BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0022.p (218 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776770.1| transmembrane protein [Herbaspirillum serope... 438 e-121 ref|YP_259833.2| hypothetical protein PFL_2726 [Pseudomonas fluo... 245 3e-63 ref|YP_004754353.1| putative transmembrane protein [Collimonas f... 240 1e-61 ref|YP_348626.1| hypothetical protein Pfl01_2895 [Pseudomonas fl... 231 4e-59 ref|YP_004354720.1| hypothetical protein PSEBR_a3394 [Pseudomona... 228 4e-58 gb|EGH97244.1| hypothetical protein PLA106_14171 [Pseudomonas sy... 228 5e-58 ref|YP_002872302.1| hypothetical protein PFLU2719 [Pseudomonas f... 228 6e-58 ref|YP_608563.1| hypothetical protein PSEEN3002 [Pseudomonas ent... 227 1e-57 ref|YP_236191.1| hypothetical protein Psyr_3121 [Pseudomonas syr... 223 2e-56 ref|ZP_07775136.1| protein of unknown function DUF1345 [Pseudomo... 221 4e-56 >ref|YP_003776770.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64862.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 218 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 218/218 (100%), Positives = 218/218 (100%) Query: 1 MSVARQIVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD 60 MSVARQIVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD Sbjct: 1 MSVARQIVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD 60 Query: 61 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRSKLLRYAFTASTVFG 120 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRSKLLRYAFTASTVFG Sbjct: 61 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRSKLLRYAFTASTVFG 120 Query: 121 AWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVG 180 AWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVG Sbjct: 121 AWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVG 180 Query: 181 VATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAGN 218 VATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAGN Sbjct: 181 VATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAGN 218 >ref|YP_259833.2| hypothetical protein PFL_2726 [Pseudomonas fluorescens Pf-5] gb|AAY91999.2| membrane protein of unknown function, DUF1345 family [Pseudomonas fluorescens Pf-5] Length = 213 Score = 245 bits (625), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 129/211 (61%), Positives = 157/211 (74%), Gaps = 5/211 (2%) Query: 7 IVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYL-LSLWLMMLRADAEAVR 65 +++ HPRL IG+ +G + PA T TG+ L+GWNA VW YL L LWL + RA A+ VR Sbjct: 4 VIRTHPRLTIGVLIGCAIGLLAPAQTLTGKILIGWNAAVWSYLALMLWLTV-RARADEVR 62 Query: 66 RLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRS-KLLRYAFTASTVFGAWLL 124 R+AE EDE+A +VL++VCVAA+ASL+AI LEL G+ D + +L+ Y FT TV G+WLL Sbjct: 63 RIAEAEDENAGLVLLIVCVAAIASLVAITLELVGSKDLDSTQRLVHYGFTGLTVIGSWLL 122 Query: 125 IGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVGVATR 184 +G IF+LHYARL+Y D A LRF +G PDYWDFLYFSFTI VAVQTSDVGVATR Sbjct: 123 VGVIFSLHYARLYYTWDGKEPA--LRFAEGPTNPDYWDFLYFSFTIGVAVQTSDVGVATR 180 