BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0090.p (481 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum ser... 974 0.0 ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium ... 823 0.0 ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae ba... 821 0.0 ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arse... 820 0.0 ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivo... 817 0.0 ref|YP_001898762.1| replicative DNA helicase [Ralstonia picketti... 791 0.0 ref|YP_002981208.1| replicative DNA helicase [Ralstonia picketti... 790 0.0 ref|YP_003752696.1| replicative DNA helicase [Ralstonia solanace... 789 0.0 ref|NP_519432.1| replicative DNA helicase [Ralstonia solanacearu... 788 0.0 emb|CBJ38562.1| replicative DNA helicase [Ralstonia solanacearum... 788 0.0 >ref|YP_003775486.1| replicative DNA helicase [Herbaspirillum seropedicae SmR1] gb|ADJ63578.1| replicative DNA helicase protein [Herbaspirillum seropedicae SmR1] Length = 478 Score = 974 bits (2518), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/478 (100%), Positives = 478/478 (100%) Query: 4 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 63 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE Sbjct: 1 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 60 Query: 64 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 123 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN Sbjct: 61 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 120 Query: 124 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 183 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG Sbjct: 121 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 180 Query: 184 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 243 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK Sbjct: 181 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 240 Query: 244 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 303 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL Sbjct: 241 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 300 Query: 304 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 363 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN Sbjct: 301 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 360 Query: 364 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 423 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL Sbjct: 361 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 420 Query: 424 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 481 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD Sbjct: 421 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 478 >ref|YP_001352995.1| replicative DNA helicase [Janthinobacterium sp. Marseille] gb|ABR88333.1| replicative DNA helicase [Janthinobacterium sp. Marseille] Length = 461 Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/460 (88%), Positives = 439/460 (95%), Gaps = 3/460 (0%) Query: 22 SDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 81 +DPQ+++LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV+ +DFYRYDHRIIF+HIVKLI Sbjct: 5 ADPQLESLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVNHDDFYRYDHRIIFQHIVKLI 64 Query: 82 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 141 N+ +PADVITV+EA++ SGKAEEVGG+ YLNALAQNTPSAANIRRYAEIVRDRG+LRKLI Sbjct: 65 NNARPADVITVFEALTNSGKAEEVGGVAYLNALAQNTPSAANIRRYAEIVRDRGVLRKLI 124 Query: 142 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 