BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0129.p (861 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspi... 1724 0.0 emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) ... 1721 0.0 ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]... 1521 0.0 ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC... 1499 0.0 ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subun... 1487 0.0 ref|YP_001100404.1| ATP-dependent protease Hsp 100 [Herminiimona... 1481 0.0 ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subuni... 1391 0.0 ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subuni... 1385 0.0 ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]... 1381 0.0 ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia mu... 1379 0.0 >ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae SmR1] gb|ADJ63610.1| ATP-dependent Clp protease subunit (heat-shock) protein [Herbaspirillum seropedicae SmR1] Length = 861 Score = 1724 bits (4466), Expect = 0.0, Method: Compositional matrix adjust. Identities = 861/861 (100%), Positives = 861/861 (100%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS Sbjct: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK Sbjct: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG Sbjct: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 KFGPKDVVRVDVDHGQLSFSK Sbjct: 841 KFGPKDVVRVDVDHGQLSFSK 861 >emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) protein [Herbaspirillum seropedicae] Length = 861 Score = 1721 bits (4457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 859/861 (99%), Positives = 859/861 (99%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL Sbjct: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS Sbjct: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV Sbjct: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAG AEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGYAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALAR ELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARAELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE Sbjct: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE Sbjct: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS Sbjct: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK Sbjct: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG Sbjct: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 KFGPKDVVRVDVDHGQLSFSK Sbjct: 841 KFGPKDVVRVDVDHGQLSFSK 861 >ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331] gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331] Length = 867 Score = 1521 bits (3938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 747/863 (86%), Positives = 812/863 (94%), Gaps = 4/863 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MR DKLTTKLQEA+ADAQSQAVG+DNQYI+PVH ++ALLNQ+DG A SLLQRAGVNV L Sbjct: 1 MRFDKLTTKLQEAIADAQSQAVGNDNQYIDPVHALIALLNQDDGSATSLLQRAGVNVAAL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 L+AA++RLP+VSG GGEVQ+GREL+ALLNLADKEAQK GDQF+ASEM+LL L+DDKS Sbjct: 61 ETGLKAALERLPKVSGAGGEVQIGRELLALLNLADKEAQKRGDQFIASEMLLLALLDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAGR ARENGLTRK+LEAAITAVRGGA+V+SQ EGQREALKKYTLDLTERAR GKLDPV Sbjct: 121 DAGRLARENGLTRKALEAAITAVRGGANVASQDGEGQREALKKYTLDLTERARLGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAK+RGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKFRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGV+ITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA+KIKIEIDSKPEVMDKLDRRLI Sbjct: 361 HGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAV+REKDEASQKR LIEEEIEKL REYADLEEIWK+EK+SAQG + LKEEIE Sbjct: 421 QLKIEREAVRREKDEASQKRFSLIEEEIEKLSREYADLEEIWKSEKASAQGSKHLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTE----KPKLVRTQV 