BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0114.p (186 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774443.1| sugar ABC transporter periplasmic protein [H... 376 e-103 ref|YP_004752841.1| ABC sugar transporter, periplasmic ligand bi... 351 3e-95 ref|YP_004153409.1| periplasmic binding protein/laci transcripti... 333 6e-90 ref|YP_001860813.1| periplasmic binding protein/LacI transcripti... 291 2e-77 ref|YP_001888921.1| periplasmic binding protein/LacI transcripti... 289 1e-76 ref|YP_004228076.1| periplasmic-binding protein/LacI transcripti... 288 2e-76 ref|ZP_06838954.1| periplasmic binding protein/LacI transcriptio... 288 2e-76 ref|YP_553911.1| sugar ABC transporter periplasmic ligand bindin... 288 2e-76 ref|YP_003907060.1| periplasmic-binding protein/LacI transcripti... 288 4e-76 ref|YP_556480.1| ABC sugar transporter, periplasmic ligand bindi... 286 1e-75 >ref|YP_003774443.1| sugar ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ62535.1| ABC-type sugar transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 335 Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/186 (100%), Positives = 186/186 (100%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI Sbjct: 150 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 209 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW Sbjct: 210 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 269 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN Sbjct: 270 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 329 Query: 181 YKQYAF 186 YKQYAF Sbjct: 330 YKQYAF 335 >ref|YP_004752841.1| ABC sugar transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] gb|AEK62018.1| ABC sugar transporter, periplasmic ligand binding protein [Collimonas fungivorans Ter331] Length = 336 Score = 351 bits (901), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 171/186 (91%), Positives = 179/186 (96%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 MGQ GKWSSLVGSLGSQSQVQWADGGA+NAAKKYP MTLVDAKNESANDAEKAY+KAKEI Sbjct: 151 MGQKGKWSSLVGSLGSQSQVQWADGGASNAAKKYPGMTLVDAKNESANDAEKAYSKAKEI 210 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGK+CVYGTGLPSEAAKFLESGAVGGIAFW Sbjct: 211 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKICVYGTGLPSEAAKFLESGAVGGIAFW 270 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPKDAG+ MNKAA+MLVQGKKITDGMD+G+ GYNKV VKKGPG GVIVTGQAWVEVDK N Sbjct: 271 DPKDAGIMMNKAAVMLVQGKKITDGMDMGVSGYNKVAVKKGPGAGVIVTGQAWVEVDKSN 330 Query: 181 YKQYAF 186 YK+YAF Sbjct: 331 YKKYAF 336 >ref|YP_004153409.1| periplasmic binding protein/laci transcriptional regulator [Variovorax paradoxus EPS] gb|ADU35298.1| periplasmic binding protein/LacI transcriptional regulator [Variovorax paradoxus EPS] Length = 334 Score = 333 bits (855), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 164/186 (88%), Positives = 174/186 (93%), Gaps = 1/186 (0%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 MGQ GKW+SLVGSLGSQSQVQWADGGA NA KKYPKM LVDAKNES NDAEKAY KAKE+ Sbjct: 150 MGQQGKWTSLVGSLGSQSQVQWADGGANNA-KKYPKMQLVDAKNESLNDAEKAYGKAKEM 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPKDAG+ MNKAA ML+ GK ITDG D+G+ GYNKV+VKKGPGVGVIVTGQAWVEVDK+N Sbjct: 269 DPKDAGIVMNKAAKMLLDGKTITDGTDMGVQGYNKVSVKKGPGVGVIVTGQAWVEVDKQN 328 Query: 181 YKQYAF 186 YK+YAF Sbjct: 329 YKKYAF 334 >ref|YP_001860813.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia phymatum STM815] gb|ACC73767.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia phymatum STM815] Length = 334 Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 143/186 (76%), Positives = 155/186 (83%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M Q GKW+ LVGSLGS+SQVQWADGG NA KY KM LV+ K E+ ND EKAY AKE+ Sbjct: 149 MHQDGKWAVLVGSLGSRSQVQWADGGINNAKAKYAKMNLVEPKLETNNDGEKAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAGLQGK+CVYGTGLP+EA KFLESGAV GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGLQGKICVYGTGLPTEAGKFLESGAVNGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AGLAMNK A MLV GK + +G DLGIPGY KVTV+KGPG GVIV GQ WV VDK N Sbjct: 269 DPKLAGLAMNKVAQMLVDGKTVQNGADLGIPGYTKVTVEKGPGKGVIVRGQGWVNVDKSN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYNF 334 >ref|YP_001888921.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia phytofirmans PsJN] gb|ACD19551.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia phytofirmans PsJN] Length = 334 Score = 289 bits (740), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 138/186 (74%), Positives = 154/186 (82%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M GKW+ LVGSLGS+SQVQWADGG NA KYPKM LV+ K E+ ND E+AY AKE+ Sbjct: 149 MHDDGKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMNLVEPKLETNNDGERAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAINGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AG+AMNK A MLV GK + +G DLGIPGY KVTV KGPG G+IV GQ WV VDK N Sbjct: 269 DPKLAGIAMNKVAQMLVDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWVNVDKSN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYPF 334 >ref|YP_004228076.1| periplasmic-binding protein/LacI transcriptional regulator [Burkholderia sp. CCGE1001] gb|ADX55016.