201 TV+DEISGNAFNPQGK+VK MLDEAESKIFAIAEEG+RG+QGF EIQPLLTQVVERIDEL Sbjct: 125 TVSDEISGNAFNPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQVVERIDEL 184 Query: 202 YNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 261 YNRDS+SDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAIESGLP Sbjct: 185 YNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIESGLP 244 Query: 262 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 321 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRL DEDWPRLTHAIQKMNDAQ YIDETP Sbjct: 245 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLADEDWPRLTHAIQKMNDAQLYIDETP 304 Query: 322 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 381 AL+ IELRARSRRL+RQCGKLGLIIIDYLQLMS N S+ ENRA+EISEISRSLKGLAKE Sbjct: 305 ALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSAN--SAGENRATEISEISRSLKGLAKE 362 Query: 382 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 441 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 422 Query: 442 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 481 EIIIGKQRNGPIG++RL+FLG YTK++NY G+ A Y GD Sbjct: 423 EIIIGKQRNGPIGAVRLTFLGQYTKFENYTGSAAL-YQGD 461 >ref|ZP_08275954.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30578.1| Replicative DNA helicase [Oxalobacteraceae bacterium IMCC9480] Length = 483 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/459 (89%), Positives = 436/459 (94%), Gaps = 3/459 (0%) Query: 23 DPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLIN 82 D Q+DALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYRYDHR+IF+HIVKLIN Sbjct: 28 DIQLDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYRYDHRLIFQHIVKLIN 87 Query: 83 STKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLIT 142 +KPADVITV+E+++++GKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDRG+LRKLIT Sbjct: 88 GSKPADVITVFESLTSTGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGVLRKLIT 147 Query: 143 VADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDELY 202 VADEISG AFNPQGK+VK MLDEAESKIFAIAEEGSRG+QGF EIQPLLTQVVERIDELY Sbjct: 148 VADEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEIQPLLTQVVERIDELY 207 Query: 203 NRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLPV 262 NRD+ SDITGVPTGF DLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGE+VAI++GLPV Sbjct: 208 NRDNQSDITGVPTGFADLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGENVAIDTGLPV 267 Query: 263 AVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETPA 322 AVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAIQKMNDAQ YIDETPA Sbjct: 268 AVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAIQKMNDAQLYIDETPA 327 Query: 323 LSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKEL 382 L+ IELRARSRRL+RQCGKLGLIIIDYLQLMSGN S+ ENRA+EISEISRSLKGLAKEL Sbjct: 328 LNSIELRARSRRLSRQCGKLGLIIIDYLQLMSGN--SAGENRATEISEISRSLKGLAKEL 385 Query: 383 NCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAE 442 NCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAE Sbjct: 386 NCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTAE 445 Query: 443 IIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 481 IIIGKQRNGPIGSIRL+F G YTK+DNY GN A YGGD Sbjct: 446 IIIGKQRNGPIGSIRLTFQGQYTKFDNYTGN-APLYGGD 483 >ref|YP_001100418.1| replicative DNA helicase [Herminiimonas arsenicoxydans] emb|CAL62295.1| Replicative DNA helicase [Herminiimonas arsenicoxydans] Length = 461 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/460 (88%), Positives = 436/460 (94%), Gaps = 3/460 (0%) Query: 22 SDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 81 +DPQ+D+LRVPPHSIEAEQSVLGGLLLDNAAWDRIADFV +DFYRYDHRIIF+HIV+LI Sbjct: 5 ADPQVDSLRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVHQDDFYRYDHRIIFQHIVRLI 64 Query: 82 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 141 N ++PADVITV+EA++ SGKAEEVGG+ YLNALAQNTPSAANIRRYAEIVRDRGILRKLI Sbjct: 65 NGSRPADVITVFEALTNSGKAEEVGGVSYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 124 Query: 142 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 201 TV+DEISG AFNPQGK+VK MLDEAESKIFAIAEEGSRG+QGF EIQPLLTQVVERIDEL Sbjct: 125 TVSDEISGQAFNPQGKEVKQMLDEAESKIFAIAEEGSRGAQGFQEIQPLLTQVVERIDEL 184 Query: 202 YNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 261 YNRDS+SDITGVPTGF DLD+MTSGLQPGDLIIVAGRPSMGKTAFSINIGE VAIESGLP Sbjct: 185 YNRDSTSDITGVPTGFADLDRMTSGLQPGDLIIVAGRPSMGKTAFSINIGETVAIESGLP 244 Query: 262 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 321 VAVFSMEMGG QLAMRMLGSVGRLDQHRLRTG+L DEDWPRLTHAIQKMNDAQ YIDETP Sbjct: 245 VAVFSMEMGGTQLAMRMLGSVGRLDQHRLRTGKLADEDWPRLTHAIQKMNDAQLYIDETP 304 Query: 322 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 381 AL+ IELRARSRRL+RQCGKLGLIIIDYLQLMS N SS ENRA+EISEISR+LKGLAKE Sbjct: 305 ALNSIELRARSRRLSRQCGKLGLIIIDYLQLMSAN--SSGENRATEISEISRNLKGLAKE 362 Query: 382 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 441 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 422 Query: 442 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 481 EIIIGKQRNGPIGS+RL+FLG YTK++NY G+ A Y GD Sbjct: 423 EIIIGKQRNGPIGSVRLTFLGQYTKFENYTGSAAL-YQGD 461 >ref|YP_004753132.1| replicative DNA helicase [Collimonas fungivorans Ter331] gb|AEK62309.1| Replicative DNA helicase [Collimonas fungivorans Ter331] Length = 466 Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/463 (87%), Positives = 437/463 (94%), Gaps = 2/463 (0%) Query: 19 KESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIV 78 K SDPQ+D+LRVPPHSIEAEQSVLGGLLLDNAAWD+IADFVSA+DFYRYDHRIIF+H+V Sbjct: 6 KAPSDPQLDSLRVPPHSIEAEQSVLGGLLLDNAAWDKIADFVSADDFYRYDHRIIFQHMV 65 Query: 79 KLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILR 138 KLIN +KPADVITV+E++S +GKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDRG+LR Sbjct: 66 KLINGSKPADVITVFESLSGTGKAEEVGGLSYLNALAQNTPSAANIRRYAEIVRDRGVLR 125 Query: 139 KLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERI 198 KLITVADEISG AF+PQGK+VK MLDEAESKIFAIAEEG+RG+QGF EIQPLLTQVVERI Sbjct: 126 KLITVADEISGQAFSPQGKEVKQMLDEAESKIFAIAEEGARGAQGFQEIQPLLTQVVERI 185 Query: 199 DELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIES 258 DELYNRD+ SDITGV TGF+DLDKMTSGLQ GDL+IVAGRPSMGKTAFS+NIGE+VAIES Sbjct: 186 DELYNRDNQSDITGVSTGFIDLDKMTSGLQKGDLVIVAGRPSMGKTAFSVNIGENVAIES 245 Query: 259 GLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYID 318 GLPVA+FSMEMGG QLAMRMLGSVG+LDQHRLRTGRL DEDWPRLTHAIQKMNDAQ +ID Sbjct: 246 GLPVAIFSMEMGGTQLAMRMLGSVGKLDQHRLRTGRLNDEDWPRLTHAIQKMNDAQLFID 305 Query: 319 ETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGL 378 ETPALS IELRAR+RRL+RQCG LGLIIIDYLQLMS N ++ ENRA+EISEISR+LKGL Sbjct: 306 ETPALSSIELRARARRLSRQCGTLGLIIIDYLQLMSAN--NAGENRATEISEISRNLKGL 363 Query: 379 AKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDK 438 AKEL CPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDS +K Sbjct: 364 AKELQCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSQEK 423 Query: 439 GTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIGNLAQPYGGD 481 GTAEIIIGKQRNGPIGS+RLSF+G YTK+DNY GNL PYGGD Sbjct: 424 GTAEIIIGKQRNGPIGSVRLSFIGQYTKFDNYAGNLDAPYGGD 466 >ref|YP_001898762.1| replicative DNA helicase [Ralstonia pickettii 12J] gb|ACD26330.1| replicative DNA helicase [Ralstonia pickettii 12J] Length = 462 Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/451 (85%), Positives = 426/451 (94%), Gaps = 2/451 (0%) Query: 22 SDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 81 SDPQ+D+L+VPPHSIEAEQSVLGGLLLDNAAWDRIADF++ DFYRYDHR+IF +I KLI Sbjct: 5 SDPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEHDFYRYDHRLIFHNIGKLI 64 Query: 82 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 141 + KPADVITVYE + +GKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDRG+LR+L+ Sbjct: 65 SQAKPADVITVYEQLQAAGKAEEVGGLAYLNALAQNTPSAANIRRYAEIVRDRGVLRQLV 124 Query: 142 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 201 T+ADEIS AFNPQG+DV+ +LDEAESK+FAIAEEGSRG +GF+EIQPLLTQVVERIDEL Sbjct: 125 TIADEISAGAFNPQGRDVRQLLDEAESKVFAIAEEGSRGQKGFLEIQPLLTQVVERIDEL 184 Query: 202 YNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 261 Y+RD+ SDITGVPTGF+DLD+MTSG+Q GDLIIVAGRPSMGKTAFS+NIGEHVA+E GLP Sbjct: 185 YHRDNQSDITGVPTGFVDLDRMTSGMQGGDLIIVAGRPSMGKTAFSLNIGEHVAVEQGLP 244 Query: 262 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 321 VAVFSMEM G QLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQ +IDETP Sbjct: 245 VAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQLFIDETP 304 Query: 322 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 381 AL+P+ELRARSRRLARQCG+LGLI+IDYLQLMSG+G S ENRA+EISEISRSLKGLAKE Sbjct: 305 ALNPMELRARSRRLARQCGQLGLIVIDYLQLMSGSG--SGENRATEISEISRSLKGLAKE 362 Query: 382 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 441 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRD+VYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDQVYNPDSPDKGTA 422 Query: 442 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIG 472 EIIIGKQRNGPIG++RL+FLG YTK+DN+ G Sbjct: 423 EIIIGKQRNGPIGTVRLTFLGEYTKFDNFTG 453 >ref|YP_002981208.1| replicative DNA helicase [Ralstonia pickettii 12D] ref|ZP_07676955.1| replicative DNA helicase [Ralstonia sp. 5_7_47FAA] gb|ACS62536.1| replicative DNA helicase [Ralstonia pickettii 12D] gb|EFP64665.1| replicative DNA helicase [Ralstonia sp. 5_7_47FAA] Length = 462 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/451 (85%), Positives = 426/451 (94%), Gaps = 2/451 (0%) Query: 22 SDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAEDFYRYDHRIIFEHIVKLI 81 SDPQ+D+L+VPPHSIEAEQSVLGGLLLDNAAWDRIADF++ DFYRYDHR+IF +I KLI Sbjct: 5 SDPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEHDFYRYDHRLIFHNIGKLI 64 Query: 82 NSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAANIRRYAEIVRDRGILRKLI 141 + KPADVITV+E + +GKAEEVGGL YLNALAQNTPSAANIRRYAEIVRDRG+LR+L+ Sbjct: 65 SQAKPADVITVFEQLQAAGKAEEVGGLAYLNALAQNTPSAANIRRYAEIVRDRGVLRQLV 124 Query: 142 TVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQGFMEIQPLLTQVVERIDEL 201 T+ADEIS AFNPQG+DV+ +LDEAESK+FAIAEEGSRG +GF+EIQPLLTQVVERIDEL Sbjct: 125 TIADEISAGAFNPQGRDVRQLLDEAESKVFAIAEEGSRGQKGFLEIQPLLTQVVERIDEL 184 Query: 202 YNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGKTAFSINIGEHVAIESGLP 261 Y+RD+ SDITGVPTGF+DLD+MTSG+Q GDLIIVAGRPSMGKTAFS+NIGEHVA+E GLP Sbjct: 185 YHRDNQSDITGVPTGFVDLDRMTSGMQGGDLIIVAGRPSMGKTAFSLNIGEHVAVEQGLP 244 Query: 262 VAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQFYIDETP 321 VAVFSMEM G QLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQ +IDETP Sbjct: 245 VAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHAIQKMNDAQLFIDETP 304 Query: 322 ALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSENRASEISEISRSLKGLAKE 381 AL+P+ELRARSRRLARQCG+LGLI+IDYLQLMSG+G S ENRA+EISEISRSLKGLAKE Sbjct: 305 ALNPMELRARSRRLARQCGQLGLIVIDYLQLMSGSG--SGENRATEISEISRSLKGLAKE 362 Query: 382 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSPDKGTA 441 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRD+VYNPDSPDKGTA Sbjct: 363 LNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDQVYNPDSPDKGTA 422 Query: 442 EIIIGKQRNGPIGSIRLSFLGMYTKYDNYIG 472 EIIIGKQRNGPIG++RL+FLG YTK+DN+ G Sbjct: 423 EIIIGKQRNGPIGTVRLTFLGEYTKFDNFTG 453 >ref|YP_003752696.1| replicative DNA helicase [Ralstonia solanacearum PSI07] emb|CBJ51421.1| replicative DNA helicase [Ralstonia solanacearum PSI07] emb|CCA82379.1| replicative DNA helicase [blood disease bacterium R229] emb|CCA84170.1| replicative DNA helicase [Ralstonia syzygii R24] Length = 472 Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/469 (82%), Positives = 430/469 (91%), Gaps = 6/469 (1%) Query: 4 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 63 M R NP +DPQ+++L+VPPHSIEAEQSVLGGLLLDNAAWDRIADF++ Sbjct: 1 MNAPRRYNP----AMNAPTDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEH 56 Query: 64 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 123 DFYRYDHR+IF +I KLI+ KPADVITVYE + SGK+EEVGGL YLNALAQNTPSAAN Sbjct: 57 DFYRYDHRLIFHNIGKLISQAKPADVITVYEMLQASGKSEEVGGLAYLNALAQNTPSAAN 116 Query: 124 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 183 IRRYAEIVRDRG+LR+L+T+ADEIS AFNPQG+DV+ +LDEAESK+FAIAEEG+RG +G Sbjct: 117 IRRYAEIVRDRGVLRQLVTIADEISAGAFNPQGRDVRQLLDEAESKVFAIAEEGARGQKG 176 Query: 184 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 243 F+EIQPLLTQVVERIDELY+RDS SDITG+PTGF+DLD+MTSG+Q GDLIIVAGRPSMGK Sbjct: 177 FLEIQPLLTQVVERIDELYHRDSQSDITGIPTGFVDLDRMTSGMQGGDLIIVAGRPSMGK 236 Query: 244 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 303 TAFS+NIGEHVA+E GLPVAVFSMEM G QLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL Sbjct: 237 TAFSLNIGEHVAVEQGLPVAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 296 Query: 304 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 363 THAIQKMNDAQ +IDETPAL+P+ELRARSRRLARQCG+LGLIIIDYLQLMSG+GG EN Sbjct: 297 THAIQKMNDAQLFIDETPALNPMELRARSRRLARQCGQLGLIIIDYLQLMSGSGG--GEN 354 Query: 364 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 423 RA+EISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL Sbjct: 355 RATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 414 Query: 424 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIG 472 FIYRD+VYNPDSPDKGTAEIIIGKQRNGPIG++RL+FLG YTK+DN+ G Sbjct: 415 FIYRDQVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFLGEYTKFDNFTG 463 >ref|NP_519432.1| replicative DNA helicase [Ralstonia solanacearum GMI1000] emb|CAD15013.1| probable replicative dna helicase protein [Ralstonia solanacearum GMI1000] Length = 473 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/469 (82%), Positives = 430/469 (91%), Gaps = 5/469 (1%) Query: 4 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 63 M R NP +DPQ+++L+VPPHSIEAEQSVLGGLLLDNAAWDRIADF++ Sbjct: 1 MNAPRRYNP----AMNAPTDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEH 56 Query: 64 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 