536 K+RLQ++EATR SDWQKVSELKYGKL ELE ALE Q+++DA +P+LVRTQV Sbjct: 481 KLRLQIDEATRNSDWQKVSELKYGKLNELEKALETQSRQDALAAAHPDPDGRPQLVRTQV 540 Query: 537 GAEEIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGL 596 GA+EIAEIV+RATGIPVS+M+QGER+KL+ MED LH+RVVGQ+EAIVAVSDAIRRSRAGL Sbjct: 541 GADEIAEIVSRATGIPVSKMLQGERDKLVKMEDELHKRVVGQNEAIVAVSDAIRRSRAGL 600 Query: 597 GDPSKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPP 656 DP +PYGSFMFLGPTGVGKTELCKALA +LFD+ +A+IRIDMSEFMEKHSVARLIGAPP Sbjct: 601 SDPDRPYGSFMFLGPTGVGKTELCKALAGFLFDSTDALIRIDMSEFMEKHSVARLIGAPP 660 Query: 657 GYVGYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN 716 GYVGYEEGGYLTE VRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN Sbjct: 661 GYVGYEEGGYLTELVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKN 720 Query: 717 TVIVMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIG 776 TVIVMTSNLGSH+IQ+ME SDPA+VK+ VMAEVR HFRPEFINR+DEIVVFHALD KNIG Sbjct: 721 TVIVMTSNLGSHRIQAMEGSDPAVVKMEVMAEVRNHFRPEFINRIDEIVVFHALDEKNIG 780 Query: 777 AIAKIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQ 836 +IAKIQL+ILEQRLAK+++GL ISEAGLQKIAEAGFDPVYGARPLKRAIQQ+IENPLSK Sbjct: 781 SIAKIQLKILEQRLAKMDMGLVISEAGLQKIAEAGFDPVYGARPLKRAIQQQIENPLSKL 840 Query: 837 ILAGKFGPKDVVRVDVDHGQLSF 859 IL GKFGPKD+V ++V++G++ F Sbjct: 841 ILEGKFGPKDIVHINVNNGEIVF 863 >ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30751.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480] Length = 867 Score = 1499 bits (3882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 730/862 (84%), Positives = 812/862 (94%), Gaps = 1/862 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEAL+DAQS AVG+DN YIEP HL++ALLNQ+DGGA SLLQRAG N+ GL Sbjct: 1 MRLDKLTTKLQEALSDAQSLAVGNDNPYIEPAHLLVALLNQDDGGASSLLQRAGANIGGL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 +AAL++A++RLP+VSG GGEVQVGREL ALLN+ADKEAQK GDQF+ASEMVLLGL DDKS Sbjct: 61 TAALKSALERLPKVSGTGGEVQVGRELGALLNVADKEAQKRGDQFIASEMVLLGLTDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+AARENGLTRK+LEAAI AVRGGASV+S EGQREAL KYT+DLTERAR GKLDPV Sbjct: 121 EAGKAARENGLTRKALEAAIEAVRGGASVNSADSEGQREALAKYTIDLTERARLGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAAL+AGAKYRGEFEERLKAVLK++A+DEGQTIVFIDELHTMVGAGKA+GAMDAGNMLK Sbjct: 241 DMAALVAGAKYRGEFEERLKAVLKDLAKDEGQTIVFIDELHTMVGAGKADGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKILV EPSVEATIAILRGLQE+YEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKILVAEPSVEATIAILRGLQERYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA+K+KIEIDS+PEVMDKLDRR I Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKVKIEIDSRPEVMDKLDRRTI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREA+K+EKDEASQ+RL LIEEEI + EREYADLEEIW+AEK++ QG Q +KEEIE Sbjct: 421 QLKIEREAIKKEKDEASQRRLALIEEEILRSEREYADLEEIWRAEKAAVQGSQHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTE-KPKLVRTQVGAE 539 +VRLQM+EATRKSDW+ VSEL+YGKL ELE ALE Q+++D K KP+L+RTQVGAE Sbjct: 481 EVRLQMDEATRKSDWKTVSELQYGKLPELEKALEAQSRQDEQADKANTKPRLLRTQVGAE 540 Query: 540 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 599 EIAEIV+RATGIPVS+MMQGER+KL+HMED LH+RV+GQ EAIVAVSDAIRRSRAGL DP Sbjct: 541 EIAEIVSRATGIPVSKMMQGERDKLVHMEDFLHQRVIGQHEAIVAVSDAIRRSRAGLSDP 600 Query: 600 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 659 ++PYGSFMFLGPTGVGKTELCKALA +LFDTEE+MIRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 601 NRPYGSFMFLGPTGVGKTELCKALAGFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYV 660 Query: 660 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 719 GY+EGG+LTEAVRR+PYSVILLDE+EKAH DVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 661 GYDEGGFLTEAVRRRPYSVILLDEVEKAHQDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 