A + A I G+ V+D + VL S N P NPAS MKL+TT AA Sbjct: 11 AHAGLPAPVAAAFKRAGIAPSGIGIEVVDMASGRNVL-SLNSELPLNPASTMKLLTTSAA 69 Query: 65 LEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIR 124 L++LGPT+++ T+AY GTL GG+L GDLIL+G GDPKLV+ENFWL LR++RA+G++DIR Sbjct: 70 LDLLGPTYSFTTEAYRRGTLQGGLLQGDLILRGSGDPKLVIENFWLFLRKIRAQGVRDIR 129 Query: 125 GKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMD 184 G LVLDRS F + DPA FDGDP K YN GPDALLLN+R A F PD A G V V +D Sbjct: 130 GNLVLDRSAFDDTVIDPALFDGDPLKAYNVGPDALLLNFRALAVSFMPDRAQGVVKVRLD 189 Query: 185 PPMAGFTITPPRLSQEPC-GDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNV 243 P ++ + I PP+L+ C GDW+ + D +GA+F G Y+ CG + W + PY++S Sbjct: 190 PALSAYAIRPPQLTSGECIGDWRTAISATLDPAGASFDGPYALGCGEKSWQLSPYQLSRN 249 Query: 244 QYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQ 303 +Y+ F Q+W +LGG F G V+DG VT A + + +SP++PE+IRD+NK+SNNVMARQ Sbjct: 250 RYLELVFRQLWTELGGTFDGSVIDGVVTTDAVAVAQWESPSMPELIRDVNKFSNNVMARQ 309 Query: 304 VLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVL 363 + LTLG+ + QP + A+ GWL + ID +GL +ENGAGLSR+ER++ L +L Sbjct: 310 LFLTLGSTVQLQPASIAASRSAIAGWLATRQIDASGLVLENGAGLSRLERISSRTLGALL 369 Query: 364 LQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASG 423 +R+P MPEFVSSLPLVGYDGTMR+RL+ +GV+G AHIKTG+L DVRSIAGYVQAASG Sbjct: 370 TAAYRAPTMPEFVSSLPLVGYDGTMRKRLRFEGVSGHAHIKTGSLQDVRSIAGYVQAASG 429 Query: 424 KTYVVVFLINHPAAPNGQKAQDALLQWVYEN 454 K + VV LIN P A G +AQDALLQWV+EN Sbjct: 430 KQFAVVCLINDPNAARGAEAQDALLQWVFEN 460 >ref|ZP_04579982.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes OXCC13] gb|EEO30955.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes OXCC13] Length = 473 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 208/451 (46%), Positives = 294/451 (65%), Gaps = 5/451 (1%) Query: 6 AQSLPPAVVGALRVAHIPQQNTGVLV--IDTEGSKRVLVSNNIAQPFNPASVMKLVTTDA 63 AQ LP +V L +A IP+ + G++V +D+ S+ +++N F PAS MK++TT A Sbjct: 25 AQQLPSSVKYELELAGIPENSVGIVVEQVDSNVSR---LTHNADIAFAPASTMKVLTTYA 81 Query: 64 ALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDI 123 ALE+LGP++TW+T AYI G GVL GDLI+KG GDP + WL +RQ++ G++DI Sbjct: 82 ALELLGPSYTWETGAYISGKPEDGVLYGDLIIKGSGDPVFSQKELWLFIRQIQDAGVRDI 141 Query: 124 RGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSM 183 RG ++LDRS F + S+D A FD +P KPYNAGPDALLLN + R P+ + TV V Sbjct: 142 RGNVILDRSVFKTGSFDAAAFDAEPLKPYNAGPDALLLNEKKIDVRLVPNESENTVKVVF 201 Query: 184 DPPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNV 243 +P + G ITPP LS CG+W+ ++L D A F G YS+ C ++W V PY+MSN Sbjct: 202 EPRLDGVKITPPLLSNGECGNWKKDIVLQFDDRHANFDGIYSSTCQEKIWSVLPYQMSNT 261 Query: 244 QYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQ 303 +Y + F+ +W + GGRF GR +DG + P A + E +SP L V+ +NK+SNNVMARQ Sbjct: 262 RYFESVFSTLWKEAGGRFKGRFVDGTLPPEALKIAEWRSPELSSVVSTVNKHSNNVMARQ 321 Query: 304 VLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVL 363 +LL +G G D +A++ WL K I + L IENG+GLSR+E+++P ++ +L Sbjct: 322 LLLGIGHHELGDNADESMGIKAIKNWLASKNISSGDLVIENGSGLSRLEKISPLTMSRIL 381 Query: 364 LQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASG 423 + SP+MPE +SS P+ G DGTM +RLK +AG+AHIKTG +++VR+IAGYV A SG Sbjct: 382 KAAFHSPVMPELMSSFPIAGKDGTMSKRLKEDAIAGKAHIKTGAIDNVRAIAGYVLAKSG 441 Query: 424 KTYVVVFLINHPAAPNGQKAQDALLQWVYEN 454 + Y+VV ++N P A + + LL W YEN Sbjct: 442 RRYIVVCMVNDPNAKLSRNMLNELLNWTYEN 472 >ref|ZP_04577832.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes HOxBLS] gb|EEO28794.1| D-alanyl-D-alanine carboxypeptidase [Oxalobacter formigenes HOxBLS] Length = 471 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 213/452 (47%), Positives = 288/452 (63%), Gaps = 3/452 (0%) Query: 5 AAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAA 64 AQ LP + + A IP++ G+ VI G V +N F+PAS MK++TT AA Sbjct: 22 CAQELPVEIASEFQRAGIPEEAVGI-VIQPIGLSEPKVLHNAGTVFHPASTMKVLTTYAA 80 Query: 65 LEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIR 124 LE+LGP+FTW+T AYI G + G+L GDLI++G GDP ++ WL +R+++ GI++IR Sbjct: 81 LELLGPSFTWQTGAYITGEVRHGILYGDLIIRGSGDPSFSQKDLWLFIRKIQDSGIREIR 140 Query: 125 GKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMD 184 GK+VLDRS F ++D + FD P KPYNAGPD LLLN + F P V V ++ Sbjct: 141 GKVVLDRSVFGRINFDASVFDDAPLKPYNAGPDGLLLNEKRIDVYFAPHGDKDEVEVVLE 200 Query: 185 PPMAGFTITPPRLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQ 244 P M G TI PP + CGDW+ + ++ D A F G Y CG R W +HPY+MS+ + Sbjct: 201 PRMEGITIVPPVAASSACGDWKNGITVHFDDKIAYFEGEYPLACGIRTWAIHPYQMSDRR 260 Query: 245 YVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQV 304 Y + F ++W + GG F G+V +G + A + E S L V+ +NKYSNNVMARQ+ Sbjct: 261 YFESVFVKLWRESGGVFKGQVEEGLLPADAVLKAEWTSQELGLVVSAVNKYSNNVMARQL 320 Query: 305 LLTLGAEMTGQPGDPVNAARAVRG-WLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVL 363 LLTLG + G G + AV G WL KGI NGL +ENG+GLSR ER++P +A +L Sbjct: 321 LLTLGEKFYGT-GATIEQGIAVIGNWLTQKGISANGLVVENGSGLSREERISPLTMAEIL 379 Query: 364 LQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASG 423 + SP+MPE VSSLP+ G DGTM +RL+ +AG+AHIKTG +NDVR+IAGYV A SG Sbjct: 380 NAAFMSPVMPELVSSLPIAGRDGTMSKRLRDDPIAGKAHIKTGAINDVRAIAGYVLAKSG 439 Query: 424 KTYVVVFLINHPAAPNGQKAQDALLQWVYENG 455 + Y++V +INHP A G++ + LL W YENG Sbjct: 440 RRYLIVCMINHPNAKAGRQVLNRLLSWAYENG 471 >ref|YP_003168616.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV36687.