BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0132.p (561 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775521.1| transmembrane protein [Herbaspirillum serope... 1113 0.0 ref|YP_004751969.1| hypothetical protein CFU_1314 [Collimonas fu... 644 0.0 ref|YP_727765.1| hypothetical protein H16_A3328 [Ralstonia eutro... 546 e-153 ref|YP_004687051.1| hypothetical protein CNE_1c32650 [Cupriavidu... 546 e-153 ref|YP_002006770.1| hypothetical protein RALTA_A2781 [Cupriavidu... 544 e-152 ref|YP_585328.1| hypothetical protein Rmet_3187 [Cupriavidus met... 542 e-152 ref|YP_297236.1| hypothetical protein Reut_A3032 [Ralstonia eutr... 541 e-151 ref|YP_001900685.1| hypothetical protein Rpic_3131 [Ralstonia pi... 523 e-146 ref|YP_002982708.1| hypothetical protein Rpic12D_2765 [Ralstonia... 518 e-144 ref|YP_003744516.1| hypothetical protein RCFBP_10567 [Ralstonia ... 501 e-139 >ref|YP_003775521.1| transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63613.1| transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 743 Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/546 (99%), Positives = 546/546 (100%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD Sbjct: 170 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 229 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR Sbjct: 230 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 289 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA Sbjct: 290 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 349 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ Sbjct: 350 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 409 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL Sbjct: 410 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 469 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS Sbjct: 470 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 529 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA Sbjct: 530 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 589 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL Sbjct: 590 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 649 Query: 481 EASQHLAEAQRLLAPQPRKRGGAVTVSPQAPQDKALSGKIELIGPLPPEPVPAEASAWSG 540 EASQHLAEAQRLLAPQPRKRGGAVTVSPQAPQDKALSGKIELIGPLPPEPVPAEASAWSG Sbjct: 650 EASQHLAEAQRLLAPQPRKRGGAVTVSPQAPQDKALSGKIELIGPLPPEPVPAEASAWSG 709 Query: 541 WDNLRQ 546 WDNLR+ Sbjct: 710 WDNLRR 715 >ref|YP_004751969.1| hypothetical protein CFU_1314 [Collimonas fungivorans Ter331] gb|AEK61146.1| protein of unknown function DUF893, YccS/YhfK [Collimonas fungivorans Ter331] Length = 732 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/498 (62%), Positives = 394/498 (79%), Gaps = 4/498 (0%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAEALFELARY+ IKA+FYD+ DL QFN LVRQQIV+A+KQQASRDLILRD ++D Sbjct: 179 VLAEALFELARYINIKADFYDMHVDLNSQFNTLVRQQIVLAEKQQASRDLILRDSKNQED 