Query: 720 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 779 VMTSNLGSHKIQ+ME+S+PA+VK+AVMAEVR HFRPEFINR+DEIVVFHALD K+IGAIA Sbjct: 721 VMTSNLGSHKIQAMEESEPAVVKMAVMAEVRQHFRPEFINRIDEIVVFHALDEKHIGAIA 780 Query: 780 KIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 839 +IQL+ILEQRL K+E+ L+I++A LQKIAEAGFDPVYGARPLKRAIQQ+IENPLSKQIL Sbjct: 781 RIQLKILEQRLGKMEMRLDITDAALQKIAEAGFDPVYGARPLKRAIQQQIENPLSKQILE 840 Query: 840 GKFGPKDVVRVDVDHGQLSFSK 861 GK+GPKD++ +DV G+L+F K Sbjct: 841 GKYGPKDLILIDVVSGELTFGK 862 >ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Janthinobacterium sp. Marseille] gb|ABR88285.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Janthinobacterium sp. Marseille] Length = 859 Score = 1487 bits (3850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 723/861 (83%), Positives = 799/861 (92%), Gaps = 3/861 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQS AVG+DNQYIEPVH+++ALL+Q+D RSLLQRAG N+NG+ Sbjct: 1 MRLDKLTTKLQEALADAQSHAVGNDNQYIEPVHVLVALLSQDDSSTRSLLQRAGANINGM 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 + AL++A+ RLP+VSG GGEVQ+GR+L +LLNLADKE+Q HGDQF+A+EMVLL L +DKS Sbjct: 61 TTALRSALDRLPKVSGTGGEVQIGRDLSSLLNLADKESQMHGDQFIATEMVLLALTEDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+ ARENGLTRK+LEAAI AVRG + V S EGQREALKKYTLDLTERAR GKLDPV Sbjct: 121 EAGKIARENGLTRKALEAAIKAVRGSSKVDSADGEGQREALKKYTLDLTERARIGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLK KRVLSL Sbjct: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMA+LLAGAKYRGEFEERLKAVL E+A+DEGQTIVFIDE+HT+VGAGKAEGAMDAGNMLK Sbjct: 241 DMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKI+V EP+VEATIAILRGLQEKYE+H Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVAEPTVEATIAILRGLQEKYELH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIE+DSKPEVMDKLDRR+I Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRVI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREA+K+EKDEASQKRL LIEEEIE+L REYADLEEIWKAEKSSAQG Q +KEEIE Sbjct: 421 QLKIEREAIKKEKDEASQKRLALIEEEIERLGREYADLEEIWKAEKSSAQGSQHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 KVRLQMEEATRKSDWQ+VSEL+Y L +LEA L+ K + V KP+LVRTQVGAEE Sbjct: 481 KVRLQMEEATRKSDWQRVSELQYSTLPQLEAQLKNAVKGE---VSAGKPQLVRTQVGAEE 537 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAE+V+RATGIPVSRMM GEREKLL MED LH+RVVGQ EAIVAVSDAIRRSRAGLGDP Sbjct: 538 IAEVVSRATGIPVSRMMTGEREKLLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPD 597 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 +PYGSFMFLGPTGVGKTELCKALAS++FDTE+++IRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 598 RPYGSFMFLGPTGVGKTELCKALASFMFDTEDSLIRIDMSEFMEKHSVARLIGAPPGYVG 657 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPY VILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 658 YEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 717 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQSME ++PAL+K+AVMAEV+ HFRPEFINR+DEIV FHALD KNIG+IAK Sbjct: 718 MTSNLGSHKIQSMEGNEPALIKMAVMAEVQGHFRPEFINRIDEIVAFHALDEKNIGSIAK 777 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQL++LE+RLA++++ +++SE LQKIAEAGFDPVYGARPLKRAIQ +IENPLSK IL G Sbjct: 778 IQLQVLEKRLARMDMSMDVSEDALQKIAEAGFDPVYGARPLKRAIQHQIENPLSKAILEG 837 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 KFGPKDV+ +DV G+L F+K Sbjct: 838 KFGPKDVISLDVQDGELVFTK 858 >ref|YP_001100404.1| ATP-dependent protease Hsp 100 [Herminiimonas arsenicoxydans] emb|CAL62281.1| Chaperone protein ClpB [Herminiimonas arsenicoxydans] Length = 860 Score = 1481 bits (3834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/861 (83%), Positives = 800/861 (92%), Gaps = 3/861 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MRLDKLTTKLQEALADAQS AVG+DNQYIEPVH+++ALL+Q+D