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 441 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 207/446 (46%), Positives = 285/446 (63%), Gaps = 7/446 (1%) Query: 9 LPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEML 68 +P V AL+ A IP ++ G++V +G L+S+N Q NPASVMKLVTT A+LE+L Sbjct: 1 MPATVSEALQEAGIPARSLGIVVQPVDGGP-ALLSHNARQAMNPASVMKLVTTYASLELL 59 Query: 69 GPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLV 128 GP TW+T+ + + G L+G+L L+G GDPKL LE FWLLLRQLRARG+ +I G LV Sbjct: 60 GPAHTWRTEILTEAVPNNGRLDGNLYLRGSGDPKLALEQFWLLLRQLRARGLSEISGDLV 119 Query: 129 LDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPPMA 188 LDRS FA +++DP +FD +P +PYNAGPDALL+N ++ +PD A V V + P Sbjct: 120 LDRSAFALAAHDPGEFDNEPLRPYNAGPDALLVNLKSVRLTLQPDPARKAVKVIAETPAE 179 Query: 189 GFTITPP-RLSQEPCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMSNVQYVG 247 G I L +E CGDW+ ++ +GS+SA CG + ++ P+ ++VQ V Sbjct: 180 GLRIVNRLTLGREACGDWREQIKPVISGLSIELAGSFSAACGEKALHLAPW-TADVQ-VE 237 Query: 248 ASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMARQVLLT 307 + F +W +LGG GRV +G+ +AR + +SP L E++RDINKYSNNVMARQ+ L+ Sbjct: 238 SLFRALWRELGGSLGGRVREGRTPVTARPVAVQESPTLGEIVRDINKYSNNVMARQLFLS 297 Query: 308 LGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANVLLQTW 367 L E +P A R + GWL KG+ L ++NG+GLSR ER++ LA +L W Sbjct: 298 LDGE---RPATAEGARRQIAGWLQGKGLTLPELVLDNGSGLSRSERISAQGLAQLLRAAW 354 Query: 368 RSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAASGKTYV 427 +SP+MPE ++SLPL G DGT+R+RL G+AH+KTG L VR+IAGY SG+ ++ Sbjct: 355 QSPVMPELIASLPLAGVDGTLRKRLNDGAATGRAHLKTGYLEGVRAIAGYALDNSGRRWI 414 Query: 428 VVFLINHPAAPNGQKAQDALLQWVYE 453 VV LIN P A + A DALL WV + Sbjct: 415 VVCLINDPKARLAKPAIDALLLWVTK 440 >ref|YP_003848399.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Gallionella capsiferriformans ES-2] gb|ADL56635.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Gallionella capsiferriformans ES-2] Length = 459 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 205/451 (45%), Positives = 278/451 (61%), Gaps = 11/451 (2%) Query: 3 HAAAQSLPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTD 62 +A A LPPAV+ L+ A IP T + V G+ + +S N QP NPAS MKL+TT Sbjct: 15 NATATHLPPAVLRELKSAGIPLSATSITVRKI-GAPKAAISINAEQPMNPASTMKLLTTF 73 Query: 63 AALEMLGPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQD 122 A LE+LGP +TWKT+AY+DG L GVL GDLILKG GDPK +E FWL + +LRARG+++ Sbjct: 74 AGLELLGPAYTWKTEAYLDGKLENGVLQGDLILKGYGDPKFTIEQFWLWMAELRARGLRE 133 Query: 123 IRGKLVLDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVS 182 IRG LV+DRS+F D FD DP + YN PDALLLN+ T R+ P+ + V Sbjct: 134 IRGNLVIDRSFFDLPQLDSGAFDNDPVRAYNVTPDALLLNFNTLRLRYIPEG--NRLRVI 191 Query: 183 MDPPMAGFTITPPRLSQE-PCGDWQGKLMLNNDASGATFSGSYSADCGARVWYVHPYRMS 241 ++P + G + Q C DW + + + G Y A+CG