123 DFYRYDHR+IF +I KLI+ KPADVITVYE + +GKAEEVGGL YLNALAQNTPSAAN Sbjct: 57 DFYRYDHRLIFHNIGKLISQAKPADVITVYEQLQAAGKAEEVGGLAYLNALAQNTPSAAN 116 Query: 124 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 183 IRRYAEIVRDRG+LR+L+T+ADEIS AFNPQG+DV+ +LDEAESK+FAIAEEG+RG +G Sbjct: 117 IRRYAEIVRDRGVLRQLVTIADEISAGAFNPQGRDVRQLLDEAESKVFAIAEEGARGQKG 176 Query: 184 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 243 F+EIQPLLTQVVERIDELY+RD+ SDITGVPTGF+DLD+MTSG+Q GDLIIVAGRPSMGK Sbjct: 177 FLEIQPLLTQVVERIDELYHRDNQSDITGVPTGFVDLDRMTSGMQGGDLIIVAGRPSMGK 236 Query: 244 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 303 TAFS+NIGEHVA+E GLPVAVFSMEM G QLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL Sbjct: 237 TAFSLNIGEHVAVEQGLPVAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 296 Query: 304 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 363 THAIQKMNDAQ +IDETPAL+P+ELRARSRRLARQCG+LGLIIIDYLQLMSG+GG EN Sbjct: 297 THAIQKMNDAQLFIDETPALNPMELRARSRRLARQCGQLGLIIIDYLQLMSGSGG-GGEN 355 Query: 364 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 423 RA+EISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL Sbjct: 356 RATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 415 Query: 424 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIG 472 FIYRD+VYNPDSPDKGTAEIIIGKQRNGPIG++RL+FLG YTK+DN+ G Sbjct: 416 FIYRDQVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFLGEYTKFDNFTG 464 >emb|CBJ38562.1| replicative DNA helicase [Ralstonia solanacearum CMR15] Length = 472 Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/469 (82%), Positives = 430/469 (91%), Gaps = 6/469 (1%) Query: 4 MKESSRGNPEFFRGQKESSDPQIDALRVPPHSIEAEQSVLGGLLLDNAAWDRIADFVSAE 63 M R NP +DPQ+++L+VPPHSIEAEQSVLGGLLLDNAAWDRIADF++ Sbjct: 1 MNAPRRYNP----AMNAPTDPQLESLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFINEH 56 Query: 64 DFYRYDHRIIFEHIVKLINSTKPADVITVYEAMSTSGKAEEVGGLVYLNALAQNTPSAAN 123 DFYRYDHR+IF +I KLI+ KPADVITVYE + SGKAEEVGGL YLNALAQNTPSAAN Sbjct: 57 DFYRYDHRLIFHNIGKLISQAKPADVITVYEQLQASGKAEEVGGLAYLNALAQNTPSAAN 116 Query: 124 IRRYAEIVRDRGILRKLITVADEISGNAFNPQGKDVKSMLDEAESKIFAIAEEGSRGSQG 183 IRRYAEIVRDRG+LR+L+T+ADEIS AFNPQG+DV+ +LDEAESK+FAIAEEG+RG +G Sbjct: 117 IRRYAEIVRDRGVLRQLVTIADEISAGAFNPQGRDVRQLLDEAESKVFAIAEEGARGQKG 176 Query: 184 FMEIQPLLTQVVERIDELYNRDSSSDITGVPTGFMDLDKMTSGLQPGDLIIVAGRPSMGK 243 F+EIQPLLTQVVERIDELY+RD+ SDITGVPTGF+DLD+MTSG+Q GDLIIVAGRPSMGK Sbjct: 177 FLEIQPLLTQVVERIDELYHRDNQSDITGVPTGFVDLDRMTSGMQGGDLIIVAGRPSMGK 236 Query: 244 TAFSINIGEHVAIESGLPVAVFSMEMGGAQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 303 TAFS+NIGEHVA+E GLPVAVFSMEM G QLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL Sbjct: 237 TAFSLNIGEHVAVEQGLPVAVFSMEMAGTQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRL 296 Query: 304 THAIQKMNDAQFYIDETPALSPIELRARSRRLARQCGKLGLIIIDYLQLMSGNGGSSSEN 363 THAIQKMNDAQ +IDETPAL+P+ELRARSRRLARQCG+LGLI+IDYLQLMSG+G S EN Sbjct: 297 THAIQKMNDAQLFIDETPALNPMELRARSRRLARQCGQLGLIVIDYLQLMSGSG--SGEN 354 Query: 364 RASEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 423 RA+EISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL Sbjct: 355 RATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVIL 414 Query: 424 FIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGSIRLSFLGMYTKYDNYIG 472 FIYRD+VYNPDSPDKGTAEIIIGKQRNGPIG++RL+FLG YTK+DN+ G Sbjct: 415 FIYRDQVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFLGEYTKFDNFTG 463