BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0087.p (99 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775483.1| primosomal protein N [Herbaspirillum seroped... 197 4e-49 ref|ZP_08275957.1| Primosomal replication protein N [Oxalobacter... 144 4e-33 ref|YP_001352992.1| primosomal replication protein N [Janthinoba... 134 4e-30 ref|YP_001100421.1| primosomal replication protein n [Herminiimo... 134 4e-30 ref|YP_004753135.1| primosomal replication protein N [Collimonas... 132 1e-29 ref|YP_004360929.1| Putative primosomal replication protein [Bur... 110 5e-23 ref|YP_442701.1| primosomal replication protein n [Burkholderia ... 108 3e-22 ref|YP_004029054.1| Primosomal replication protein N [Burkholder... 107 5e-22 gb|EGD01100.1| primosomal replication protein N [Burkholderia sp... 107 6e-22 ref|ZP_02379375.1| primosomal replication protein N-like protein... 107 6e-22 >ref|YP_003775483.1| primosomal protein N [Herbaspirillum seropedicae SmR1] gb|ADJ63575.1| primosomal replication N protein [Herbaspirillum seropedicae SmR1] Length = 99 Score = 197 bits (501), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 97/99 (97%), Positives = 99/99 (100%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +NQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA Sbjct: 1 MNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 LNRAALGE+FRFTGFLARRNRNSKSVVFHIVDFGPVAPD Sbjct: 61 LNRAALGEIFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 >ref|ZP_08275957.1| Primosomal replication protein N [Oxalobacteraceae bacterium IMCC9480] gb|EGF30581.1| Primosomal replication protein N [Oxalobacteraceae bacterium IMCC9480] Length = 106 Score = 144 bits (364), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 66/97 (68%), Positives = 85/97 (87%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +NQ Q +AS+AER+++RYTPAGIPIV+A+LQH S Q EA ++RQVEFEI+A+AAGEISG Sbjct: 1 MNQLQFVASIAERELMRYTPAGIPIVSAKLQHASTQTEARVERQVEFEISAIAAGEISGR 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVA 97 ++A LG +FRFTGFLAR+NRNSKS+VFHI+DF P + Sbjct: 61 FDQARLGAMFRFTGFLARKNRNSKSLVFHIIDFEPTS 97 >ref|YP_001352992.1| primosomal replication protein N [Janthinobacterium sp. Marseille] gb|ABR90443.1| primosomal replication protein N [Janthinobacterium sp. Marseille] Length = 97 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 62/93 (66%), Positives = 80/93 (86%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +NQ Q IA++AER++LRYTPAG+PIV+A L H S+Q+EAG+ R VEFEIAA+AAGEISG Sbjct: 1 MNQLQFIATIAEREILRYTPAGVPIVSAVLLHSSQQIEAGVPRLVEFEIAAIAAGEISGR 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDF 93 N+A LG ++FTGFLAR++RNSKS+VFH+ DF Sbjct: 61 FNQAELGGTYQFTGFLARKSRNSKSLVFHLTDF 93 >ref|YP_001100421.1| primosomal replication protein n [Herminiimonas arsenicoxydans] emb|CAL62298.1| Primosomal replication protein N [Herminiimonas arsenicoxydans] Length = 97 Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 61/93 (65%), Positives = 80/93 (86%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +NQ Q +A++AER++LRYTPAG+PIV+A L H S+Q+EAG+ R +EFEIAA+AAGEISG Sbjct: 1 MNQLQFVATIAEREILRYTPAGVPIVSAVLLHSSQQIEAGVPRLIEFEIAAIAAGEISGR 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDF 93 N+A LG F+FTGFLAR++RNSKS+VFH+ DF Sbjct: 61 FNQAELGGTFQFTGFLARKSRNSKSLVFHLTDF 93 >ref|YP_004753135.1| primosomal replication protein N [Collimonas fungivorans Ter331] gb|AEK62312.1| Primosomal replication protein N [Collimonas fungivorans Ter331] Length = 120 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/95 (65%), Positives = 80/95 (84%) Query: 2 NQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGAL 61 N FQ++A +AER+V+RYTPAGIPIV+A LQH+SE +EAG+KR +EFEIAALA GEISG Sbjct: 6 NVFQLVAVIAEREVIRYTPAGIPIVSAILQHRSEPIEAGIKRLIEFEIAALAVGEISGRF 65 Query: 62 NRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPV 96 ++AALG F FTGF+AR++RN +S+VFHI DF + Sbjct: 66 SQAALGGSFWFTGFMARKSRNGRSLVFHITDFAAI 100 >ref|YP_004360929.1| Putative primosomal replication protein [Burkholderia gladioli BSR3] gb|AEA60973.1| Putative primosomal replication protein [Burkholderia gladioli BSR3] Length = 99 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 50/99 (50%), Positives = 70/99 (70%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +N+ Q+ AS+ ER +RYTPAG+PI + LQH++E VEAGM+RQVE I A+AAGE SG Sbjct: 1 MNRLQLTASVVERQAVRYTPAGVPIASCTLQHRTEVVEAGMRRQVEMTIEAMAAGEASGK 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 L +G FTGFLA+++RN++++VFHI + D Sbjct: 61 LEACEMGVETLFTGFLAKKSRNARTLVFHITALQDIGKD 99 >ref|YP_442701.1| primosomal replication protein n [Burkholderia thailandensis E264] ref|ZP_02374514.1| primosomal replication protein n [Burkholderia thailandensis TXDOH] ref|ZP_02388391.1| primosomal replication protein n [Burkholderia thailandensis Bt4] ref|ZP_05587175.1| primosomal replication protein n [Burkholderia thailandensis E264] gb|ABC38501.1| primosomal replication protein n [Burkholderia thailandensis E264] Length = 99 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/99 (51%), Positives = 71/99 (71%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +N+ Q+ AS+ ER+ +RYTPAG+PI +A LQH++E VEAG+ RQVE I A+AAGE SG Sbjct: 1 MNRLQLTASVVEREPVRYTPAGVPIASATLQHRTEVVEAGIARQVELTIPAVAAGEASGK 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 L +G FTGFLA+R+RN++++VFHI + D Sbjct: 61 LEACEMGVETLFTGFLAKRHRNARTLVFHITALQDIGKD 99 >ref|YP_004029054.1| Primosomal replication protein N [Burkholderia rhizoxinica HKI 454] emb|CBW74910.1| Primosomal replication protein N [Burkholderia rhizoxinica HKI 454] Length = 100 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 52/98 (53%), Positives = 69/98 (70%) Query: 2 NQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGAL 61 N+ Q++AS+ ERD +RYTPAG+PIV L+H+SE VEAG+ R+VE I ALAAG+IS + Sbjct: 3 NRLQLVASVIERDPVRYTPAGVPIVNCVLRHESEVVEAGVSRRVELTIPALAAGDISSKV 62 Query: 62 NRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 LG F GFLARR+RN+K++VFHI + D Sbjct: 63 AACGLGVHAHFDGFLARRHRNAKTLVFHITALQDIEKD 100 >gb|EGD01100.1| primosomal replication protein N [Burkholderia sp. TJI49] Length = 99 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 51/99 (51%), Positives = 70/99 (70%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +N+ Q+ AS+ ER +RYTPAG+PI +A LQH +E VEAG+ R+V+ I A+AAGE SG Sbjct: 1 MNRLQLTASVVERAAVRYTPAGVPIASATLQHSTEVVEAGIPRRVDMTIEAVAAGEASGR 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 L R LG FTGFLAR++RN++++VFHI + D Sbjct: 61 LERCELGVETLFTGFLARKSRNARTLVFHITALQDIGKD 99 >ref|ZP_02379375.1| primosomal replication protein N-like protein [Burkholderia ubonensis Bu] Length = 99 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 50/99 (50%), Positives = 71/99 (71%) Query: 1 VNQFQVIASLAERDVLRYTPAGIPIVTARLQHQSEQVEAGMKRQVEFEIAALAAGEISGA 60 +N+ Q+ AS+ ER +RYTPAG+PI +A LQH++E VEAG++RQVE I A+AAGE SG Sbjct: 1 MNRLQLTASVVERAAVRYTPAGVPIASATLQHRTEVVEAGIRRQVEMTIEAVAAGEASGR 60 Query: 61 LNRAALGEVFRFTGFLARRNRNSKSVVFHIVDFGPVAPD 99 L +G FTGFLA+++RN++++VFHI + D Sbjct: 61 LEGCEMGVETLFTGFLAKKSRNARTLVFHITALQDIGKD 99