R + +S Sbjct: 192 IEPMLEGVRLDSQLAPQAGSCEDWDDTIRVQANDERLLLQGGYPAECGEREHSLSV--LS 249 Query: 242 NVQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMA 301 + +YV A F W LGG GR DG ++ SA++ +S + IRDINKYSNNVMA Sbjct: 250 HSRYVDAVFRAAWHQLGGSLTGRQRDGLLSSSAQLFSTHRSEPMSLAIRDINKYSNNVMA 309 Query: 302 RQVLLTLGAEMTGQ-PGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLA 360 RQ+ LTLG + PG + A+R WL KG++ L +ENGAGLSR+ER++ +A Sbjct: 310 RQLFLTLGTTTSASIPG----STAAMRSWLTKKGLNFPELVLENGAGLSRVERISAEHMA 365 Query: 361 NVLLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQA 420 +L SP E ++SLP++G DG++++RLK A AH+KTGTL+ V+++AG+VQA Sbjct: 366 QLLQSITESPYSAELIASLPILGIDGSVKKRLKNSPAASHAHLKTGTLDGVKTLAGFVQA 425 Query: 421 ASGKTYVVVFLINHPAAPNGQKAQDALLQWV 451 SGK + VVF INHP A GQ AQDAL++W+ Sbjct: 426 HSGKQWSVVFFINHPNAKRGQAAQDALIEWL 456 >ref|ZP_08506702.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Methyloversatilis universalis FAM5] gb|EGK69829.1| D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Methyloversatilis universalis FAM5] Length = 481 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 206/450 (45%), Positives = 274/450 (60%), Gaps = 12/450 (2%) Query: 9 LPPAVVGALRVAHIPQQNTGVLVIDTEGSKRVLVSNNIAQPFNPASVMKLVTTDAALEML 68 LP V+ AL+ A IP V+V EG +S+ NPASVMKLVTT AAL+ L Sbjct: 27 LPAPVLQALKAAEIPPSAVSVVVQPVEGGP-ARISHQAKLAMNPASVMKLVTTYAALDTL 85 Query: 69 GPTFTWKTQAYIDGTLSGGVLNGDLILKGGGDPKLVLENFWLLLRQLRARGIQDIRGKLV 128 GP F+W+T+ + GVL+G L ++G GDP L +E WLLLR+LR+RG++DIRG +V Sbjct: 86 GPAFSWRTELLVTKPPRDGVLDGPLYIRGSGDPALGMEQLWLLLRELRSRGVRDIRGDVV 145 Query: 129 LDRSYFASSSYDPAQFDGDPQKPYNAGPDALLLNYRTQAFRFEPDAASGTVSVSMDPPMA 188 DRS +A++SYDP FD +P PYN GPDALL + R +P G+ ++ +PP+ Sbjct: 146 TDRSRYATASYDPGAFDNEPMAPYNVGPDALLFAHNALRIRLQP-VEGGSPALWAEPPLE 204 Query: 189 GFTI-TPPRLSQEPCGDWQGKLMLNNDASG-----ATFSGSYSADCGARVWYVHPYRMSN 242 G I +L CGDW+ L +G G Y+ DCG R+W V P + + Sbjct: 205 GVQIDNRVQLVAGECGDWKDTLTATVQPAGDGRLTLQIGGRYARDCGERIWNVAP--LPH 262 Query: 243 VQYVGASFAQMWADLGGRFAGRVLDGQVTPSARMMVEVQSPALPEVIRDINKYSNNVMAR 302 ++ + MWA+LGGR AGR+ DG V P A + + SP L EV+RDINKYSNNVMAR Sbjct: 263 GEFFARALRAMWAELGGRLAGRIRDGVVPPEALTLGGIDSPPLAEVVRDINKYSNNVMAR 322 Query: 303 QVLLTLGAEMTGQPGDPVNAARAVRGWLGDKGIDTNGLAIENGAGLSRIERVTPGLLANV 362 Q+ LTL D A +R W +G+ N L ++NG+GLSR ER++ LA V Sbjct: 323 QLFLTLAPAGAPA--DTAAAQAGLRAWATRRGLTLNSLVMDNGSGLSRAERLSAADLATV 380 Query: 363 LLQTWRSPLMPEFVSSLPLVGYDGTMRRRLKTQGVAGQAHIKTGTLNDVRSIAGYVQAAS 422 L W SP+MPEF+SSLP+ DGT+RRR KT +AGQAH+KTG+L D RSIAGY+ + Sbjct: 381 LRHAWASPVMPEFMSSLPVYAVDGTLRRRQKTSPLAGQAHLKTGSLADTRSIAGYLLDRN 440 Query: 423 GKTYVVVFLINHPAAPNGQKAQDALLQWVY 452 GK ++V +NHP A Q DALL+WV+ Sbjct: 441 GKRVLLVAWLNHPNAKRAQPVLDALLEWVW 470