238 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 +LVQVH M +LYE +LSTH DYA LR+H DA+V+ +LRDL +KAA+DIE+IAYAITR Sbjct: 239 AILVQVHFGMFDLYEHILSTHTDYAILRRHLADAEVLTYLRDLVSKAAKDIETIAYAITR 298 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPG-PRQASEEALTILRVTYNKIRDIIELISQVHQ 179 +AS +++YKAE+R+++ E+ +L Q + SEEAL ILR TY KI D I++I Q+H Sbjct: 299 KRASFASISYKAEMRSIESELQQLQQDSLAGKVSEEALDILRTTYTKICDAIDMIGQLHH 358 Query: 180 ATQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIAN 239 ATQ+ P+P+L G DMTPFLTQQK++ +L+ NLRWQSP FRFA+R ALA++ GL A+ Sbjct: 359 ATQSVQGPLPVLMGKDMTPFLTQQKYQLGVLVSNLRWQSPTFRFAVRAALAISCGLLAAD 418 Query: 240 QLPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAV 299 LPY HGYWIVLTI IILKP+FS TKQR +DRL+GT+IGC+ T LILRFVH P+ L Sbjct: 419 ALPYAGHGYWIVLTIAIILKPSFSQTKQRRSDRLVGTLIGCVATALILRFVHEPVALLGF 478 Query: 300 LFAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVP-AGHQGVIGERLIDTIIGVVIATV 358 LF A+VAAPAF Y+KYRYTAIAAS+QIL+ +NL++P +GH VIGERLIDT+IG IAT Sbjct: 479 LFMATVAAPAFIYVKYRYTAIAASMQILLQINLVIPSSGH--VIGERLIDTLIGAAIATA 536 Query: 359 FSYVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALI 418 FS+VLP+WEYR LP+L+RNVLKS+QR+L A ++L+GKV DDF YRVCRK F+DS++ L+ Sbjct: 537 FSFVLPSWEYRTLPQLVRNVLKSNQRFLEAGNNLLQGKVLDDFIYRVCRKRFLDSISELV 596 Query: 419 SALVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEET 478 S LVRM+DEPA+K RAV LN+FIVQNYLV AH+AALR++LRR+ E LPQ V+ ++ Sbjct: 597 STLVRMLDEPASKHRAVENLNQFIVQNYLVIAHVAALRMLLRRNAEGLPQDAVNGELDAA 656 Query: 479 YLEASQHLAEAQRLLAPQ 496 S+ L A+++L P Sbjct: 657 TARVSKTLGLAEQVLDPN 674 >ref|YP_727765.1| hypothetical protein H16_A3328 [Ralstonia eutropha H16] emb|CAJ94397.1| conserved hypothetical membrane protein [Ralstonia eutropha H16] Length = 773 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 276/516 (53%), Positives = 368/516 (71%), Gaps = 6/516 (1%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE+L+ELA YL IKA FYD +D QFNQLVRQQIVVA++QQA+RDL+LR T D Sbjct: 145 VLAESLYELAGYLEIKAGFYDAGNDYEAQFNQLVRQQIVVAERQQAARDLVLRGNRTPHD 204 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLVQVHL ML+LYE +LST+ DY LRQ F V+ LR L + +D+E IAY ITR Sbjct: 205 GLLVQVHLRMLDLYEYILSTNTDYPLLRQTFAGTPVLDHLRGLVLQMCKDVEEIAYEITR 264 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 +AS TV Y+ LRAV+ E+ + + A+T L T + +R I L+ Q+H+A Sbjct: 265 GRASYATVEYRQGLRAVEAEVEQFRH---HHINPAAMTALVDTLDMMRGAITLVGQLHEA 321 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 ++ PV+P +LPGSDMTPFLT+QK++F++L NL+W SP FRF++R+++AV+ GLWIA Sbjct: 322 SRTPVEPARVLPGSDMTPFLTRQKYEFSVLRDNLKWSSPAFRFSLRISMAVSLGLWIAEH 381 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY+SH YWI+LTI++ILKPNFS TKQR DRLIGT+IGC++ + IL+ VH PL L VL Sbjct: 382 LPYVSHSYWILLTIIVILKPNFSMTKQRYNDRLIGTLIGCVVAVAILKVVHQPLILLGVL 441 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 