Query: 185 ALRKTVLAHSLICFVFNAAIIGLSINIAAGL 215 LRK VLA SLI F+FN AI+G SINIAAGL Sbjct: 181 ELRKIVLAQSLIGFLFNTAILGFSINIAAGL 211 >ref|YP_004754353.1| putative transmembrane protein [Collimonas fungivorans Ter331] gb|AEK63530.1| putative transmembrane protein [Collimonas fungivorans Ter331] Length = 235 Score = 240 bits (612), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 120/214 (56%), Positives = 152/214 (71%), Gaps = 3/214 (1%) Query: 5 RQIVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRADAEAV 64 R + HPRL+I L +G P ++ R L+GWNAGVW YL +LW MM+RA+A V Sbjct: 24 RLVFHTHPRLMIALIIGFAVWAIQPTSSHLTRLLIGWNAGVWSYLATLWWMMVRANAGQV 83 Query: 65 RRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHG-DRSKLLRYAFTASTVFGAWL 123 +R A EDE+ +LV++CVAAV+S+ A++L LA K LRY FT TV G+W Sbjct: 84 KRRAAVEDENDTTILVIICVAAVSSIGAVVLGLAHTQDFLPGPKELRYMFTGMTVLGSWF 143 Query: 124 LIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVGVAT 183 L+GTIF LHYARLFYA D LPLRFPD ++ PDYWDFLYFSFT++VAVQTSDV + T Sbjct: 144 LVGTIFALHYARLFYACAGD--KLPLRFPDDEKNPDYWDFLYFSFTMAVAVQTSDVSIMT 201 Query: 184 RALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 R++RK VL S++ F+FN+AI+GLSINIAAGL G Sbjct: 202 RSMRKIVLMQSVLTFLFNSAILGLSINIAAGLVG 235 >ref|YP_348626.1| hypothetical protein Pfl01_2895 [Pseudomonas fluorescens Pf0-1] gb|ABA74636.1| putative membrane protein [Pseudomonas fluorescens Pf0-1] Length = 213 Score = 231 bits (590), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 126/218 (57%), Positives = 155/218 (71%), Gaps = 11/218 (5%) Query: 5 RQIVQVHPRL----LIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD 60 R + + HPRL L GLAVG++ PA + + L+GWNAG+W YL+ + + +RA Sbjct: 2 RFLARTHPRLSAAALFGLAVGLLT----PADSVISKILIGWNAGIWTYLILMLWLTIRAK 57 Query: 61 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRS-KLLRYAFTASTVF 119 A V+R+AE EDE+A +VL +VC+AA+ASL I +ELAG+ + + KLL Y FTA TV Sbjct: 58 APDVKRIAEVEDENAGLVLFVVCIAALASLATITVELAGSKDLETTRKLLHYGFTALTVI 117 Query: 120 GAWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDV 179 G+WLLIG IF +HYARLFY D AL RF +G PDYWDFLYFSFTI VAVQT+DV Sbjct: 118 GSWLLIGVIFCVHYARLFYTWDGKEPAL--RFSEGLTTPDYWDFLYFSFTIGVAVQTADV 175 Query: 180 GVATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 GVATR +RK VLA SLI FVFN AI+G SINIAAGL G Sbjct: 176 GVATREIRKIVLAQSLIGFVFNTAILGFSINIAAGLFG 213 >ref|YP_004354720.1| hypothetical protein PSEBR_a3394 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA69716.1| Conserved hypothetical protein; putative membrane protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 213 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 120/213 (56%), Positives = 152/213 (71%), Gaps = 5/213 (2%) Query: 7 IVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRADAEAVRR 66 + + HPRL +G+ + +P + + L+GWN GVW YL+ + + +RA A VRR Sbjct: 4 LARTHPRLSSATVLGLAVGILVPVDSIISKILIGWNVGVWTYLVLMSWLTVRAKAPDVRR 63 Query: 67 LAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRS-KLLRYAFTASTVFGAWLLI 125 +AE EDE+A +VL++VC+AA+ASL