BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0100.p (123 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775497.1| small multidrug resistance transmembrane pro... 236 9e-61 ref|YP_004753111.1| drug/metabolite transporter superfamily perm... 207 3e-52 ref|ZP_08275661.1| putative small multidrug resistance transmemb... 191 2e-47 ref|YP_003745905.1| small multidrug resistance transmembrane pro... 162 2e-38 ref|ZP_07676943.1| membrane protein [Ralstonia sp. 5_7_47FAA] >g... 161 3e-38 ref|YP_001898774.1| small multidrug resistance protein [Ralstoni... 160 5e-38 ref|YP_002981220.1| small multidrug resistance transmembrane pro... 160 7e-38 ref|YP_003604962.1| protein of unknown function DUF6 transmembra... 158 2e-37 ref|ZP_03268328.1| small multidrug resistance protein [Burkholde... 157 5e-37 ref|ZP_03571175.1| putative membrane protein [Burkholderia multi... 157 6e-37 >ref|YP_003775497.1| small multidrug resistance transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ63589.1| small multidrug resistance transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 123 Score = 236 bits (602), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 122/123 (99%), Positives = 122/123 (99%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTA NWFSTGLKLAMQLPIIGGLSCY Sbjct: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAENWFSTGLKLAMQLPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL Sbjct: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 Query: 121 TRS 123 TRS Sbjct: 121 TRS 123 >ref|YP_004753111.1| drug/metabolite transporter superfamily permease [Collimonas fungivorans Ter331] gb|AEK62288.1| Permeases of the drug/metabolite transporter (DMT) superfamily [Collimonas fungivorans Ter331] Length = 125 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 103/123 (83%), Positives = 115/123 (93%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNLTTF FI +G+CLNAVAQLLLKAGTNAVG I LT NWF+TG+KLA QLPI+GGL+CY Sbjct: 3 MNLTTFAFIISGVCLNAVAQLLLKAGTNAVGVISLTPQNWFATGIKLATQLPILGGLTCY 62 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VIS++VWIIGLSRVDVT+AYPMLSLGY+I+AVGAWYFLGEAVS QRL+AIGVIIVGVVLL Sbjct: 63 VISLIVWIIGLSRVDVTIAYPMLSLGYVISAVGAWYFLGEAVSAQRLVAIGVIIVGVVLL 122 Query: 121 TRS 123 TRS Sbjct: 123 TRS 125 >ref|ZP_08275661.1| putative small multidrug resistance transmembrane protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30866.1| putative small multidrug resistance transmembrane protein [Oxalobacteraceae bacterium IMCC9480] Length = 124 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/106 (86%), Positives = 100/106 (94%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFGFI GICLNA+AQLLLKAGTNAVGAIHLTA NWFSTG+KLA QLPI+GGL+CY Sbjct: 2 MNLPTFGFILTGICLNAIAQLLLKAGTNAVGAIHLTAENWFSTGIKLATQLPILGGLTCY 61 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQR 106 V+SV+VWIIGLSRVDVT+AYPMLSLGYIINAVGAWYFLGE VS+QR Sbjct: 62 VVSVLVWIIGLSRVDVTIAYPMLSLGYIINAVGAWYFLGEMVSMQR 107 >ref|YP_003745905.1| small multidrug resistance transmembrane protein [Ralstonia solanacearum CFBP2957] emb|CBJ43296.1| putative small multidrug resistance transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 123 Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG NA+G + N G+KLA QLPIIGGL+CY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNAIGRFAFSVENIVPIGIKLATQLPIIGGLTCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA+ AWY GE ++ QRL+ I +I+VGV +L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAILAWYLFGEVLTAQRLIGIAIILVGVFVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|ZP_07676943.1| membrane protein [Ralstonia sp. 