RSLLQRAG N+NG+ Sbjct: 1 MRLDKLTTKLQEALADAQSHAVGNDNQYIEPVHVLVALLSQDDSSTRSLLQRAGANINGM 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 AL++A++RLP+VSG GG+VQ+ R+L ALLNLADKE+Q HGD+F+A+EM+LL L +DKS Sbjct: 61 VTALKSALERLPKVSGTGGQVQISRDLTALLNLADKESQMHGDEFIATEMLLLALTEDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+ ARENGLTRK+L+AAI AVRG + V S + EGQREALKKYT+DLTERAR GKLDPV Sbjct: 121 EAGKIARENGLTRKALQAAIKAVRGSSKVDSAEGEGQREALKKYTMDLTERARIGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRR IQ+LQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVP+SLK KRVLSL Sbjct: 181 IGRDDEIRRTIQILQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMA+LLAGAKYRGEFEERLKAVL E+A+DEGQTIVFIDE+HT+VGAGKAEGAMDAGNMLK Sbjct: 241 DMASLLAGAKYRGEFEERLKAVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQK+LVDEP+VEATIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAA+KIKIEIDSKPEVMD+LDRR+I Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLDRRVI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREA+++EKDEASQKRL LIEEEIEKL REYADLEEIWKAEKS+AQG Q +KE IE Sbjct: 421 QLKIEREAIRKEKDEASQKRLALIEEEIEKLGREYADLEEIWKAEKSAAQGSQHIKEAIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 K RLQMEEATR+SDWQ+VSEL+Y L ELEA L+ +A+ KP+LVRTQVGAEE Sbjct: 481 KARLQMEEATRQSDWQRVSELQYKTLPELEAQLKNAVTGEASA---GKPQLVRTQVGAEE 537 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAE+V+RATGIPVSRMMQGEREKLL MED LH+RVVGQ EAIVAVSDAIRRSRAGLGDP Sbjct: 538 IAEVVSRATGIPVSRMMQGEREKLLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPD 597 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 +PYGSFMFLGPTGVGKTELCKALAS+LFDTE++++RIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 598 RPYGSFMFLGPTGVGKTELCKALASFLFDTEDSLVRIDMSEFMEKHSVARLIGAPPGYVG 657 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPY VILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 658 YEEGGYLTEAVRRKPYCVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 717 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSHKIQ+ME ++PAL+K+AVMAEV++HFRPEFINR+DEIVVFHALD KNIGAIAK Sbjct: 718 MTSNLGSHKIQAMEGNEPALIKMAVMAEVQSHFRPEFINRIDEIVVFHALDEKNIGAIAK 777 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQL LEQRLA++++ +++SE LQKIAEAGFDPVYGARPLKRAIQQ+IENPLSK IL G Sbjct: 778 IQLHTLEQRLARMDMSMDVSEDALQKIAEAGFDPVYGARPLKRAIQQQIENPLSKAILEG 837 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 KFGPKDV+ VDV +G+L F+K Sbjct: 838 KFGPKDVISVDVKNGELEFAK 858 >ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter formigenes OXCC13] gb|EEO30078.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter formigenes OXCC13] Length = 864 Score = 1391 bits (3601), Expect = 0.0, Method: Compositional matrix adjust. Identities = 695/861 (80%), Positives = 780/861 (90%), Gaps = 1/861 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MR DKLTTKLQEA+ADA S AVG+DNQY++PVHL+ ALL Q+DG A+SLLQRAGVNVN L Sbjct: 1 MRQDKLTTKLQEAIADAHSMAVGNDNQYVDPVHLVSALLRQDDGSAKSLLQRAGVNVNKL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 +++L +AV RLP+VSG GG+VQ+GREL+ +LNLADKEAQK DQF+ASEM+LL L+DDKS Sbjct: 61 ASSLNSAVDRLPKVSGTGGDVQIGRELMNVLNLADKEAQKRNDQFIASEMILLALLDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AGR ARE+GL+R +LEAAI AVRG +V+S EGQREALKKYTLDLTERAR GKLDPV Sbjct: 121 EAGRLARESGLSRSALEAAIKAVRGDTNVNSADAEGQREALKKYTLDLTERARQGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVN EVP+SLK KRVL+L Sbjct: 181 IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLKGKRVLAL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAK+RGEFEERLKAVL E+A+DEGQ IVFIDE+HTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKI+VDEP+VE TIAILRGLQEKYE+H Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKIMVDEPTVEDTIAILRGLQEKYELH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGV+ITDPAI+AAAELS