F + VA+ AF IKYRYTAIAA +Q+L+ ++LL+P G V GERL+DT+IG +IA++FS Sbjct: 442 FLSLVASAAFVTIKYRYTAIAACIQVLIQIHLLMP-GSPTVAGERLVDTVIGGIIASLFS 500 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 +VLP+WEYR +PKL+ VL++++RY+ A+RD+L + +DDF YRV RK FMD+L+ALIS+ Sbjct: 501 FVLPSWEYRAIPKLVEGVLQANRRYIGATRDLLLRRTKDDFAYRVQRKQFMDNLSALISS 560 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA R+ +R+H + L IE+ Sbjct: 561 FQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYDELDIPAAEAAIEQATE 620 Query: 481 EASQHLAEAQRLLAPQPR--KRGGAVTVSPQAPQDK 514 AS L A L R RG S + P ++ Sbjct: 621 AASHSLQVASERLHADERGGGRGAGFIRSGKTPLER 656 >ref|YP_004687051.1| hypothetical protein CNE_1c32650 [Cupriavidus necator N-1] gb|AEI78570.1| hypothetical membrane protein [Cupriavidus necator N-1] Length = 798 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 278/539 (51%), Positives = 379/539 (70%), Gaps = 9/539 (1%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE+L+ELA YL IKA FYD +D QFNQLVRQQIVVA++QQA+RDL+LR T D Sbjct: 170 VLAESLYELAGYLEIKAGFYDAGNDYEAQFNQLVRQQIVVAERQQAARDLVLRGNRTPHD 229 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLVQVH+ ML+LYE +LST+ DY LRQ F V+ LR L + +D+E IAY +TR Sbjct: 230 GLLVQVHMRMLDLYEYILSTNTDYPLLRQTFAGTPVLDHLRGLVLQMCKDVEEIAYEVTR 289 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 +AS TV Y+ LRAV+ E+ +L + A+T L T + +R I L+ Q+H+A Sbjct: 290 GRASYATVEYRPGLRAVEAEIAQLRH---HHINPAAMTALVETLDMMRGAITLVGQLHEA 346 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 ++ PV+P +LPGSDMTPFLT+QK++F++L NL+W SP FRF++R+++AV+ GLWIA Sbjct: 347 SRTPVEPARVLPGSDMTPFLTRQKYEFSVLRDNLKWSSPAFRFSLRISMAVSLGLWIAEH 406 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 +PY+SH YWI+LTI++ILKPNFS TKQR DR+IGT+IGC++++ IL+ VH PL L VL Sbjct: 407 VPYVSHSYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCVVSVAILKVVHQPLILLGVL 466 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 F + VA+ AF IKYRYTAIAA +Q+L+ ++LL+P G V GERL+DT+IG +IA++FS Sbjct: 467 FLSLVASAAFVTIKYRYTAIAACIQVLIQIHLLMP-GSPTVAGERLVDTVIGGIIASLFS 525 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 +VLP+WEYR +PKL+ VL++++RY+ A+RD+L + +DDF YRV RK FMD+L+ALIS+ Sbjct: 526 FVLPSWEYRAIPKLVEGVLQANRRYIGATRDLLLRRTKDDFAYRVQRKQFMDNLSALISS 585 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+A+ R+ +R+H + L IE+ Sbjct: 586 FQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVASARIQVRQHYDELDIPAAEAAIEQATE 645 Query: 481 EASQHLAEAQRLLAPQPR--KRGGAVTVSPQAPQDKALSGKIELIGPLPPEPVPAEASA 537 AS L A L R RG S + P ++ + + P+ PAEA A Sbjct: 646 AASHSLQVASERLHADERGGGRGAGFIRSGKTPVERKAAAPAAVD---KPDETPAEAVA 701 >ref|YP_002006770.1| hypothetical protein RALTA_A2781 [Cupriavidus taiwanensis LMG 19424] emb|CAQ70709.1| conserved hypothetical protein, DUF893 COG1289; putative TRANSMEMBRANE PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 799 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 