I LELAG+ + + KLL Y FTA TV G+WLLI Sbjct: 64 IAEIEDENAGLVLLVVCIAALASLATITLELAGSRDLNAAGKLLHYGFTAMTVIGSWLLI 123 Query: 126 GTIFTLHYARLFYA-EDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVGVATR 184 G IF++HYARL+Y E +P LRF +G P+YWDFLYFSFTI VAVQT+DVGVATR Sbjct: 124 GVIFSVHYARLYYTWEGKEPA---LRFAEGLTTPNYWDFLYFSFTIGVAVQTADVGVATR 180 Query: 185 ALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 LRK VLA SLI FVFN AI+G SINIAAGL G Sbjct: 181 QLRKIVLAQSLIGFVFNTAILGFSINIAAGLFG 213 >gb|EGH97244.1| hypothetical protein PLA106_14171 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 217 Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 119/216 (55%), Positives = 151/216 (69%), Gaps = 7/216 (3%) Query: 5 RQIVQVHPRL----LIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD 60 R + + PRL L+GL GI A +P T T L GW+ GVW YL+ +++ L ++ Sbjct: 2 RHLARTRPRLTLAALVGLTAGIAWAWLIPHATLTQSLLTGWDTGVWLYLILIFVRTLHSN 61 Query: 61 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSH-GDRSKLLRYAFTASTVF 119 A+ VRR+A EDE+A V+LV VCVA +ASL AI+ E+AG+ +K+L +AFT TV Sbjct: 62 ADDVRRVALMEDENAGVILVTVCVAGLASLAAIIFEVAGSKGLSSDAKMLHHAFTGLTVI 121 Query: 120 GAWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDV 179 G+WL+IG IF+LHYAR+FY + AL F G++ PDYWDFLYFSFT+SVAVQTSDV Sbjct: 122 GSWLMIGVIFSLHYARMFYTWNGKEPALA--FVGGEKHPDYWDFLYFSFTLSVAVQTSDV 179 Query: 180 GVATRALRKTVLAHSLICFVFNAAIIGLSINIAAGL 215 GVATR +RK VL SLICFVFN AI+G SINIAA L Sbjct: 180 GVATREMRKVVLGQSLICFVFNTAILGFSINIAASL 215 >ref|YP_002872302.1| hypothetical protein PFLU2719 [Pseudomonas fluorescens SBW25] emb|CAY48950.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 213 Score = 228 bits (580), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 126/217 (58%), Positives = 151/217 (69%), Gaps = 13/217 (5%) Query: 7 IVQVHPRL----LIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYL-LSLWLMMLRADA 61 + + HPRL ++GLAVG++A PA T + L+GWNAGVW YL L LWL RA A Sbjct: 4 LARTHPRLSAAAVLGLAVGLLA----PADTLVSKILIGWNAGVWTYLVLMLWLTR-RAKA 58 Query: 62 EAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSH-GDRSKLLRYAFTASTVFG 120 E V+R+AE EDE+A +VL VC+AA+ASL I EL G+ +LL Y FT TV G Sbjct: 59 EDVKRIAEVEDENAGLVLFTVCIAAIASLATITFELVGSKDLATSERLLHYGFTGLTVIG 118 Query: 121 AWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVG 180 +WLLIG IF++HYARL+Y D AL RF +G P+YWDFLYFSFTI VAVQTSDVG Sbjct: 119 SWLLIGVIFSVHYARLYYTWDGKEPAL--RFAEGLLTPNYWDFLYFSFTIGVAVQTSDVG 176 Query: 181 VATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 VATR +RK VL SLI F+FN AI+G SINIAAGL G Sbjct: 177 VATRGMRKVVLGQSLIGFLFNTAILGFSINIAAGLFG 213 >ref|YP_608563.1| hypothetical protein PSEEN3002 [Pseudomonas entomophila L48] emb|CAK15772.1| conserved hypothetical protein; putative membrane protein [Pseudomonas entomophila L48] Length = 215 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 121/215 (56%), Positives = 148/215 (68%), Gaps = 5/215 (2%) Query: 5 RQIVQVHPRLLIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRADAEAV 64 + + HPRL