BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0016.0086.p (121 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775482.1| 30S ribosomal protein S6 [Herbaspirillum ser... 252 1e-65 ref|YP_004753136.1| 30S ribosomal protein S6p [Collimonas fungiv... 237 4e-61 ref|YP_001352991.1| 30S ribosomal protein S6 [Janthinobacterium ... 229 9e-59 ref|YP_001100422.1| 30S ribosomal protein S6 [Herminiimonas arse... 229 1e-58 ref|ZP_08275958.1| SSU ribosomal protein S6p [Oxalobacteraceae b... 218 2e-55 ref|ZP_04579095.1| small subunit ribosomal protein S6 [Oxalobact... 204 3e-51 ref|ZP_04576338.1| small subunit ribosomal protein S6 [Oxalobact... 203 9e-51 ref|ZP_03269156.1| ribosomal protein S6 [Burkholderia sp. H160] ... 201 3e-50 ref|YP_558569.1| 30S ribosomal protein S6 [Burkholderia xenovora... 201 4e-50 ref|YP_003604946.1| ribosomal protein S6 [Burkholderia sp. CCGE1... 201 4e-50 >ref|YP_003775482.1| 30S ribosomal protein S6 [Herbaspirillum seropedicae SmR1] emb|CAM32642.1| 30S ribosomal subunit protein S6 [Herbaspirillum seropedicae] gb|ADJ63574.1| 30S ribosomal subunit S6 protein [Herbaspirillum seropedicae SmR1] Length = 121 Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 121/121 (100%), Positives = 121/121 (100%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA Sbjct: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 Query: 121 A 121 A Sbjct: 121 A 121 >ref|YP_004753136.1| 30S ribosomal protein S6p [Collimonas fungivorans Ter331] gb|AEK62313.1| SSU ribosomal protein S6p [Collimonas fungivorans Ter331] Length = 134 Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 115/122 (94%), Positives = 118/122 (96%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGG VHRVEDWGRRQLAY IQKLAKAHYV Sbjct: 13 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGTVHRVEDWGRRQLAYLIQKLAKAHYV 72 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 CLNIE DSETLAEIETGFKFNDAVLRHLTVK+KKAETGPSP++KAVQKEDAAKS RTEAP Sbjct: 73 CLNIECDSETLAEIETGFKFNDAVLRHLTVKLKKAETGPSPMMKAVQKEDAAKSHRTEAP 132 Query: 120 AA 121 AA Sbjct: 133 AA 134 >ref|YP_001352991.1| 30S ribosomal protein S6 [Janthinobacterium sp. Marseille] sp|A6SXJ4.1|RS6_JANMA RecName: Full=30S ribosomal protein S6 gb|ABR90148.1| small subunit ribosomal protein S6 [Janthinobacterium sp. Marseille] Length = 122 Score = 229 bits (584), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 110/122 (90%), Positives = 114/122 (93%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVT RGG +HRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTARGGVIHRVEDWGRRQMAYMIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 CLNIE D ETLAEIETGFKFNDAVLRHLTVKMKKAET PSP++KAVQKEDAAKS R EAP Sbjct: 61 CLNIECDGETLAEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKEDAAKSHRAEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >ref|YP_001100422.1| 30S ribosomal protein S6 [Herminiimonas arsenicoxydans] sp|A4G712.1|RS6_HERAR RecName: Full=30S ribosomal protein S6 emb|CAL62299.1| 30S ribosomal subunit protein S6 [Herminiimonas arsenicoxydans] Length = 122 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 111/122 (90%), Positives = 114/122 (93%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKGIVT RGG VHRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTARGGVVHRVEDWGRRQMAYLIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 CLNIE D ETL EIETGFKFNDAVLRHLTVKMKKAET PSP++KAVQKEDAAKS RTEAP Sbjct: 61 CLNIECDGETLTEIETGFKFNDAVLRHLTVKMKKAETAPSPMMKAVQKEDAAKSHRTEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >ref|ZP_08275958.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480] gb|EGF30582.1| SSU ribosomal protein S6p [Oxalobacteraceae bacterium IMCC9480] Length = 122 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 103/122 (84%), Positives = 111/122 (90%), Gaps = 1/122 (0%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +V G VHRVEDWGRRQ+AY IQKLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKAVVAAHSGVVHRVEDWGRRQMAYLIQKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKS-RTEAP 119 C+NIE D+ETL EIETGFKFNDAVLRHLTVK+KKAET PSP++KAVQKEDAAKS R+EAP Sbjct: 61 CMNIECDNETLVEIETGFKFNDAVLRHLTVKLKKAETAPSPMMKAVQKEDAAKSHRSEAP 120 Query: 120 AA 121 AA Sbjct: 121 AA 122 >ref|ZP_04579095.