275/503 (54%), Positives = 364/503 (72%), Gaps = 6/503 (1%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE+L+ELA YL IKA FYD +D QFNQLVRQQIVVA++QQA+RDL+LR T D Sbjct: 170 VLAESLYELAGYLEIKAGFYDAGNDFEAQFNQLVRQQIVVAERQQAARDLVLRGNRTPHD 229 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLVQVHL ML+LYE +LST+ DY LRQ F V+ LR L + +D+E IAY +TR Sbjct: 230 GLLVQVHLRMLDLYEYILSTNTDYPMLRQTFAGTPVLDHLRGLVMQMCKDVEEIAYEVTR 289 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 + S TV Y+ LRAV+ E+AQ + A+T L T + +R I LI Q+H+A Sbjct: 290 GRGSYATVEYRPGLRAVE---AEIAQLRHHHINPAAMTALVETLDMMRGAITLIGQLHEA 346 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 ++ PV+P +LPGSDMTPFLT+QK++ ++L NL+W SP FRFA+RV++AV GLWIA + Sbjct: 347 SRTPVEPAKVLPGSDMTPFLTRQKYELSVLRDNLKWSSPAFRFALRVSMAVALGLWIAER 406 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY+SH YWI+LTI++ILKPNFS TKQR DR+IGT+IGC++++ IL+ VH PL L VL Sbjct: 407 LPYVSHSYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCVVSVAILKVVHQPLILLGVL 466 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 F + VA+ AF IKYRYTAIAA +Q+L+ ++LL+P G V GERL+DT+IG +IA++FS Sbjct: 467 FLSLVASAAFVTIKYRYTAIAACIQVLIQIHLLMP-GSPTVAGERLVDTVIGGIIASLFS 525 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 +VLP+WEYR +PKL+ VL++++RY+ A+RD+L + +DDF YRV RK FMD+L+ALIS+ Sbjct: 526 FVLPSWEYRAIPKLVEAVLQANRRYIAATRDLLLRRAKDDFAYRVQRKQFMDNLSALISS 585 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA R+ +R+H + L IE+ Sbjct: 586 FQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYDELDIPAAEAAIEQATE 645 Query: 481 EASQHLAEAQRLLAPQPRKRGGA 503 AS L A L +RGG Sbjct: 646 AASHSLQVASERL--HADERGGG 666 >ref|YP_585328.1| hypothetical protein Rmet_3187 [Cupriavidus metallidurans CH34] gb|ABF10059.1| conserved hypothetical protein; putative membrane protein [Cupriavidus metallidurans CH34] Length = 790 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 282/522 (54%), Positives = 378/522 (72%), Gaps = 13/522 (2%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 +LAE+L+E+A YL IKA FYD D FN+LVRQQIVVA++QQA+RD++LR T D Sbjct: 170 ILAESLYEMAAYLDIKAGFYDAGTDYDELFNRLVRQQIVVAERQQAARDMVLRGNKTPFD 229 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLV+VHL MLELYE +LST+ DY LRQ FG V+ LR L +D+E IAY ITR Sbjct: 230 GLLVRVHLRMLELYEYLLSTNTDYPLLRQTFGGTPVLDALRRLVRGLCKDLEEIAYDITR 289 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 + S +Y A+LRAV+ E+AQ S A+T L T++ IR + L+ Q+H+A Sbjct: 290 GRPSYSAHDYAADLRAVE---SEIAQLRHLNVSATAMTALVDTFDMIRGAVTLMGQLHEA 346 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 ++ PV+P +LPGSDMTPFLT+QK++ ++L +L W+SP FRFA+R+ LAV TGL++ Sbjct: 347 SRTPVEPAQVLPGSDMTPFLTRQKYELGVVLDSLNWRSPAFRFAVRITLAVGTGLFLGEH 406 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY SH YWI+LTIV+ILKPNFS TKQR DRLIGT+IGC+I++ IL ++H PL L VL Sbjct: 407 LPYASHSYWILLTIVVILKPNFSMTKQRYNDRLIGTLIGCIISVGILHWIHAPLVLLGVL 