I + G++ A +PA L GWN GVW YLL + + LRA A V Sbjct: 4 HHLTRTHPRLSIAILAGLLGAWLIPADDTVQHILAGWNLGVWLYLLMVLWLSLRATAAKV 63 Query: 65 RRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSHGDRSKL-LRYAFTASTVFGAWL 123 R++A EDE+A +VLV V VAA+ASL A+ L+L + + L L Y +T TV G+WL Sbjct: 64 RQVASIEDENAGLVLVTVIVAAIASLAAVTLQLVSSRGLEGGALALHYLYTGLTVAGSWL 123 Query: 124 LIGTIFTLHYARLFYAED-DDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDVGVA 182 LIG IF+LHYARLFY D +P PLRFPD +R PDYWDF YFSFTISVAVQTSD+GV Sbjct: 124 LIGCIFSLHYARLFYTGDRHEP---PLRFPDNERNPDYWDFHYFSFTISVAVQTSDIGVG 180 Query: 183 TRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 RA+RK VLAHSL+ FVFN AI+G +INIAAGL G Sbjct: 181 GRAMRKAVLAHSLVGFVFNTAILGFTINIAAGLLG 215 >ref|YP_236191.1| hypothetical protein Psyr_3121 [Pseudomonas syringae pv. syringae B728a] gb|AAY38153.1| Protein of unknown function DUF1345 [Pseudomonas syringae pv. syringae B728a] gb|EGH72889.1| hypothetical protein PSYAR_20250 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 217 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/216 (56%), Positives = 154/216 (71%), Gaps = 7/216 (3%) Query: 5 RQIVQVHPRL----LIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYLLSLWLMMLRAD 60 R + + PRL L+GL GI + +P +T T L GW+ GVW YL+ +++ LR+D Sbjct: 2 RHLARTRPRLTLAALVGLTAGIAWSWLIPHSTLTQSLLTGWDTGVWLYLIMIFIRTLRSD 61 Query: 61 AEAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSH-GDRSKLLRYAFTASTVF 119 AE VRR+A EDE+A V+LV VCVAA+ASL AI+ E+AG+ + +++L +AFT TV Sbjct: 62 AEDVRRVAMREDENAGVILVTVCVAALASLAAIIFEIAGSKGLSNDARMLHHAFTGLTVI 121 Query: 120 GAWLLIGTIFTLHYARLFYAEDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDV 179 G+WL+IG IF+LHYAR+FY AL F G++ PDYWDFLYFSFTISVAVQTSDV Sbjct: 122 GSWLMIGVIFSLHYARMFYTWKGKEPALA--FVGGEKNPDYWDFLYFSFTISVAVQTSDV 179 Query: 180 GVATRALRKTVLAHSLICFVFNAAIIGLSINIAAGL 215 GVATR +RK VL SLICFVFN AI+G SINIAA L Sbjct: 180 GVATREMRKVVLGQSLICFVFNTAILGFSINIAASL 215 >ref|ZP_07775136.1| protein of unknown function DUF1345 [Pseudomonas fluorescens WH6] gb|EFQ63731.1| protein of unknown function DUF1345 [Pseudomonas fluorescens WH6] Length = 234 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 125/218 (57%), Positives = 150/218 (68%), Gaps = 15/218 (6%) Query: 7 IVQVHPRL----LIGLAVGIVAAVFLPATTWTGRCLVGWNAGVWFYL-LSLWLMMLRADA 61 + + HPRL ++GLAVGI+A PA T + L+GWNAGVW YL L LWL RA A Sbjct: 25 LARTHPRLSAAAVLGLAVGILA----PADTVVSKILIGWNAGVWTYLVLMLWLTS-RARA 79 Query: 62 EAVRRLAETEDESAQVVLVMVCVAAVASLLAILLELAGNSH-GDRSKLLRYAFTASTVFG 120 E V+R+AE EDE+A +VL V +AA+ASL I EL G+ +LL Y FT TV G Sbjct: 80 EDVKRIAEVEDENAGLVLFTVSIAAIASLATITFELVGSKDLAATERLLHYGFTGLTVIG 139 Query: 121 AWLLIGTIFTLHYARLFYA-EDDDPQALPLRFPDGQRQPDYWDFLYFSFTISVAVQTSDV 179 +WLLIG +F++HY RL+Y E +P LRF +G P+YWDFLYFSFTI VAVQTSDV Sbjct: 140 SWLLIGVVFSVHYPRLYYTWEGKEPA---LRFAEGLLTPNYWDFLYFSFTIGVAVQTSDV 196 Query: 180 GVATRALRKTVLAHSLICFVFNAAIIGLSINIAAGLAG 217 GVATR +RK VL SLI FVFN AI+G SINIAAGL G Sbjct: 197 GVATRGMRKVVLGQSLIGFVFNTAILGFSINIAAGLFG 234