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13] gb|EEO30068.1| small subunit ribosomal protein S6 [Oxalobacter formigenes OXCC13] Length = 121 Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 94/121 (77%), Positives = 104/121 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK VTTRGGK+HRVEDWGRRQLAY I K AKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKNSVTTRGGKIHRVEDWGRRQLAYMINKFAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 +NIE D ETL E+ET FKFNDA+LRHLTVKMK AETGPSP++K+ QKE+A K+ E + Sbjct: 61 LMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEEAPKAAAEQAS 120 Query: 121 A 121 A Sbjct: 121 A 121 >ref|ZP_04576338.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS] gb|EEO27300.1| small subunit ribosomal protein S6 [Oxalobacter formigenes HOxBLS] Length = 125 Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 94/120 (78%), Positives = 105/120 (87%), Gaps = 2/120 (1%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK VT+RGGK+HRVEDWGRRQLAY I K AKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKNSVTSRGGKIHRVEDWGRRQLAYMINKFAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 +NIE D ETL E+ET FKFNDA+LRHLTVKMK AETGPSP++K+ QKE++AK+ APA Sbjct: 61 LMNIECDGETLNELETAFKFNDAILRHLTVKMKHAETGPSPMMKSAQKEESAKA--PAPA 118 >ref|ZP_03269156.1| ribosomal protein S6 [Burkholderia sp. H160] gb|EDZ99270.1| ribosomal protein S6 [Burkholderia sp. H160] Length = 124 Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 91/119 (76%), Positives = 103/119 (86%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYKG +T+ GG++HRVEDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAP 119 C+NIE D TL E+E FKFNDAVLRHL VK+KKAETGPSP++K VQ+E+A KS P Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKLKKAETGPSPMMKEVQREEAKKSAAAQP 119 >ref|YP_558569.1| 30S ribosomal protein S6 [Burkholderia xenovorans LB400] ref|ZP_02883455.1| ribosomal protein S6 [Burkholderia graminis C4D1M] ref|YP_001895418.1| 30S ribosomal protein S6 [Burkholderia phytofirmans PsJN] ref|ZP_06840558.1| ribosomal protein S6 [Burkholderia sp. Ch1-1] ref|YP_003906761.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1003] ref|YP_004228344.1| 30S ribosomal protein S6 [Burkholderia sp. CCGE1001] sp|Q13ZH2.1|RS6_BURXL RecName: Full=30S ribosomal protein S6 sp|B2T3N3.1|RS6_BURPP RecName: Full=30S ribosomal protein S6 gb|ABE30517.1| SSU ribosomal protein S6P [Burkholderia xenovorans LB400] gb|EDT10887.1| ribosomal protein S6 [Burkholderia graminis C4D1M] gb|ACD16194.1| ribosomal protein S6 [Burkholderia phytofirmans PsJN] gb|EFG71754.1| ribosomal protein S6 [Burkholderia sp. Ch1-1] gb|ADN57470.1| ribosomal protein S6 [Burkholderia sp. CCGE1003] gb|ADX55284.1| ribosomal protein S6 [Burkholderia sp. CCGE1001] Length = 124 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 90/120 (75%), Positives = 103/120 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +T+ GG++HR+EDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKSTITSHGGQIHRIEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAPA 120 C+NIE D TL E+E FKFNDAVLRHL VKMKKAETGPSP++K VQ+E+A KS P+ Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREEAKKSAATQPS 120 >ref|YP_003604946.1| ribosomal protein S6 [Burkholderia sp. CCGE1002] gb|ADG15435.1| ribosomal protein S6 [Burkholderia sp. CCGE1002] Length = 124 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 91/119 (76%), Positives = 102/119 (85%) Query: 1 MRHYEIVFIVHPDQSEQVPAMIERYKGIVTTRGGKVHRVEDWGRRQLAYQIQKLAKAHYV 60 MRHYEIVFIVHPDQSEQVPAMIERYK +T+ GG++HRVEDWGRRQLAY I+KLAKAHYV Sbjct: 1 MRHYEIVFIVHPDQSEQVPAMIERYKSTITSHGGQIHRVEDWGRRQLAYMIEKLAKAHYV 60 Query: 61 CLNIEVDSETLAEIETGFKFNDAVLRHLTVKMKKAETGPSPILKAVQKEDAAKSRTEAP 119 C+NIE D TL E+E FKFNDAVLRHL VKMKKAETGPSP++K VQ+E+A KS P Sbjct: 61 CMNIECDQTTLDELEHAFKFNDAVLRHLIVKMKKAETGPSPMMKEVQREEAKKSAAAQP 119