466 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 + A VA+ AF+ IKYRYTAIAA VQ+L+ +NLL+P G Q V+GERL+DT+IG +IA+VFS Sbjct: 467 YLALVASAAFSTIKYRYTAIAACVQVLIQINLLIP-GSQTVVGERLVDTVIGGIIASVFS 525 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 +VLP+WEYR +PKL+ NVL++++RY+ A+RD+L K QDDF YRV RK FMD+L+ALIS+ Sbjct: 526 FVLPSWEYRAIPKLVENVLQANRRYIAATRDLLLRKAQDDFAYRVQRKQFMDALSALISS 585 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRH--QENLPQAQVSRLIEET 478 RM+DEP ++QRAV L+RFIVQNYLVAAH+AA R+ +R+H + ++P A+ S IE+ Sbjct: 586 FQRMLDEPRSRQRAVDNLSRFIVQNYLVAAHVAAARIQVRQHYGELDVPAAEAS--IEQA 643 Query: 479 YLEASQHLAEAQRLLAPQPRK--RGGAVTVSPQAPQDKALSG 518 A + L A LA + R RG + P + A++G Sbjct: 644 TEAAVRSLTLASERLAGEERHGARGAGFI---RTPTEAAVAG 682 >ref|YP_297236.1| hypothetical protein Reut_A3032 [Ralstonia eutropha JMP134] gb|AAZ62392.1| Protein of unknown function DUF893, YccS/YhfK [Ralstonia eutropha JMP134] Length = 770 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 281/530 (53%), Positives = 376/530 (70%), Gaps = 8/530 (1%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 +LAE+L+E+ARYL +KA FYD +D QFN+LVRQQI+VA++QQA+RDL+LR T D Sbjct: 170 ILAESLYEMARYLEVKAAFYDAGNDYEAQFNRLVRQQIIVAERQQAARDLVLRGNRTPHD 229 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 GLLVQVHL ML+LYE +LST+ DY LRQ FG V+ L L +D+E IAY +TR Sbjct: 230 GLLVQVHLRMLDLYEYILSTNTDYPLLRQTFGSTPVLDHLHRLVMLMCKDVEEIAYEVTR 289 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 + S V+Y+ +LRAV+ E+AQ S A+T L T + IR I LI Q+H+A Sbjct: 290 GRPSYAAVDYRDDLRAVE---REIAQLRHHHISPAAMTALCETLDMIRGAITLIGQLHEA 346 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 ++ PV+P +LPG+DMTPFLT+QK++ +L NL+W++P FRFAIR+++AV GLWIA+ Sbjct: 347 SRTPVEPAKVLPGADMTPFLTRQKYELGVLRDNLKWRAPAFRFAIRISMAVALGLWIADH 406 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY SHGYWI+LTI++ILKPNFS TKQR DR+IGT+IGC+I++ IL+ PL L L Sbjct: 407 LPYASHGYWILLTIIVILKPNFSMTKQRYNDRVIGTLIGCIISVGILKVFDEPLVLLGFL 466 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 F A VA+ AF+ IKYRYTAIAA VQ+L+ +NLL+P Q GERL+DT+IG +IA++FS Sbjct: 467 FLALVASAAFSTIKYRYTAIAACVQVLIQINLLMP-NTQNAAGERLVDTVIGGIIASLFS 525 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 +VLP+WEYR +PKL+ VL++++RY+TA+RD+L + +DDF YRV RK FMD+L+ALI + Sbjct: 526 FVLPSWEYRAIPKLVEGVLQANRRYITATRDLLLRRAKDDFAYRVQRKQFMDALSALIGS 585 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA R+ +R+H L IE+ Sbjct: 586 FQRMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAARIQVRQHYTELDIPAAEAAIEQATD 645 Query: 481 EASQHLAEA-QRLLAPQPRKRGGAVTVSPQAPQDKALSGKIELIGPLPPE 529 A++ L A +RL A GA + P + Q +SG L GP PPE Sbjct: 646 AANRSLQLAIERLAADDRSGSRGAGFIRP-SEQVAIVSGP-SLEGP-PPE 692 >ref|YP_001900685.1| hypothetical protein Rpic_3131 [Ralstonia pickettii 12J] ref|ZP_07677701.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|ACD28253.1| protein of unknown function DUF893 YccS/YhfK [Ralstonia pickettii 12J] gb|EFP64082.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 738 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 256/502 (50%), Positives = 355/502 (70%), Gaps = 3/502 (0%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE L+ELA Y+ KA FYD D QFN LVRQQI VADKQQ +RD + RD T D Sbjct: 169 VLAECLYELAVYVECKAGFYDASKDFDEQFNALVRQQIAVADKQQVARDFVFRDNRTTSD 228 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 G LVQ+H+ ML++YE +LS++ DY LRQ DA+VM LRD+ + DIE +AYA+ R Sbjct: 229 GRLVQIHMRMLDIYEYLLSSNTDYPLLRQWLADAEVMRLLRDVIERLRMDIEGVAYAVGR 288 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 ++ S V+Y E+ A++ +HEL Q EA+ L + +R I L++Q+H A Sbjct: 289 DRPSPTPVSYDQEVAAIEGALHEL-QHNHHGVPIEAIAALEESVATVRGAIRLMAQLHAA 347 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 T PV+ +L DMTPFLT+QK++ ++L L W+SP+ RFA+R+++AV GLWIA+ Sbjct: 348 TATPVELSQVLLRPDMTPFLTRQKYELRLVLEELTWRSPVLRFALRISMAVAAGLWIADH 407 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY SHGYW++LTIV+ILKP FS T+QR DR++GT+IGC+I +ILR+ H+ + VL Sbjct: 408 LPYSSHGYWVLLTIVVILKPTFSMTRQRNFDRVLGTLIGCVIAAVILRYTHSTWILMGVL 467 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 + ++ A+ AF ++YRYTAIAA VQ+L+ +NLL+P G +G IGERL+DT+IG IAT FS Sbjct: 468 YLSTAASAAFVTVRYRYTAIAACVQVLIQINLLLP-GSKGAIGERLVDTLIGAAIATAFS 526 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 YVLP+WEYR+LPKL+ +VL++++R++ A+RD+L G ++DDF YRV RK FM+SL LI+A Sbjct: 527 YVLPSWEYRNLPKLVDDVLRTNRRFIEAARDLLLGSLKDDFVYRVQRKQFMESLTGLIAA 586 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA+R+++R+ + L +A L+E+T Sbjct: 587 FARMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAVRILVRQRAQELDEADTRALVEQTAE 646 Query: 481 EASQHLAEAQRLLAPQPRKRGG 502 A + LA AQ Q + GG Sbjct: 647 AALESLARAQERF-DQAVQEGG 667 >ref|YP_002982708.1| hypothetical protein Rpic12D_2765 [Ralstonia pickettii 12D] gb|ACS64036.1| protein of unknown function DUF893 YccS/YhfK [Ralstonia pickettii 12D] Length = 738 Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust. Identities = 251/490 (51%), Positives = 350/490 (71%), Gaps = 2/490 (0%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE L+ELA Y+ KA FYD D QFN LVRQQI VADKQQ +RD + RD T D Sbjct: 169 VLAECLYELAVYVECKAGFYDASKDFDEQFNALVRQQISVADKQQVARDFVFRDNRTTSD 228 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 G LVQ+H+ ML++YE +LS++ DY LRQ DA+VM LRD+ + DIE +AYA+ R Sbjct: 229 GRLVQIHMRMLDIYEYLLSSNTDYPLLRQWLADAEVMRLLRDVIERLRMDIEGVAYAVGR 288 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 ++ S V+Y E+ A++ +HEL Q EA+ L + +R I L++Q+H A Sbjct: 289 DRPSPTPVSYDQEVAAIEGALHEL-QHNHHGVPIEAIAALEESVATVRGAIRLMAQLHAA 347 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 T PV+ +L DMTPFLT+QK++ ++L L W+SP+ RFA+R+++AV GLWIA+ Sbjct: 348 TATPVELSQVLLRPDMTPFLTRQKYELRLVLEELTWRSPVLRFALRISMAVAAGLWIADH 