RYITDRFLPDKAIDLIDEAAS+IK+EIDSKPEVMDKLDRR+I Sbjct: 361 HGVEITDPAIIAAAELSQRYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRII 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVK+E DEAS KRL LIEEEI KLE+EYAD +EI KAEK+ +G + +KEEIE Sbjct: 421 QLKIEREAVKKETDEASLKRLALIEEEINKLEKEYADYDEILKAEKAGVEGSKHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 KVRL+M+EA R+ D+QK+SEL YGKL ELE AL ++K+ ++T+ PKL+RT V AEE Sbjct: 481 KVRLEMDEAKRRGDFQKMSELMYGKLPELEKALAADDQKETK-LETDHPKLLRTHVDAEE 539 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAE+V+RATGIPVS+MMQGER+KLLHMED LH+RVVGQ EAIVAVS+AIRRSRAGL DP+ Sbjct: 540 IAEVVSRATGIPVSKMMQGERDKLLHMEDYLHKRVVGQHEAIVAVSEAIRRSRAGLSDPN 599 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 +PYGSFMFLGPTGVGKTELCKALAS+LFDTE+AMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 600 RPYGSFMFLGPTGVGKTELCKALASFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVG 659 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 660 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 719 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGSH IQSM S+ LVK+AVM EVR HFRPEFINRVDEIVVFHALD KNIGAIAK Sbjct: 720 MTSNLGSHLIQSMTGSEQDLVKVAVMDEVRKHFRPEFINRVDEIVVFHALDEKNIGAIAK 779 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQL +L +RL K+E+ L++SE L KIAEAGFDP++GARPLKRAIQ +IENP+SK IL G Sbjct: 780 IQLELLNKRLEKMEMSLDVSEKALHKIAEAGFDPLFGARPLKRAIQNQIENPISKYILEG 839 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 +GPKDV+ VD G+L F K Sbjct: 840 YYGPKDVIVVDEKDGKLEFEK 860 >ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter formigenes HOxBLS] gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter formigenes HOxBLS] Length = 864 Score = 1385 bits (3584), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/861 (80%), Positives = 780/861 (90%), Gaps = 1/861 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MR DKLTTKLQEA+ADA S AVG+DNQYI+PVHL+ ALL Q DG +SLLQRAGVNVN L Sbjct: 1 MRQDKLTTKLQEAIADAHSLAVGNDNQYIDPVHLLTALLQQNDGSTKSLLQRAGVNVNKL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 + AL+ AV RLP+V+G GG+VQ+GREL+ +LNLAD+EAQK DQF+ASEM+LL L+DDKS Sbjct: 61 AGALKTAVDRLPKVTGTGGDVQIGRELMNVLNLADREAQKRNDQFIASEMILLALLDDKS 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AGR ARE GL+R +LEAAI AVRG A+V+S EGQREALKKYT+DLTERAR GKLDPV Sbjct: 121 EAGRLAREAGLSRSALEAAIKAVRGDANVNSADAEGQREALKKYTMDLTERARQGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRRAIQVLQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVN EVP+SLK KRVL+L Sbjct: 181 IGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNNEVPESLKGKRVLAL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAK+RGEFEERLKAVL E+A+DEGQ IVFIDE+HTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKFRGEFEERLKAVLNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PALARGELHCVGATTLDEYR+YIEKDAALERRFQKI+VDEPSVE TIAILRGLQEKYEVH Sbjct: 301 PALARGELHCVGATTLDEYRKYIEKDAALERRFQKIMVDEPSVEDTIAILRGLQEKYEVH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGV+I+DPAI+AAAELSHRYITDRFLPDKAIDLIDEAAS+IK+EIDSKPEVMD+LDRR+I Sbjct: 361 HGVEISDPAIIAAAELSHRYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRRII 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVK+E DEAS+KRL L+EEEI KLE+EYAD +EI KAEK+ +G + +KEEIE Sbjct: 421 QLKIEREAVKKETDEASRKRLALLEEEIAKLEKEYADYDEILKAEKAGVEGSKHIKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAALEVQNKKDAAGVKTEKPKLVRTQVGAEE 540 K+RLQ+EEA R+ D+QK+SEL YG+L ELE AL ++N KDA ++ P+L+RT+V AEE Sbjct: 481 KIRLQIEEAKRRGDYQKMSELMYGRLPELEKALAMENDKDAR-LEHAHPRLLRTEVDAEE 539 Query: 541 IAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPS 600 IAE+V+RATGIPVS+MMQGER+KLLHMED LH+RVVGQ EAIVAVS+AIRRSRAGL DP+ Sbjct: 540 