5_7_47FAA] gb|EFP64653.1| membrane protein [Ralstonia sp. 5_7_47FAA] Length = 123 Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 81/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PIIGGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +S+QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLSVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|YP_001898774.1| small multidrug resistance protein [Ralstonia pickettii 12J] gb|ACD26342.1| small multidrug resistance protein [Ralstonia pickettii 12J] Length = 123 Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PI+GGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIVGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +S+QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLSVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|YP_002981220.1| small multidrug resistance transmembrane protein [Ralstonia pickettii 12D] gb|ACS62548.1| putative small multidrug resistance transmembrane protein [Ralstonia pickettii 12D] Length = 123 Score = 160 bits (405), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 96/123 (78%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MNL TFG I G+ LNA AQLLLKAG N +G +A N G+KLA Q PIIGGLSCY Sbjct: 1 MNLVTFGLILTGVMLNACAQLLLKAGVNNIGRFAFSADNILPIGIKLATQWPIIGGLSCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISVVVWI+GLSRVDVT+AYPMLSLGY++NA AWY GE +++QRL+ I +I+VGV++L Sbjct: 61 VISVVVWILGLSRVDVTIAYPMLSLGYVVNAFLAWYLFGEVLTVQRLIGIAIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|YP_003604962.1| protein of unknown function DUF6 transmembrane [Burkholderia sp. CCGE1002] gb|ADG15451.1| protein of unknown function DUF6 transmembrane [Burkholderia sp. CCGE1002] Length = 123 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 80/123 (65%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN + I AG+ LNA AQLLLKAGTNAVG T N G KLA Q PIIGGL+CY Sbjct: 1 MNPISLFCILAGVTLNAGAQLLLKAGTNAVGHFEFTRANILPIGFKLATQPPIIGGLACY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 VISV VWIIGLSRVDV++AYPMLSLGY++NA+ AWY GE +S+Q+L+ IG+I+VGVV+L Sbjct: 61 VISVAVWIIGLSRVDVSIAYPMLSLGYVVNAIAAWYLFGEVMSVQKLVGIGIILVGVVVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|ZP_03268328.1| small multidrug resistance protein [Burkholderia sp. H160] gb|EEA00077.1| small multidrug resistance protein [Burkholderia sp. H160] Length = 123 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN + I AG+ LNA AQLLLKAGTNAVG T N G KLA Q PIIGGL+CY Sbjct: 1 MNPISLFCILAGVTLNAGAQLLLKAGTNAVGHFEFTRANILPIGFKLATQPPIIGGLACY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 V+SV VWIIGLSRVDV++AYPMLSLGY++NA+ AWY GE +S+Q+L+ IG+I++GVV+L Sbjct: 61 VVSVAVWIIGLSRVDVSIAYPMLSLGYVVNAIAAWYLFGEVMSVQKLVGIGIILIGVVVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123 >ref|ZP_03571175.1| putative membrane protein [Burkholderia multivorans CGD2M] ref|ZP_03581383.1| putative membrane protein [Burkholderia multivorans CGD2] gb|EEE04237.1| putative membrane protein [Burkholderia multivorans CGD2] gb|EEE14462.1| putative membrane protein [Burkholderia multivorans CGD2M] Length = 123 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 78/123 (63%), Positives = 95/123 (77%) Query: 1 MNLTTFGFIFAGICLNAVAQLLLKAGTNAVGAIHLTAGNWFSTGLKLAMQLPIIGGLSCY 60 MN +F I G+ LNA AQLLLKAG NAVG + N GLK+A QLPIIGGL CY Sbjct: 1 MNPISFVCIITGVLLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLGCY 60 Query: 61 VISVVVWIIGLSRVDVTVAYPMLSLGYIINAVGAWYFLGEAVSLQRLLAIGVIIVGVVLL 120 V+SVVVWI+GLSRVDV++AYPMLSLGY++NA AWY GE +S+QRL+ IG+I+VGV++L Sbjct: 61 VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILVGVLVL 120 Query: 121 TRS 123 RS Sbjct: 121 ARS 123