407 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY SHGYW++LTIV+ILKP FS T+QR DR++GT+IGC+I +ILR+ H+ + VL Sbjct: 408 LPYSSHGYWVLLTIVVILKPTFSMTRQRNLDRVLGTLIGCVIAAVILRYTHSTWILMGVL 467 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 + ++ A+ AF ++YRYTAIAA VQ+L+ +NLL+P G +G IGERL+DT+IG IAT FS Sbjct: 468 YLSTAASAAFVTVRYRYTAIAACVQVLIQINLLLP-GSKGAIGERLVDTLIGAAIATAFS 526 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 YVLP+WEYR+LPKL+ +VL++++R++ A+RD+L G ++DDF YRV RK FM+SL LI+A Sbjct: 527 YVLPSWEYRNLPKLVDDVLRTNRRFIEAARDLLLGTLKDDFAYRVQRKQFMESLTGLIAA 586 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA+R+++R+ + L +A L+E+T Sbjct: 587 FARMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAVRILVRQWAQELDEADTRALVEQTAE 646 Query: 481 EASQHLAEAQ 490 A + L A+ Sbjct: 647 AALESLTRAK 656 >ref|YP_003744516.1| hypothetical protein RCFBP_10567 [Ralstonia solanacearum CFBP2957] emb|CBJ41872.1| conserved membrane protein of unknown function, DUF893 [Ralstonia solanacearum CFBP2957] Length = 737 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 249/490 (50%), Positives = 346/490 (70%), Gaps = 2/490 (0%) Query: 1 VLAEALFELARYLRIKAEFYDVRHDLAGQFNQLVRQQIVVADKQQASRDLILRDLYTKQD 60 VLAE L+ELA Y+ KA FYD D QFN LVRQQI VADKQQ +RD + RD D Sbjct: 169 VLAECLYELAVYVERKAGFYDTALDFDAQFNALVRQQISVADKQQVARDFVFRDNRGASD 228 Query: 61 GLLVQVHLSMLELYEQVLSTHADYAFLRQHFGDADVMVFLRDLANKAAQDIESIAYAITR 120 G LVQ+H+ ML+LYE +LST+ DY LRQ DAD+M LRD+ + D+E +AYA+ R Sbjct: 229 GRLVQIHMRMLDLYEYLLSTNTDYPLLRQWLADADIMRLLRDIIERMRLDLEVLAYAVGR 288 Query: 121 NKASEPTVNYKAELRAVQFEMHELAQPGPRQASEEALTILRVTYNKIRDIIELISQVHQA 180 ++ S ++Y E+ A+ + EL + G EA+ L + +R I L++Q+H A Sbjct: 289 DQPSPTPMSYDKEMAAIDAAVDEL-EHGHHAIPLEAIAALEESVATVRGAIRLMAQLHAA 347 Query: 181 TQNPVDPIPILPGSDMTPFLTQQKFKFNMLLVNLRWQSPIFRFAIRVALAVTTGLWIANQ 240 T V+ +L DMTPFLT+QK++ +++L W+SP+ RFA+R A+AV GLWIAN Sbjct: 348 TATQVELSSVLLRPDMTPFLTRQKYELSLVLEAFNWRSPVLRFALRTAMAVAAGLWIANH 407 Query: 241 LPYMSHGYWIVLTIVIILKPNFSATKQRMADRLIGTVIGCLITMLILRFVHNPLGQLAVL 300 LPY SHGYW++LTIV+ILKP FS T+QR DR++GT+IGC+I ++LR+VH+ L L Sbjct: 408 LPYASHGYWVLLTIVVILKPTFSMTRQRNVDRVLGTLIGCVIAAVLLRYVHSTWLLLGAL 467 Query: 301 FAASVAAPAFTYIKYRYTAIAASVQILMLLNLLVPAGHQGVIGERLIDTIIGVVIATVFS 360 + ++ A+ AF ++YRYTA AA+VQ+L+ +NLL+P G +G IGERL+DT+IG IAT FS Sbjct: 468 YLSTAASAAFVTVRYRYTAAAAAVQVLIQINLLLP-GSKGAIGERLVDTLIGAAIATAFS 526 Query: 361 YVLPAWEYRDLPKLLRNVLKSSQRYLTASRDMLEGKVQDDFFYRVCRKGFMDSLAALISA 420 YVLPAWEYR+LPKL+ +VL++++R++ ++RD+L G ++DDF YRV RK FMD+L LI+A Sbjct: 527 YVLPAWEYRNLPKLVDDVLRTNRRFIESARDLLLGSLKDDFAYRVQRKQFMDTLTGLIAA 586 Query: 421 LVRMMDEPATKQRAVRELNRFIVQNYLVAAHIAALRLMLRRHQENLPQAQVSRLIEETYL 480 RM+DEP ++ RAV LNRFIVQNYLVAAH+AA+R+++R+ + L +A LI +T Sbjct: 587 FARMLDEPKSRHRAVDNLNRFIVQNYLVAAHVAAVRILVRQRAQELDEADTRALIGQTVE 646 Query: 481 EASQHLAEAQ 490 A + LA A+ Sbjct: 647 AALESLARAK 656