BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0017.0034.p         (60 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776760.1| hypothetical protein Hsero_3371 [Herbaspiril...   112   2e-23
ref|YP_004754351.1| hypothetical protein CFU_3704 [Collimonas fu...    85   3e-15

>ref|YP_003776760.1| hypothetical protein Hsero_3371 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64852.1| hypothetical protein Hsero_3371 [Herbaspirillum seropedicae SmR1]
          Length = 113

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1   MPNLIMNNLMFFLPMALAGLLLCGEVPVASRLVRTSLRAVGAVFGALLALLVLEALPVLI 60
           MPNLIMNNLMFFLPMALAGLLLCGEVPVASRLVRTSLRAVGAVFGALLALLVLEALPVLI
Sbjct: 54  MPNLIMNNLMFFLPMALAGLLLCGEVPVASRLVRTSLRAVGAVFGALLALLVLEALPVLI 113


>ref|YP_004754351.1| hypothetical protein CFU_3704 [Collimonas fungivorans Ter331]
 gb|AEK63528.1| hypothetical protein CFU_3704 [Collimonas fungivorans Ter331]
          Length = 103

 Score = 85.1 bits (209), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/60 (68%), Positives = 54/60 (90%)

Query: 1   MPNLIMNNLMFFLPMALAGLLLCGEVPVASRLVRTSLRAVGAVFGALLALLVLEALPVLI 60
           M NL+MNNL+FF+P A+AG++LCGEVPVAS++ R SLRA+GAV GALLAL++LEA+P L+
Sbjct: 44  MVNLVMNNLLFFVPAAIAGVVLCGEVPVASKVARGSLRAIGAVCGALLALIILEAIPALL 103