IAEVVSRATGIPVSKMMQGERDKLLHMEDELHKRVVGQHEAIVAVSEAIRRSRAGLSDPN 599 Query: 601 KPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVG 660 +PYGSFMFLGPTGVGKTELCKALA +LFDTE+AMIRIDMSEFMEKHSVARLIGAPPGYVG Sbjct: 600 RPYGSFMFLGPTGVGKTELCKALAGFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVG 659 Query: 661 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 720 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV Sbjct: 660 YEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV 719 Query: 721 MTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAK 780 MTSNLGS IQSM SD LVK+AVM EVR HFRPEFINRVDEIVVFHALD KNIGAIA+ Sbjct: 720 MTSNLGSQLIQSMGGSDQGLVKMAVMEEVRKHFRPEFINRVDEIVVFHALDEKNIGAIAR 779 Query: 781 IQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILAG 840 IQL ++ +RL K+++ +E+S+A L KIAEAGFDP++GARPLKRAIQ +IENP+SK IL G Sbjct: 780 IQLELVNRRLQKMDMSMEVSDAALHKIAEAGFDPLFGARPLKRAIQNQIENPISKYILEG 839 Query: 841 KFGPKDVVRVDVDHGQLSFSK 861 ++GPKDV+ VD G+L F K Sbjct: 840 RYGPKDVIVVDEKDGELVFDK 860 >ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054] ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424] gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054] gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424] Length = 865 Score = 1381 bits (3575), Expect = 0.0, Method: Compositional matrix adjust. Identities = 679/862 (78%), Positives = 766/862 (88%), Gaps = 1/862 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MR+DKLTTK QEALADAQS A G DNQYIEPVH++ AL+ Q+DG ARSL+ RAGV+V L Sbjct: 1 MRIDKLTTKFQEALADAQSLAAGRDNQYIEPVHVLAALVAQQDGSARSLMSRAGVHVQAL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 AL A+ RLPQV+G GG++Q+GREL LLN ADKEAQK D F+ASEM LL + DDK Sbjct: 61 QGALNEAISRLPQVTGTGGDIQIGRELAGLLNQADKEAQKLNDTFIASEMFLLAVSDDKG 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 DAG+ AR++GLTRKSLEAAI AVRGG+ V SQ E QREALKKYT+DLTERARAGKLDPV Sbjct: 121 DAGKLARQHGLTRKSLEAAIAAVRGGSQVHSQDAESQREALKKYTVDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVP++LK KRVLSL Sbjct: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVL +IA+DEGQTIVFIDE+HTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PAL+RGELHC+GATTLDEYR+YIEKDAALERRFQK+LVDEPSVEATIAILRGLQEKYE+H Sbjct: 301 PALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIK+EIDSKPE MDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVK+E+DEASQKRLQLIEEEI++L REYADLEEIW AEK++ QG QLKEEIE Sbjct: 421 QLKIEREAVKKEQDEASQKRLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAAL-EVQNKKDAAGVKTEKPKLVRTQVGAE 539 KVR + R+ +KV+EL+YGKL +LEA L +V ++ +P+L+RTQVGAE Sbjct: 481 KVRADIARLQREGKLEKVAELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAE 540 Query: 540 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 599 EIAE+V+R+TGIPVSRMMQGEREKLLH+E+ LHERVVGQDEAI AV+DAIRRSRAGL DP Sbjct: 541 EIAEVVSRSTGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADP 600 Query: 600 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 659 ++PYGSF+FLGPTGVGKTELCKALAS+LFD+EE +IRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 601 NRPYGSFLFLGPTGVGKTELCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYV 660 Query: 660 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 719 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 Query: 720 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 779 VMTSNLGS IQ+M + +K AV EV+ HFRPEF+NR+D++VVFHALD NI +IA Sbjct: 721 VMTSNLGSQVIQAMTGAPQDEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIA 780 Query: 780 KIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 839 KIQL L RLAKL++ L++S A L++IA+ G+DPV+GARPLKRAIQQEIENP++K ILA Sbjct: 781 KIQLARLHDRLAKLDMALDVSPAALEQIAKVGYDPVFGARPLKRAIQQEIENPVAKLILA 840 Query: 840 GKFGPKDVVRVDVDHGQLSFSK 861 G+FGPKDV+ VDV+ GQ F + Sbjct: 841 GRFGPKDVIPVDVNDGQFVFDR 862 >ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M] ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2] ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1] gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1] gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2] gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M] Length = 865 Score = 1379 bits (3570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 679/862 (78%), Positives = 765/862 (88%), Gaps = 1/862 (0%) Query: 1 MRLDKLTTKLQEALADAQSQAVGHDNQYIEPVHLILALLNQEDGGARSLLQRAGVNVNGL 60 MR+DKLTTK QEALADAQS A G DNQYIEPVH++ ALL Q+DG ARSL+ RAGV+V L Sbjct: 1 MRIDKLTTKFQEALADAQSLAAGRDNQYIEPVHVLAALLAQQDGSARSLMSRAGVHVQAL 60 Query: 61 SAALQAAVKRLPQVSGNGGEVQVGRELVALLNLADKEAQKHGDQFVASEMVLLGLVDDKS 120 AL A+ RLPQV+G GG++Q+GREL LLN ADKEAQK D F+ASEM LL + DDK Sbjct: 61 QGALNDAIARLPQVTGTGGDIQIGRELAGLLNQADKEAQKLNDTFIASEMFLLAVADDKG 120 Query: 121 DAGRAARENGLTRKSLEAAITAVRGGASVSSQQDEGQREALKKYTLDLTERARAGKLDPV 180 +AG+ AR++GLTRK+LEAAI AVRGG+ V SQ E QREALKKYT+DLTERARAGKLDPV Sbjct: 121 EAGKLARQHGLTRKALEAAIAAVRGGSQVHSQDAESQREALKKYTVDLTERARAGKLDPV 180 Query: 181 IGRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSL 240 IGRDDEIRR+IQ+LQRR+KNNPVLIGEPGVGKTAIVEGLAQRIVNGEVP++LK KRVLSL Sbjct: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240 Query: 241 DMAALLAGAKYRGEFEERLKAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLK 300 DMAALLAGAKYRGEFEERLKAVL +IA+DEGQTIVFIDE+HTMVGAGKAEGAMDAGNMLK Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300 Query: 301 PALARGELHCVGATTLDEYRQYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVH 360 PAL+RGELHC+GATTLDEYR+YIEKDAALERRFQK+LVDEPSVEATIAILRGLQEKYE+H Sbjct: 301 PALSRGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELH 360 Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLI 420 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIK+EIDSKPE MDKLDRRLI Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLI 420 Query: 421 QLKIEREAVKREKDEASQKRLQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIE 480 QLKIEREAVK+E+DEASQKRLQLIEEEIE+L REYADLEEIW AEK++ QG QLKEEIE Sbjct: 421 QLKIEREAVKKEQDEASQKRLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIE 480 Query: 481 KVRLQMEEATRKSDWQKVSELKYGKLAELEAAL-EVQNKKDAAGVKTEKPKLVRTQVGAE 539 KVR + R+ +KV+EL+YGKL +LEA L +V ++ +P+L+RTQVGAE Sbjct: 481 KVRADIARLQREGKLEKVAELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAE 540 Query: 540 EIAEIVARATGIPVSRMMQGEREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDP 599 EIAE+V+RATGIPVSRMMQGEREKLLH+E+ LHERVVGQDEAI AV+DAIRRSRAGL DP Sbjct: 541 EIAEVVSRATGIPVSRMMQGEREKLLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADP 600 Query: 600 SKPYGSFMFLGPTGVGKTELCKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYV 659 ++PYGSF+FLGPTGVGKTELCKALAS+LFD+EE +IRIDMSEFMEKHSVARLIGAPPGYV Sbjct: 601 NRPYGSFLFLGPTGVGKTELCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYV 660 Query: 660 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 719 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI Sbjct: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720 Query: 720 VMTSNLGSHKIQSMEDSDPALVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIA 779 VMTSNLGS IQSM S +K AV EV+ HFRPEF+NR+D++VVFH LD NI +IA Sbjct: 721 VMTSNLGSQVIQSMTGSPQDEIKDAVWLEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIA 780 Query: 780 KIQLRILEQRLAKLEIGLEISEAGLQKIAEAGFDPVYGARPLKRAIQQEIENPLSKQILA 839 KIQL L RLAKL++ L++S A L++IA+ G+DP++GARPLKRAIQQEIENP++K ILA Sbjct: 781 KIQLARLHDRLAKLDMALDVSPAALEQIAKVGYDPLFGARPLKRAIQQEIENPVAKLILA 840 Query: 840 GKFGPKDVVRVDVDHGQLSFSK 861 G+FGPKDV+ VDV+ G+ F + Sbjct: 841 GRFGPKDVIPVDVNDGKFVFDR 862