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia sp. CCGE1001] Length = 334 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/186 (74%), Positives = 154/186 (82%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M GKW+ LVGSLGS+SQVQWADGG NA KYPKM LV+ K E+ ND E+AY AKE+ Sbjct: 149 MHDEGKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMNLVEPKLETNNDGERAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPNEAGKFLESGAINGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AG+AMNK A MLV GK + +G DLGIPGY KVTV KGPG G+IV GQ WV VDK N Sbjct: 269 DPKLAGIAMNKVAKMLVDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWVNVDKSN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYPF 334 >ref|ZP_06838954.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia sp. Ch1-1] gb|EFG73400.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia sp. Ch1-1] Length = 334 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 137/186 (73%), Positives = 154/186 (82%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M GKW+ LVGSLGS+SQVQWADGG NA KYPKM LV+ K E+ ND E+AY AKE+ Sbjct: 149 MHDDGKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMNLVEPKLETNNDGERAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAINGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AG+AMNK A ML+ GK + +G DLGIPGY KVTV KGPG G+IV GQ WV VDK N Sbjct: 269 DPKLAGIAMNKIAQMLIDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWVNVDKTN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYPF 334 >ref|YP_553911.1| sugar ABC transporter periplasmic ligand binding protein [Burkholderia xenovorans LB400] gb|ABE34561.1| monosaccharide ABC transporter substrate-binding protein, CUT2 family [Burkholderia xenovorans LB400] Length = 334 Score = 288 bits (737), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 137/186 (73%), Positives = 154/186 (82%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M GKW+ LVGSLGS+SQVQWADGG NA KYPKM LV+ K E+ ND E+AY AKE+ Sbjct: 149 MHDDGKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMNLVEPKLETNNDGERAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAINGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AG+AMNK A ML+ GK + +G DLGIPGY KVTV KGPG G+IV GQ WV VDK N Sbjct: 269 DPKLAGIAMNKIAQMLIDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWVNVDKTN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYPF 334 >ref|YP_003907060.1| periplasmic-binding protein/LacI transcriptional regulator [Burkholderia sp. CCGE1003] gb|ADN57769.1| periplasmic binding protein/LacI transcriptional regulator [Burkholderia sp. CCGE1003] Length = 334 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 138/186 (74%), Positives = 154/186 (82%) Query: 1 MGQAGKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEI 60 M GKW+ LVGSLGS+SQVQWADGG ANA KY KM LV+ K E+ ND E+AY AKE+ Sbjct: 149 MHNEGKWAVLVGSLGSRSQVQWADGGIANAKAKYAKMNLVEPKLETNNDGERAYEVAKEV 208 Query: 61 LRKHPDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFW 120 LRKHPD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFW Sbjct: 209 LRKHPDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAINGIAFW 268 Query: 121 DPKDAGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKN 180 DPK AG+AMNK A MLV GK + +G DLGIPGY KVTV KGPG G+IV GQ WV VDK N Sbjct: 269 DPKLAGIAMNKVAKMLVDGKTVENGADLGIPGYTKVTVAKGPGKGIIVRGQGWVNVDKSN 328 Query: 181 YKQYAF 186 YKQY F Sbjct: 329 YKQYPF 334 >ref|YP_556480.1| ABC sugar transporter, periplasmic ligand binding protein [Burkholderia xenovorans LB400] gb|ABE37130.1| monosaccharide ABC transporter substrate-binding protein, CUT2 family [Burkholderia xenovorans LB400] Length = 334 Score = 286 bits (731), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 134/182 (73%), Positives = 153/182 (84%) Query: 5 GKWSSLVGSLGSQSQVQWADGGAANAAKKYPKMTLVDAKNESANDAEKAYAKAKEILRKH 64 GKW+ LVGSLGS+SQVQWADGG NA KYPKM LV+ K E+ ND E+AY AKE+LRKH Sbjct: 153 GKWAVLVGSLGSRSQVQWADGGIGNAKAKYPKMELVEPKLETNNDGERAYEVAKEVLRKH 212 Query: 65 PDIKGFQGSSSLDVLGIGRAVEEAGLQGKVCVYGTGLPSEAAKFLESGAVGGIAFWDPKD 124 PD+KGFQGSSSLDV+GIGRAVEEAG+QGK+CVYGTGLP+EA KFLESGA+ GIAFWDPK Sbjct: 213 PDLKGFQGSSSLDVIGIGRAVEEAGMQGKICVYGTGLPTEAGKFLESGAINGIAFWDPKL 272 Query: 125 AGLAMNKAAMMLVQGKKITDGMDLGIPGYNKVTVKKGPGVGVIVTGQAWVEVDKKNYKQY 184 AG+AMNK A ML+ GK + +G DLGIPGY +VTV KGPG G+IV GQ WV VDK NYK+Y Sbjct: 273 AGIAMNKVAQMLIDGKTVANGADLGIPGYTRVTVAKGPGKGIIVRGQGWVNVDKSNYKEY 332 Query: 185 AF 186 F Sbjct: 333 PF 334